RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 BIVM-ERCC5R4GMW8 1640 aa9.89□□□□□ -0.83
PTCD3-207ENST00000467273 ADGRL1O94910 1474 aa9.88□□□□□ -0.83
PTCD3-207ENST00000467273 FAM187AA6NFU0 413 aa9.88□□□□□ -0.83
PTCD3-207ENST00000467273 DGAT1O75907 488 aa9.88□□□□□ -0.83
PTCD3-207ENST00000467273 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
PTCD3-207ENST00000467273 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
PTCD3-207ENST00000467273 HECW2Q9P2P5 1572 aa9.88□□□□□ -0.83
PTCD3-207ENST00000467273 TSPOAP1O95153 1857 aa9.87□□□□□ -0.83
PTCD3-207ENST00000467273 TOP2BQ02880 1626 aa9.87□□□□□ -0.83
PTCD3-207ENST00000467273 POTECB2RU33 542 aa9.87□□□□□ -0.83
PTCD3-207ENST00000467273 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
PTCD3-207ENST00000467273 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
PTCD3-207ENST00000467273 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
PTCD3-207ENST00000467273 EYA1Q99502 592 aa9.87□□□□□ -0.83
PTCD3-207ENST00000467273 TNFRSF10AO00220 468 aa9.86□□□□□ -0.83
PTCD3-207ENST00000467273 S1PR4O95977 384 aa9.86□□□□□ -0.83
PTCD3-207ENST00000467273 ZNF697Q5TEC3 545 aa9.86□□□□□ -0.83
PTCD3-207ENST00000467273 GLI2P10070 1586 aa9.85□□□□□ -0.83
PTCD3-207ENST00000467273 ANKLE1Q8NAG6 615 aa9.85□□□□□ -0.83
PTCD3-207ENST00000467273 PRR20EP86478 221 aa9.84□□□□□ -0.83
PTCD3-207ENST00000467273 PRR20CP86479 221 aa9.84□□□□□ -0.83
PTCD3-207ENST00000467273 PRR20DP86480 221 aa9.84□□□□□ -0.83
PTCD3-207ENST00000467273 PRR20BP86481 221 aa9.84□□□□□ -0.83
PTCD3-207ENST00000467273 PRR20AP86496 221 aa9.84□□□□□ -0.83
PTCD3-207ENST00000467273 LIAT1Q6ZQX7 453 aa9.83□□□□□ -0.84
PTCD3-207ENST00000467273 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
PTCD3-207ENST00000467273 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
PTCD3-207ENST00000467273 FBXO41Q8TF61 875 aa9.82□□□□□ -0.84
PTCD3-207ENST00000467273 PLB1Q6P1J6 1458 aa9.82□□□□□ -0.84
PTCD3-207ENST00000467273 PPRC1Q5VV67 1664 aaKnown RBP9.81□□□□□ -0.84
PTCD3-207ENST00000467273 DNAJB2P25686 324 aa9.81□□□□□ -0.84
PTCD3-207ENST00000467273 KMT5BQ4FZB7 885 aa9.81□□□□□ -0.84
PTCD3-207ENST00000467273 ST8SIA5O15466 376 aa9.8□□□□□ -0.84
PTCD3-207ENST00000467273 CFHP08603 1231 aa9.8□□□□□ -0.84
PTCD3-207ENST00000467273 ABCC2Q92887 1545 aa9.8□□□□□ -0.84
PTCD3-207ENST00000467273 TEX14Q8IWB6 1497 aa9.79□□□□□ -0.84
PTCD3-207ENST00000467273 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
PTCD3-207ENST00000467273 ACTN4O43707 911 aaKnown RBP9.78□□□□□ -0.84
PTCD3-207ENST00000467273 GDF9O60383 454 aa9.78□□□□□ -0.84
PTCD3-207ENST00000467273 RBM46Q8TBY0 533 aaKnown RBP9.78□□□□□ -0.84
PTCD3-207ENST00000467273 PTPRGP23470 1445 aa9.77□□□□□ -0.85
PTCD3-207ENST00000467273 ASXL2Q76L83 1435 aa9.77□□□□□ -0.85
PTCD3-207ENST00000467273 ADH1BP00325 375 aa9.77□□□□□ -0.85
PTCD3-207ENST00000467273 TMEM134Q9H6X4 195 aa9.77□□□□□ -0.85
PTCD3-207ENST00000467273 MAP3K4Q9Y6R4 1608 aa9.76□□□□□ -0.85
PTCD3-207ENST00000467273 SLC6A16Q9GZN6 736 aa9.76□□□□□ -0.85
PTCD3-207ENST00000467273 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
PTCD3-207ENST00000467273 NR1I2O75469 434 aa9.75□□□□□ -0.85
PTCD3-207ENST00000467273 FOXC1Q12948 553 aa9.75□□□□□ -0.85
PTCD3-207ENST00000467273 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
PTCD3-207ENST00000467273 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
PTCD3-207ENST00000467273 CARMIL2Q6F5E8 1435 aa9.74□□□□□ -0.85
PTCD3-207ENST00000467273 CUL7Q14999 1698 aa9.74□□□□□ -0.85
PTCD3-207ENST00000467273 COL17A1Q9UMD9 1497 aaPredicted RBP9.74□□□□□ -0.85
PTCD3-207ENST00000467273 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
PTCD3-207ENST00000467273 TREML4Q6UXN2 200 aa9.74□□□□□ -0.85
PTCD3-207ENST00000467273 TNIKQ9UKE5 1360 aa9.74□□□□□ -0.85
PTCD3-207ENST00000467273 RCCD1A6NED2 376 aa9.73□□□□□ -0.85
PTCD3-207ENST00000467273 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
PTCD3-207ENST00000467273 PTGDRQ13258 359 aa9.73□□□□□ -0.85
PTCD3-207ENST00000467273 BCANQ96GW7 911 aa9.73□□□□□ -0.85
PTCD3-207ENST00000467273 ADGRG1Q9Y653 693 aa9.73□□□□□ -0.85
PTCD3-207ENST00000467273 EPRSP07814 1512 aaKnown RBP9.72□□□□□ -0.85
PTCD3-207ENST00000467273 KDM5BQ9UGL1 1544 aa9.71□□□□□ -0.86
PTCD3-207ENST00000467273 SLC10A3P09131 477 aa9.7□□□□□ -0.86
PTCD3-207ENST00000467273 UACAQ9BZF9 1416 aa9.7□□□□□ -0.86
PTCD3-207ENST00000467273 NUTM2FA1L443 756 aa9.68□□□□□ -0.86
PTCD3-207ENST00000467273 PUS10Q3MIT2 529 aaKnown RBP9.68□□□□□ -0.86
PTCD3-207ENST00000467273 PKD2L1Q9P0L9 805 aa9.68□□□□□ -0.86
PTCD3-207ENST00000467273 IGF1RP08069 1367 aa9.67□□□□□ -0.86
PTCD3-207ENST00000467273 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
PTCD3-207ENST00000467273 SCUBE3Q8IX30 993 aa9.67□□□□□ -0.86
PTCD3-207ENST00000467273 KIF27Q86VH2 1401 aa9.66□□□□□ -0.86
PTCD3-207ENST00000467273 SPSB2Q99619 263 aa9.66□□□□□ -0.86
PTCD3-207ENST00000467273 DACH1Q9UI36 760 aa9.66□□□□□ -0.86
PTCD3-207ENST00000467273 IQGAP2Q13576 1575 aa9.66□□□□□ -0.86
PTCD3-207ENST00000467273 MAGI3Q5TCQ9 1506 aa9.66□□□□□ -0.86
PTCD3-207ENST00000467273 LMTK3Q96Q04 1460 aa9.66□□□□□ -0.86
PTCD3-207ENST00000467273 ZCCHC11Q5TAX3 1644 aaKnown RBP9.65□□□□□ -0.86
PTCD3-207ENST00000467273 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.86
PTCD3-207ENST00000467273 CFAP43Q8NDM7 1665 aa9.64□□□□□ -0.87
PTCD3-207ENST00000467273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
PTCD3-207ENST00000467273 GMPR2Q9P2T1 348 aaKnown RBP9.64□□□□□ -0.87
PTCD3-207ENST00000467273 WDR7Q9Y4E6 1490 aa9.64□□□□□ -0.87
PTCD3-207ENST00000467273 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
PTCD3-207ENST00000467273 AXIN1O15169 862 aa9.63□□□□□ -0.87
PTCD3-207ENST00000467273 WFS1O76024 890 aa9.63□□□□□ -0.87
PTCD3-207ENST00000467273 CYP4X1Q8N118 509 aa9.63□□□□□ -0.87
PTCD3-207ENST00000467273 CRIPAKQ8N1N5 446 aa9.62□□□□□ -0.87
PTCD3-207ENST00000467273 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
PTCD3-207ENST00000467273 FCF1Q9Y324 198 aaKnown RBP9.62□□□□□ -0.87
PTCD3-207ENST00000467273 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
PTCD3-207ENST00000467273 RSPH4AQ5TD94 716 aa9.61□□□□□ -0.87
PTCD3-207ENST00000467273 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
PTCD3-207ENST00000467273 KIF21BO75037 1637 aa9.6□□□□□ -0.87
PTCD3-207ENST00000467273 PTPRMP28827 1452 aa9.6□□□□□ -0.87
PTCD3-207ENST00000467273 CD109Q6YHK3 1445 aa9.6□□□□□ -0.87
PTCD3-207ENST00000467273 RPIAP49247 311 aa9.6□□□□□ -0.87
PTCD3-207ENST00000467273 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
PTCD3-207ENST00000467273 ADAMTSL3P82987 1691 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms