RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 BCL11BQ9C0K0 894 aaPredicted RBP11.62□□□□□ -0.55
SPTA1-204ENST00000467387 XIRP1Q702N8 1843 aaKnown RBP11.62□□□□□ -0.55
SPTA1-204ENST00000467387 ROBO1Q9Y6N7 1651 aa11.62□□□□□ -0.55
SPTA1-204ENST00000467387 FAM135BQ49AJ0 1406 aa11.61□□□□□ -0.55
SPTA1-204ENST00000467387 ADGRB3O60242 1522 aa11.61□□□□□ -0.55
SPTA1-204ENST00000467387 CHGAP10645 457 aaKnown RBP11.61□□□□□ -0.55
SPTA1-204ENST00000467387 SLC26A8Q96RN1 970 aa11.61□□□□□ -0.55
SPTA1-204ENST00000467387 ANKRD30AQ9BXX3 1397 aa11.61□□□□□ -0.55
SPTA1-204ENST00000467387 NKTRP30414 1462 aaKnown RBP11.61□□□□□ -0.55
SPTA1-204ENST00000467387 MSH6P52701 1360 aa11.6□□□□□ -0.55
SPTA1-204ENST00000467387 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
SPTA1-204ENST00000467387 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
SPTA1-204ENST00000467387 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
SPTA1-204ENST00000467387 RGS17Q9UGC6 210 aaPredicted RBP11.6□□□□□ -0.55
SPTA1-204ENST00000467387 CHIC2Q9UKJ5 165 aa11.6□□□□□ -0.55
SPTA1-204ENST00000467387 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
SPTA1-204ENST00000467387 KCNA6P17658 529 aa11.59□□□□□ -0.55
SPTA1-204ENST00000467387 LMTK2Q8IWU2 1503 aa11.59□□□□□ -0.55
SPTA1-204ENST00000467387 FGD6Q6ZV73 1430 aa11.59□□□□□ -0.55
SPTA1-204ENST00000467387 C14orf37Q86TY3 774 aa11.58□□□□□ -0.56
SPTA1-204ENST00000467387 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
SPTA1-204ENST00000467387 NWD1Q149M9 1564 aa11.58□□□□□ -0.56
SPTA1-204ENST00000467387 LOC105371045A0A1W2PR82 267 aa11.57□□□□□ -0.56
SPTA1-204ENST00000467387 IDI1Q13907 227 aa11.57□□□□□ -0.56
SPTA1-204ENST00000467387 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
SPTA1-204ENST00000467387 POTEAQ6S8J7 498 aa11.56□□□□□ -0.56
SPTA1-204ENST00000467387 CABP2Q9NPB3 220 aa11.56□□□□□ -0.56
SPTA1-204ENST00000467387 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
SPTA1-204ENST00000467387 PHLPP1O60346 1717 aa11.55□□□□□ -0.56
SPTA1-204ENST00000467387 MEX3CQ5U5Q3 659 aaKnown RBP11.55□□□□□ -0.56
SPTA1-204ENST00000467387 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
SPTA1-204ENST00000467387 JCADQ9P266 1359 aa11.54□□□□□ -0.56
SPTA1-204ENST00000467387 NOS1P29475 1434 aa11.54□□□□□ -0.56
SPTA1-204ENST00000467387 SLC52A1Q9NWF4 448 aa11.54□□□□□ -0.56
SPTA1-204ENST00000467387 TET3O43151 1660 aa11.54□□□□□ -0.56
SPTA1-204ENST00000467387 FAM50AQ14320 339 aaKnown RBP11.53□□□□□ -0.56
SPTA1-204ENST00000467387 PLEKHG1Q9ULL1 1385 aa11.53□□□□□ -0.56
SPTA1-204ENST00000467387 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.56
SPTA1-204ENST00000467387 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.56
SPTA1-204ENST00000467387 RPRD2Q5VT52 1461 aaKnown RBP11.52□□□□□ -0.56
SPTA1-204ENST00000467387 SLAIN2Q9P270 581 aa11.52□□□□□ -0.57
SPTA1-204ENST00000467387 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
SPTA1-204ENST00000467387 ANKRD50Q9ULJ7 1429 aa11.51□□□□□ -0.57
SPTA1-204ENST00000467387 ADGRL2O95490 1459 aa11.51□□□□□ -0.57
SPTA1-204ENST00000467387 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
SPTA1-204ENST00000467387 ZFYVE9O95405 1425 aa11.5□□□□□ -0.57
SPTA1-204ENST00000467387 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
SPTA1-204ENST00000467387 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
SPTA1-204ENST00000467387 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
SPTA1-204ENST00000467387 ATF3P18847 181 aa11.48□□□□□ -0.57
SPTA1-204ENST00000467387 IER5LQ5T953 404 aa11.48□□□□□ -0.57
SPTA1-204ENST00000467387 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
SPTA1-204ENST00000467387 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPTA1-204ENST00000467387 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
SPTA1-204ENST00000467387 MYO5BQ9ULV0 1848 aa11.48□□□□□ -0.57
SPTA1-204ENST00000467387 LRP6O75581 1613 aa11.47□□□□□ -0.57
SPTA1-204ENST00000467387 DIP2AQ14689 1571 aa11.47□□□□□ -0.57
SPTA1-204ENST00000467387 SPATA31A6Q5VVP1 1343 aa11.47□□□□□ -0.57
SPTA1-204ENST00000467387 BBXQ8WY36 941 aaPredicted RBP11.47□□□□□ -0.57
SPTA1-204ENST00000467387 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.57
SPTA1-204ENST00000467387 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
SPTA1-204ENST00000467387 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.57
SPTA1-204ENST00000467387 CADPS2Q86UW7 1296 aa11.46□□□□□ -0.57
SPTA1-204ENST00000467387 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
SPTA1-204ENST00000467387 CHD2O14647 1828 aaKnown RBP11.46□□□□□ -0.58
SPTA1-204ENST00000467387 AHDC1Q5TGY3 1603 aaPredicted RBP11.45□□□□□ -0.58
SPTA1-204ENST00000467387 UNC13BO14795 1591 aa11.45□□□□□ -0.58
SPTA1-204ENST00000467387 TRPM2O94759 1503 aa11.45□□□□□ -0.58
SPTA1-204ENST00000467387 NCOA3Q9Y6Q9 1424 aa11.44□□□□□ -0.58
SPTA1-204ENST00000467387 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
SPTA1-204ENST00000467387 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
SPTA1-204ENST00000467387 SOX12O15370 315 aa11.44□□□□□ -0.58
SPTA1-204ENST00000467387 NUTM2AQ8IVF1 878 aaPredicted RBP11.44□□□□□ -0.58
SPTA1-204ENST00000467387 MFRPQ9BY79 579 aa11.44□□□□□ -0.58
SPTA1-204ENST00000467387 TBX22Q9Y458 520 aa11.44□□□□□ -0.58
SPTA1-204ENST00000467387 SHPRHQ149N8 1683 aa11.43□□□□□ -0.58
SPTA1-204ENST00000467387 C7P10643 843 aa11.43□□□□□ -0.58
SPTA1-204ENST00000467387 IRX5P78411 483 aaPredicted RBP11.43□□□□□ -0.58
SPTA1-204ENST00000467387 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.43□□□□□ -0.58
SPTA1-204ENST00000467387 ADAMTS13Q76LX8 1427 aa11.43□□□□□ -0.58
SPTA1-204ENST00000467387 PIK3R4Q99570 1358 aa11.42□□□□□ -0.58
SPTA1-204ENST00000467387 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
SPTA1-204ENST00000467387 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
SPTA1-204ENST00000467387 E9PCH4 1651 aa11.42□□□□□ -0.58
SPTA1-204ENST00000467387 FBXO22Q8NEZ5 403 aa11.41□□□□□ -0.58
SPTA1-204ENST00000467387 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
SPTA1-204ENST00000467387 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.58
SPTA1-204ENST00000467387 IQGAP3Q86VI3 1631 aa11.4□□□□□ -0.58
SPTA1-204ENST00000467387 RXRBP28702 533 aa11.4□□□□□ -0.58
SPTA1-204ENST00000467387 BRINP3Q76B58 766 aa11.4□□□□□ -0.58
SPTA1-204ENST00000467387 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
SPTA1-204ENST00000467387 DCCP43146 1447 aa11.39□□□□□ -0.59
SPTA1-204ENST00000467387 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
SPTA1-204ENST00000467387 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
SPTA1-204ENST00000467387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPTA1-204ENST00000467387 AMOTL2Q9Y2J4 779 aa11.39□□□□□ -0.59
SPTA1-204ENST00000467387 NUP155O75694 1391 aa11.39□□□□□ -0.59
SPTA1-204ENST00000467387 AFF2P51816 1311 aa11.38□□□□□ -0.59
SPTA1-204ENST00000467387 ITGAEP38570 1179 aa11.38□□□□□ -0.59
SPTA1-204ENST00000467387 NLRP6P59044 892 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms