RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 LRRC7Q96NW7 1537 aa20.67■□□□□ 0.9
DDX56-208ENST00000467318 TESK2Q96S53 571 aa20.65■□□□□ 0.9
DDX56-208ENST00000467318 C14orf37Q86TY3 774 aa20.64■□□□□ 0.9
DDX56-208ENST00000467318 C19orf44Q9H6X5 657 aa20.64■□□□□ 0.9
DDX56-208ENST00000467318 MINK1Q8N4C8 1332 aaPredicted RBP20.63■□□□□ 0.89
DDX56-208ENST00000467318 QRICH2Q9H0J4 1663 aa20.63■□□□□ 0.89
DDX56-208ENST00000467318 ADGRL3Q9HAR2 1447 aa20.63■□□□□ 0.89
DDX56-208ENST00000467318 XIRP1Q702N8 1843 aaKnown RBP20.63■□□□□ 0.89
DDX56-208ENST00000467318 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
DDX56-208ENST00000467318 TMF1P82094 1093 aa20.61■□□□□ 0.89
DDX56-208ENST00000467318 HIRIP3Q9BW71 556 aaPredicted RBP20.61■□□□□ 0.89
DDX56-208ENST00000467318 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
DDX56-208ENST00000467318 MSH6P52701 1360 aa20.6■□□□□ 0.89
DDX56-208ENST00000467318 ADGRB2O60241 1585 aa20.59■□□□□ 0.89
DDX56-208ENST00000467318 WASLO00401 505 aaPredicted RBP20.59■□□□□ 0.89
DDX56-208ENST00000467318 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
DDX56-208ENST00000467318 DCCP43146 1447 aa20.58■□□□□ 0.89
DDX56-208ENST00000467318 NALCNQ8IZF0 1738 aa20.58■□□□□ 0.88
DDX56-208ENST00000467318 CADPS2Q86UW7 1296 aa20.57■□□□□ 0.88
DDX56-208ENST00000467318 PUS7Q96PZ0 661 aaKnown RBP20.57■□□□□ 0.88
DDX56-208ENST00000467318 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
DDX56-208ENST00000467318 ATF3P18847 181 aa20.56■□□□□ 0.88
DDX56-208ENST00000467318 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
DDX56-208ENST00000467318 CDK19Q9BWU1 502 aa20.56■□□□□ 0.88
DDX56-208ENST00000467318 CDC42BPGQ6DT37 1551 aa20.56■□□□□ 0.88
DDX56-208ENST00000467318 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
DDX56-208ENST00000467318 TULP4Q9NRJ4 1543 aa20.54■□□□□ 0.88
DDX56-208ENST00000467318 IQSEC2Q5JU85 1478 aa20.54■□□□□ 0.88
DDX56-208ENST00000467318 DISP3Q9P2K9 1392 aa20.53■□□□□ 0.88
DDX56-208ENST00000467318 CERKQ8TCT0 537 aa20.52■□□□□ 0.88
DDX56-208ENST00000467318 CABP2Q9NPB3 220 aa20.51■□□□□ 0.87
DDX56-208ENST00000467318 NUTM2FA1L443 756 aa20.5■□□□□ 0.87
DDX56-208ENST00000467318 ATAD2Q6PL18 1390 aa20.5■□□□□ 0.87
DDX56-208ENST00000467318 C11orf95C9JLR9 678 aaPredicted RBP20.49■□□□□ 0.87
DDX56-208ENST00000467318 ANKARQ7Z5J8 1434 aa20.49■□□□□ 0.87
DDX56-208ENST00000467318 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
DDX56-208ENST00000467318 CCDC61Q9Y6R9 512 aa20.48■□□□□ 0.87
DDX56-208ENST00000467318 FMN2Q9NZ56 1722 aa20.47■□□□□ 0.87
DDX56-208ENST00000467318 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
DDX56-208ENST00000467318 KIF7Q2M1P5 1343 aa20.46■□□□□ 0.87
DDX56-208ENST00000467318 TOM1O60784 492 aa20.45■□□□□ 0.86
DDX56-208ENST00000467318 MST1RQ04912 1400 aa20.45■□□□□ 0.86
DDX56-208ENST00000467318 PRR36Q9H6K5 1346 aa20.45■□□□□ 0.86
DDX56-208ENST00000467318 ATP7BP35670 1465 aa20.45■□□□□ 0.86
DDX56-208ENST00000467318 C1orf167Q5SNV9 1468 aa20.44■□□□□ 0.86
DDX56-208ENST00000467318 WASHC2AQ641Q2 1341 aa20.44■□□□□ 0.86
DDX56-208ENST00000467318 CCDC7Q96M83 1385 aa20.44■□□□□ 0.86
DDX56-208ENST00000467318 NINLQ9Y2I6 1382 aa20.43■□□□□ 0.86
DDX56-208ENST00000467318 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
DDX56-208ENST00000467318 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
DDX56-208ENST00000467318 USP32Q8NFA0 1604 aa20.41■□□□□ 0.86
DDX56-208ENST00000467318 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
DDX56-208ENST00000467318 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
DDX56-208ENST00000467318 TMC1Q8TDI8 760 aa20.4■□□□□ 0.86
DDX56-208ENST00000467318 CABP1Q9NZU7 370 aa20.4■□□□□ 0.86
DDX56-208ENST00000467318 PPIP5K1Q6PFW1 1433 aa20.4■□□□□ 0.86
DDX56-208ENST00000467318 ITSN1Q15811 1721 aa20.4■□□□□ 0.86
DDX56-208ENST00000467318 UBAP1LF5GYI3 381 aa20.38■□□□□ 0.85
DDX56-208ENST00000467318 ORAI2Q96SN7 254 aa20.38■□□□□ 0.85
DDX56-208ENST00000467318 SLC12A5Q9H2X9 1139 aa20.38■□□□□ 0.85
DDX56-208ENST00000467318 PHF8Q9UPP1 1060 aa20.38■□□□□ 0.85
DDX56-208ENST00000467318 TOPAZ1Q8N9V7 1692 aa20.37■□□□□ 0.85
DDX56-208ENST00000467318 TERF2IPQ9NYB0 399 aa20.36■□□□□ 0.85
DDX56-208ENST00000467318 BRINP3Q76B58 766 aa20.35■□□□□ 0.85
DDX56-208ENST00000467318 PMFBP1Q8TBY8 1022 aa20.35■□□□□ 0.85
DDX56-208ENST00000467318 ZNF692Q9BU19 519 aaPredicted RBP20.35■□□□□ 0.85
DDX56-208ENST00000467318 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
DDX56-208ENST00000467318 PIP4K2BP78356 416 aa20.35■□□□□ 0.85
DDX56-208ENST00000467318 NGDNQ8NEJ9 315 aaKnown RBP20.35■□□□□ 0.85
DDX56-208ENST00000467318 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
DDX56-208ENST00000467318 ACEP12821 1306 aa20.34■□□□□ 0.85
DDX56-208ENST00000467318 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.85
DDX56-208ENST00000467318 ANKRD36BQ8N2N9 1353 aa20.33■□□□□ 0.84
DDX56-208ENST00000467318 KIF1AQ12756 1690 aa20.33■□□□□ 0.84
DDX56-208ENST00000467318 MYOM1P52179 1685 aa20.32■□□□□ 0.84
DDX56-208ENST00000467318 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
DDX56-208ENST00000467318 FOXO3O43524 673 aa20.32■□□□□ 0.84
DDX56-208ENST00000467318 CPSF1Q10570 1443 aaKnown RBP20.32■□□□□ 0.84
DDX56-208ENST00000467318 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
DDX56-208ENST00000467318 NPHP3Q7Z494 1330 aa20.31■□□□□ 0.84
DDX56-208ENST00000467318 PSME1Q06323 249 aa20.29■□□□□ 0.84
DDX56-208ENST00000467318 PANK3Q9H999 370 aa20.29■□□□□ 0.84
DDX56-208ENST00000467318 A0A1W2PP64 1363 aa20.29■□□□□ 0.84
DDX56-208ENST00000467318 CD163L1Q9NR16 1453 aa20.29■□□□□ 0.84
DDX56-208ENST00000467318 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
DDX56-208ENST00000467318 BRD4O60885 1362 aaPredicted RBP20.28■□□□□ 0.84
DDX56-208ENST00000467318 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
DDX56-208ENST00000467318 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
DDX56-208ENST00000467318 XPCQ01831 940 aaPredicted RBP20.26■□□□□ 0.83
DDX56-208ENST00000467318 USP6P35125 1406 aa20.26■□□□□ 0.83
DDX56-208ENST00000467318 KRT28Q7Z3Y7 464 aa20.25■□□□□ 0.83
DDX56-208ENST00000467318 AKAP12Q02952 1782 aa20.25■□□□□ 0.83
DDX56-208ENST00000467318 EDC4Q6P2E9 1401 aaKnown RBP20.23■□□□□ 0.83
DDX56-208ENST00000467318 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
DDX56-208ENST00000467318 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
DDX56-208ENST00000467318 KNSTRNQ9Y448 316 aa20.22■□□□□ 0.83
DDX56-208ENST00000467318 NHSL1Q5SYE7 1610 aa20.22■□□□□ 0.83
DDX56-208ENST00000467318 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
DDX56-208ENST00000467318 AHDC1Q5TGY3 1603 aaPredicted RBP20.22■□□□□ 0.83
DDX56-208ENST00000467318 MON2Q7Z3U7 1717 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms