RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-205ENST00000467114 ZC3H15Q8WU90 426 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-205ENST00000467114 REPIN1Q9BWE0 567 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-205ENST00000467114 TNFRSF10AO00220 468 aa11.44□□□□□ -0.58
PRPF40A-205ENST00000467114 HLA-CQ95604 372 aa11.44□□□□□ -0.58
PRPF40A-205ENST00000467114 USB1Q9BQ65 265 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-205ENST00000467114 PKD2L1Q9P0L9 805 aa11.44□□□□□ -0.58
PRPF40A-205ENST00000467114 CD2BP2O95400 341 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-205ENST00000467114 PKDCCQ504Y2 493 aa11.42□□□□□ -0.58
PRPF40A-205ENST00000467114 DXOO77932 396 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-205ENST00000467114 MYT1Q01538 1121 aa11.4□□□□□ -0.58
PRPF40A-205ENST00000467114 AMHR2Q16671 573 aa11.4□□□□□ -0.58
PRPF40A-205ENST00000467114 SSTR3P32745 418 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-205ENST00000467114 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
PRPF40A-205ENST00000467114 ZBTB24O43167 697 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-205ENST00000467114 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
PRPF40A-205ENST00000467114 FOXC1Q12948 553 aa11.38□□□□□ -0.59
PRPF40A-205ENST00000467114 FAM187AA6NFU0 413 aa11.37□□□□□ -0.59
PRPF40A-205ENST00000467114 TTLL12Q14166 644 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-205ENST00000467114 TOR4AQ9NXH8 423 aa11.35□□□□□ -0.59
PRPF40A-205ENST00000467114 ZNF787Q6DD87 383 aa11.34□□□□□ -0.59
PRPF40A-205ENST00000467114 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
PRPF40A-205ENST00000467114 TRIM32Q13049 653 aa11.33□□□□□ -0.6
PRPF40A-205ENST00000467114 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
PRPF40A-205ENST00000467114 SYMPKQ92797 1274 aaKnown RBP11.33□□□□□ -0.6
PRPF40A-205ENST00000467114 FDX1P10109 184 aa11.32□□□□□ -0.6
PRPF40A-205ENST00000467114 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
PRPF40A-205ENST00000467114 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
PRPF40A-205ENST00000467114 WNT7AO00755 349 aa11.31□□□□□ -0.6
PRPF40A-205ENST00000467114 JUNDP17535 347 aa11.31□□□□□ -0.6
PRPF40A-205ENST00000467114 CYP4X1Q8N118 509 aa11.3□□□□□ -0.6
PRPF40A-205ENST00000467114 TRIM66O15016 1216 aa11.28□□□□□ -0.6
PRPF40A-205ENST00000467114 AVPP01185 164 aa11.28□□□□□ -0.6
PRPF40A-205ENST00000467114 CRIPAKQ8N1N5 446 aa11.28□□□□□ -0.6
PRPF40A-205ENST00000467114 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
PRPF40A-205ENST00000467114 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
PRPF40A-205ENST00000467114 MOXD2PA6NHM9 499 aa11.27□□□□□ -0.61
PRPF40A-205ENST00000467114 NDUFV2P19404 249 aa11.27□□□□□ -0.61
PRPF40A-205ENST00000467114 PARP9Q8IXQ6 854 aa11.27□□□□□ -0.61
PRPF40A-205ENST00000467114 AK7Q96M32 723 aa11.27□□□□□ -0.61
PRPF40A-205ENST00000467114 C6orf229H3BNL8 230 aa11.26□□□□□ -0.61
PRPF40A-205ENST00000467114 BEGAINQ9BUH8 593 aa11.26□□□□□ -0.61
PRPF40A-205ENST00000467114 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
PRPF40A-205ENST00000467114 SNIP1Q8TAD8 396 aaKnown RBP11.24□□□□□ -0.61
PRPF40A-205ENST00000467114 MRGPRX2Q96LB1 330 aa11.24□□□□□ -0.61
PRPF40A-205ENST00000467114 NUDT12Q9BQG2 462 aa11.24□□□□□ -0.61
PRPF40A-205ENST00000467114 TTC24A2A3L6 582 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-205ENST00000467114 GJA5P36382 358 aa11.23□□□□□ -0.61
PRPF40A-205ENST00000467114 WNT7BP56706 349 aa11.23□□□□□ -0.61
PRPF40A-205ENST00000467114 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
PRPF40A-205ENST00000467114 POTECB2RU33 542 aa11.22□□□□□ -0.61
PRPF40A-205ENST00000467114 MS4A1P11836 297 aa11.22□□□□□ -0.61
PRPF40A-205ENST00000467114 SKOR1P84550 965 aa11.22□□□□□ -0.61
PRPF40A-205ENST00000467114 SPDYE5A6NIY4 337 aa11.21□□□□□ -0.61
PRPF40A-205ENST00000467114 SMPD1P17405 629 aa11.21□□□□□ -0.61
PRPF40A-205ENST00000467114 SMCPP49901 116 aaPredicted RBP11.21□□□□□ -0.61
PRPF40A-205ENST00000467114 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
PRPF40A-205ENST00000467114 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
PRPF40A-205ENST00000467114 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
PRPF40A-205ENST00000467114 MTMR2Q13614 643 aa11.2□□□□□ -0.62
PRPF40A-205ENST00000467114 RC3H1Q5TC82 1133 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-205ENST00000467114 CCNYL3P0C7X3 344 aa11.19□□□□□ -0.62
PRPF40A-205ENST00000467114 PTPRNQ16849 979 aa11.19□□□□□ -0.62
PRPF40A-205ENST00000467114 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
PRPF40A-205ENST00000467114 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
PRPF40A-205ENST00000467114 PRR7Q8TB68 274 aa11.19□□□□□ -0.62
PRPF40A-205ENST00000467114 ZNF775Q96BV0 537 aaPredicted RBP11.19□□□□□ -0.62
PRPF40A-205ENST00000467114 AXIN1O15169 862 aa11.18□□□□□ -0.62
PRPF40A-205ENST00000467114 EVA1BQ9NVM1 165 aa11.17□□□□□ -0.62
PRPF40A-205ENST00000467114 DACH1Q9UI36 760 aa11.17□□□□□ -0.62
PRPF40A-205ENST00000467114 J3QL48 77 aa11.16□□□□□ -0.62
PRPF40A-205ENST00000467114 SPTLC1O15269 473 aa11.16□□□□□ -0.62
PRPF40A-205ENST00000467114 PDE4DQ08499 809 aa11.16□□□□□ -0.62
PRPF40A-205ENST00000467114 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
PRPF40A-205ENST00000467114 SLC24A3Q9HC58 644 aa11.14□□□□□ -0.63
PRPF40A-205ENST00000467114 KCNH2Q12809 1159 aa11.13□□□□□ -0.63
PRPF40A-205ENST00000467114 SIAH2O43255 324 aa11.12□□□□□ -0.63
PRPF40A-205ENST00000467114 SH3BP2P78314 561 aa11.12□□□□□ -0.63
PRPF40A-205ENST00000467114 PRPF38BQ5VTL8 546 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-205ENST00000467114 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
PRPF40A-205ENST00000467114 UNC93B1Q9H1C4 597 aa11.12□□□□□ -0.63
PRPF40A-205ENST00000467114 HRCP23327 699 aa11.11□□□□□ -0.63
PRPF40A-205ENST00000467114 ZBTB3Q9H5J0 574 aa11.11□□□□□ -0.63
PRPF40A-205ENST00000467114 CFAP99D6REC4 459 aa11.1□□□□□ -0.63
PRPF40A-205ENST00000467114 LYPD8Q6UX82 237 aa11.1□□□□□ -0.63
PRPF40A-205ENST00000467114 EHBP1Q8NDI1 1231 aa11.1□□□□□ -0.63
PRPF40A-205ENST00000467114 HPS1Q92902 700 aa11.1□□□□□ -0.63
PRPF40A-205ENST00000467114 GMPR2Q9P2T1 348 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-205ENST00000467114 ALDH1A1P00352 501 aa11.08□□□□□ -0.64
PRPF40A-205ENST00000467114 TUSC1Q2TAM9 212 aa11.08□□□□□ -0.64
PRPF40A-205ENST00000467114 MYSM1Q5VVJ2 828 aa11.08□□□□□ -0.64
PRPF40A-205ENST00000467114 BAP1Q92560 729 aa11.07□□□□□ -0.64
PRPF40A-205ENST00000467114 ATP13A2Q9NQ11 1180 aa11.06□□□□□ -0.64
PRPF40A-205ENST00000467114 LIMD1Q9UGP4 676 aa11.06□□□□□ -0.64
PRPF40A-205ENST00000467114 C11orf95C9JLR9 678 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-205ENST00000467114 LINC01559Q495D7 138 aa11.05□□□□□ -0.64
PRPF40A-205ENST00000467114 ZNF511Q8NB15 262 aa11.05□□□□□ -0.64
PRPF40A-205ENST00000467114 CABLES1Q8TDN4 633 aa11.05□□□□□ -0.64
PRPF40A-205ENST00000467114 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
PRPF40A-205ENST00000467114 CSPP1Q1MSJ5 1256 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms