RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 FBLN2P98095 1184 aa19.84■□□□□ 0.77
CHD1L-205ENST00000467213 RWDD1Q9H446 243 aaPredicted RBP19.84■□□□□ 0.77
CHD1L-205ENST00000467213 UHRF1BP1LA0JNW5 1464 aa19.83■□□□□ 0.77
CHD1L-205ENST00000467213 RUNDC1Q96C34 613 aa19.83■□□□□ 0.77
CHD1L-205ENST00000467213 ADGRB2O60241 1585 aa19.83■□□□□ 0.76
CHD1L-205ENST00000467213 TBC1D2Q9BYX2 928 aa19.83■□□□□ 0.76
CHD1L-205ENST00000467213 INO80Q9ULG1 1556 aaPredicted RBP19.82■□□□□ 0.76
CHD1L-205ENST00000467213 EFCAB2Q5VUJ9 269 aa19.82■□□□□ 0.76
CHD1L-205ENST00000467213 COG6Q9Y2V7 657 aa19.82■□□□□ 0.76
CHD1L-205ENST00000467213 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
CHD1L-205ENST00000467213 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
CHD1L-205ENST00000467213 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
CHD1L-205ENST00000467213 PANK1Q8TE04 598 aa19.8■□□□□ 0.76
CHD1L-205ENST00000467213 MCM4P33991 863 aa19.79■□□□□ 0.76
CHD1L-205ENST00000467213 CLCN1P35523 988 aa19.79■□□□□ 0.76
CHD1L-205ENST00000467213 GOLGA6L3A6NEY3 463 aa19.79■□□□□ 0.76
CHD1L-205ENST00000467213 CHMP5Q9NZZ3 219 aa19.79■□□□□ 0.76
CHD1L-205ENST00000467213 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
CHD1L-205ENST00000467213 TRAPPC8Q9Y2L5 1435 aa19.79■□□□□ 0.76
CHD1L-205ENST00000467213 NCOA3Q9Y6Q9 1424 aa19.79■□□□□ 0.76
CHD1L-205ENST00000467213 PUS7Q96PZ0 661 aaKnown RBP19.78■□□□□ 0.76
CHD1L-205ENST00000467213 RRAGDQ9NQL2 400 aaPredicted RBP19.78■□□□□ 0.76
CHD1L-205ENST00000467213 PDZRN3Q9UPQ7 1066 aa19.78■□□□□ 0.76
CHD1L-205ENST00000467213 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
CHD1L-205ENST00000467213 PCDHB15Q9Y5E8 787 aa19.78■□□□□ 0.76
CHD1L-205ENST00000467213 FANCAO15360 1455 aa19.76■□□□□ 0.75
CHD1L-205ENST00000467213 LMTK2Q8IWU2 1503 aa19.76■□□□□ 0.75
CHD1L-205ENST00000467213 NSD2O96028 1365 aa19.76■□□□□ 0.75
CHD1L-205ENST00000467213 MROH1Q8NDA8 1641 aa19.76■□□□□ 0.75
CHD1L-205ENST00000467213 XRCC6P12956 609 aaKnown RBP eCLIP19.75■□□□□ 0.75
CHD1L-205ENST00000467213 SLKQ9H2G2 1235 aaPredicted RBP19.75■□□□□ 0.75
CHD1L-205ENST00000467213 MRE11P49959 708 aa19.75■□□□□ 0.75
CHD1L-205ENST00000467213 CHD1O14646 1710 aa19.74■□□□□ 0.75
CHD1L-205ENST00000467213 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
CHD1L-205ENST00000467213 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
CHD1L-205ENST00000467213 MYH16Q9H6N6 1097 aa19.74■□□□□ 0.75
CHD1L-205ENST00000467213 EFCAB6Q5THR3 1501 aa19.74■□□□□ 0.75
CHD1L-205ENST00000467213 MVPQ14764 893 aaKnown RBP19.73■□□□□ 0.75
CHD1L-205ENST00000467213 DDX11L8A8MPP1 907 aa19.73■□□□□ 0.75
CHD1L-205ENST00000467213 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
CHD1L-205ENST00000467213 ATP7AQ04656 1500 aa19.73■□□□□ 0.75
CHD1L-205ENST00000467213 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
CHD1L-205ENST00000467213 PTMSP20962 102 aa19.72■□□□□ 0.75
CHD1L-205ENST00000467213 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
CHD1L-205ENST00000467213 DDIT3P35638 169 aa19.71■□□□□ 0.75
CHD1L-205ENST00000467213 SNX21Q969T3 373 aa19.71■□□□□ 0.75
CHD1L-205ENST00000467213 ABCA9Q8IUA7 1624 aa19.7■□□□□ 0.74
CHD1L-205ENST00000467213 MROH2AA6NES4 1674 aa19.7■□□□□ 0.74
CHD1L-205ENST00000467213 RLBP1P12271 317 aa19.7■□□□□ 0.74
CHD1L-205ENST00000467213 TCP11L2Q8N4U5 519 aa19.7■□□□□ 0.74
CHD1L-205ENST00000467213 CIZ1Q9ULV3 898 aaPredicted RBP19.7■□□□□ 0.74
CHD1L-205ENST00000467213 NSD3Q9BZ95 1437 aa19.7■□□□□ 0.74
CHD1L-205ENST00000467213 C22orf23Q9BZE7 217 aa19.7■□□□□ 0.74
CHD1L-205ENST00000467213 PPLO60437 1756 aa19.69■□□□□ 0.74
CHD1L-205ENST00000467213 PPRC1Q5VV67 1664 aaKnown RBP19.68■□□□□ 0.74
CHD1L-205ENST00000467213 ZKSCAN2Q63HK3 967 aa19.68■□□□□ 0.74
CHD1L-205ENST00000467213 ZNF692Q9BU19 519 aaPredicted RBP19.68■□□□□ 0.74
CHD1L-205ENST00000467213 REREQ9P2R6 1566 aa19.68■□□□□ 0.74
CHD1L-205ENST00000467213 TRAK2O60296 914 aa19.67■□□□□ 0.74
CHD1L-205ENST00000467213 RBM25P49756 843 aaKnown RBP19.67■□□□□ 0.74
CHD1L-205ENST00000467213 CFAP53Q96M91 514 aa19.67■□□□□ 0.74
CHD1L-205ENST00000467213 ADGRB1O14514 1584 aa19.67■□□□□ 0.74
CHD1L-205ENST00000467213 MORC1Q86VD1 984 aa19.66■□□□□ 0.74
CHD1L-205ENST00000467213 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
CHD1L-205ENST00000467213 GLIPR1L2Q4G1C9 344 aa19.66■□□□□ 0.74
CHD1L-205ENST00000467213 IL16Q14005 1332 aa19.65■□□□□ 0.74
CHD1L-205ENST00000467213 CFAP70Q5T0N1 1121 aa19.65■□□□□ 0.74
CHD1L-205ENST00000467213 DZIP1LQ8IYY4 767 aaKnown RBP19.65■□□□□ 0.74
CHD1L-205ENST00000467213 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
CHD1L-205ENST00000467213 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.73
CHD1L-205ENST00000467213 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
CHD1L-205ENST00000467213 SKOR2Q2VWA4 1001 aaPredicted RBP19.63■□□□□ 0.73
CHD1L-205ENST00000467213 RRP9O43818 475 aaKnown RBP19.63■□□□□ 0.73
CHD1L-205ENST00000467213 ADGRF5Q8IZF2 1346 aa19.63■□□□□ 0.73
CHD1L-205ENST00000467213 HSCBQ8IWL3 235 aa19.62■□□□□ 0.73
CHD1L-205ENST00000467213 ARHGAP31Q2M1Z3 1444 aa19.62■□□□□ 0.73
CHD1L-205ENST00000467213 KIF16BQ96L93 1317 aa19.62■□□□□ 0.73
CHD1L-205ENST00000467213 ANKRD26Q9UPS8 1709 aa19.61■□□□□ 0.73
CHD1L-205ENST00000467213 GRPEL1Q9HAV7 217 aa19.61■□□□□ 0.73
CHD1L-205ENST00000467213 NOS1P29475 1434 aa19.6■□□□□ 0.73
CHD1L-205ENST00000467213 ANKRD36BQ8N2N9 1353 aa19.59■□□□□ 0.73
CHD1L-205ENST00000467213 CFAP74Q9C0B2 1584 aa19.59■□□□□ 0.73
CHD1L-205ENST00000467213 MED14O60244 1454 aa19.59■□□□□ 0.73
CHD1L-205ENST00000467213 IBTKQ9P2D0 1353 aaPredicted RBP19.59■□□□□ 0.73
CHD1L-205ENST00000467213 RPGRIP1LQ68CZ1 1315 aa19.58■□□□□ 0.73
CHD1L-205ENST00000467213 UGGT1Q9NYU2 1555 aa19.58■□□□□ 0.72
CHD1L-205ENST00000467213 CLEC17AQ6ZS10 378 aa19.58■□□□□ 0.72
CHD1L-205ENST00000467213 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.72
CHD1L-205ENST00000467213 C14orf93Q9H972 538 aaKnown RBP19.58■□□□□ 0.72
CHD1L-205ENST00000467213 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
CHD1L-205ENST00000467213 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
CHD1L-205ENST00000467213 GBP4Q96PP9 640 aa19.56■□□□□ 0.72
CHD1L-205ENST00000467213 TNNQ9UQP3 1299 aa19.56■□□□□ 0.72
CHD1L-205ENST00000467213 COL3A1P02461 1466 aaPredicted RBP19.56■□□□□ 0.72
CHD1L-205ENST00000467213 ARHGEF28Q8N1W1 1705 aaKnown RBP19.56■□□□□ 0.72
CHD1L-205ENST00000467213 MTHFSP49914 203 aa19.55■□□□□ 0.72
CHD1L-205ENST00000467213 ATF7IPQ6VMQ6 1270 aa19.55■□□□□ 0.72
CHD1L-205ENST00000467213 ZNF428Q96B54 188 aa19.55■□□□□ 0.72
CHD1L-205ENST00000467213 PANK2Q9BZ23 570 aa19.55■□□□□ 0.72
CHD1L-205ENST00000467213 ESPNB1AK53 854 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms