RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GRIPAP1Q4V328 841 aa8.12□□□□□ -1.11
GTF3C3-209ENST00000466862 ZNF697Q5TEC3 545 aa8.12□□□□□ -1.11
GTF3C3-209ENST00000466862 Q3C1V9 767 aa8.11□□□□□ -1.11
GTF3C3-209ENST00000466862 DXOO77932 396 aaKnown RBP8.1□□□□□ -1.11
GTF3C3-209ENST00000466862 GIGYF2Q6Y7W6 1299 aaKnown RBP8.1□□□□□ -1.11
GTF3C3-209ENST00000466862 PKD2L1Q9P0L9 805 aa8.1□□□□□ -1.11
GTF3C3-209ENST00000466862 RPIAP49247 311 aa8.09□□□□□ -1.11
GTF3C3-209ENST00000466862 PARP9Q8IXQ6 854 aa8.09□□□□□ -1.11
GTF3C3-209ENST00000466862 ZNF775Q96BV0 537 aaPredicted RBP8.09□□□□□ -1.11
GTF3C3-209ENST00000466862 USB1Q9BQ65 265 aaKnown RBP8.08□□□□□ -1.12
GTF3C3-209ENST00000466862 POTECB2RU33 542 aa8.07□□□□□ -1.12
GTF3C3-209ENST00000466862 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
GTF3C3-209ENST00000466862 KRI1Q8N9T8 703 aaKnown RBP8.07□□□□□ -1.12
GTF3C3-209ENST00000466862 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
GTF3C3-209ENST00000466862 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
GTF3C3-209ENST00000466862 TRIM66O15016 1216 aa8.06□□□□□ -1.12
GTF3C3-209ENST00000466862 TTLL12Q14166 644 aaPredicted RBP8.06□□□□□ -1.12
GTF3C3-209ENST00000466862 SPIRE2Q8WWL2 714 aa8.06□□□□□ -1.12
GTF3C3-209ENST00000466862 MS4A1P11836 297 aa8.04□□□□□ -1.12
GTF3C3-209ENST00000466862 SYMPKQ92797 1274 aaKnown RBP8.04□□□□□ -1.12
GTF3C3-209ENST00000466862 JUNDP17535 347 aa8.03□□□□□ -1.12
GTF3C3-209ENST00000466862 MYT1Q01538 1121 aa8.03□□□□□ -1.12
GTF3C3-209ENST00000466862 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
GTF3C3-209ENST00000466862 NUTM1Q86Y26 1132 aa8.03□□□□□ -1.12
GTF3C3-209ENST00000466862 MOXD2PA6NHM9 499 aa8.02□□□□□ -1.13
GTF3C3-209ENST00000466862 DGAT1O75907 488 aa8.02□□□□□ -1.13
GTF3C3-209ENST00000466862 FDX1P10109 184 aa8.02□□□□□ -1.13
GTF3C3-209ENST00000466862 TRIM32Q13049 653 aa8.02□□□□□ -1.13
GTF3C3-209ENST00000466862 TOR4AQ9NXH8 423 aa8.02□□□□□ -1.13
GTF3C3-209ENST00000466862 AK7Q96M32 723 aa8.01□□□□□ -1.13
GTF3C3-209ENST00000466862 NDUFV2P19404 249 aa8□□□□□ -1.13
GTF3C3-209ENST00000466862 PKDCCQ504Y2 493 aa8□□□□□ -1.13
GTF3C3-209ENST00000466862 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
GTF3C3-209ENST00000466862 FAM187AA6NFU0 413 aa7.99□□□□□ -1.13
GTF3C3-209ENST00000466862 FOXC1Q12948 553 aa7.99□□□□□ -1.13
GTF3C3-209ENST00000466862 WNT7AO00755 349 aa7.98□□□□□ -1.13
GTF3C3-209ENST00000466862 GJA5P36382 358 aa7.98□□□□□ -1.13
GTF3C3-209ENST00000466862 PDE4DQ08499 809 aa7.98□□□□□ -1.13
GTF3C3-209ENST00000466862 RSBN1LQ6PCB5 846 aaPredicted RBP7.98□□□□□ -1.13
GTF3C3-209ENST00000466862 ST8SIA5O15466 376 aa7.97□□□□□ -1.13
GTF3C3-209ENST00000466862 CD2BP2O95400 341 aaKnown RBP7.97□□□□□ -1.13
GTF3C3-209ENST00000466862 SKOR1P84550 965 aa7.97□□□□□ -1.13
GTF3C3-209ENST00000466862 TBC1D2Q9BYX2 928 aa7.97□□□□□ -1.13
GTF3C3-209ENST00000466862 SLC24A3Q9HC58 644 aa7.97□□□□□ -1.13
GTF3C3-209ENST00000466862 AVPP01185 164 aa7.96□□□□□ -1.14
GTF3C3-209ENST00000466862 CRIPAKQ8N1N5 446 aa7.96□□□□□ -1.14
GTF3C3-209ENST00000466862 C6orf229H3BNL8 230 aa7.95□□□□□ -1.14
GTF3C3-209ENST00000466862 ZBTB24O43167 697 aaPredicted RBP7.95□□□□□ -1.14
GTF3C3-209ENST00000466862 NUDT12Q9BQG2 462 aa7.95□□□□□ -1.14
GTF3C3-209ENST00000466862 SPTLC1O15269 473 aa7.94□□□□□ -1.14
GTF3C3-209ENST00000466862 MTMR2Q13614 643 aa7.94□□□□□ -1.14
GTF3C3-209ENST00000466862 PTPRNQ16849 979 aa7.94□□□□□ -1.14
GTF3C3-209ENST00000466862 DESI1Q6ICB0 168 aa7.94□□□□□ -1.14
GTF3C3-209ENST00000466862 PTCRAQ6ISU1 281 aaPredicted RBP7.94□□□□□ -1.14
GTF3C3-209ENST00000466862 AAASQ9NRG9 546 aa7.94□□□□□ -1.14
GTF3C3-209ENST00000466862 CCNYL3P0C7X3 344 aa7.93□□□□□ -1.14
GTF3C3-209ENST00000466862 WNT7BP56706 349 aa7.93□□□□□ -1.14
GTF3C3-209ENST00000466862 PRR7Q8TB68 274 aa7.93□□□□□ -1.14
GTF3C3-209ENST00000466862 MRGPRX2Q96LB1 330 aa7.93□□□□□ -1.14
GTF3C3-209ENST00000466862 SMPD1P17405 629 aa7.92□□□□□ -1.14
GTF3C3-209ENST00000466862 DIXDC1Q155Q3 683 aa7.92□□□□□ -1.14
GTF3C3-209ENST00000466862 CCDC24Q8N4L8 307 aa7.92□□□□□ -1.14
GTF3C3-209ENST00000466862 PCDHB15Q9Y5E8 787 aa7.92□□□□□ -1.14
GTF3C3-209ENST00000466862 SPDYE5A6NIY4 337 aa7.91□□□□□ -1.14
GTF3C3-209ENST00000466862 CFAP99D6REC4 459 aa7.91□□□□□ -1.14
GTF3C3-209ENST00000466862 MYSM1Q5VVJ2 828 aa7.91□□□□□ -1.14
GTF3C3-209ENST00000466862 CYP4X1Q8N118 509 aa7.91□□□□□ -1.14
GTF3C3-209ENST00000466862 LIMD1Q9UGP4 676 aa7.91□□□□□ -1.14
GTF3C3-209ENST00000466862 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
GTF3C3-209ENST00000466862 SMCPP49901 116 aaPredicted RBP7.9□□□□□ -1.14
GTF3C3-209ENST00000466862 TUSC1Q2TAM9 212 aa7.9□□□□□ -1.14
GTF3C3-209ENST00000466862 SNIP1Q8TAD8 396 aaKnown RBP7.9□□□□□ -1.14
GTF3C3-209ENST00000466862 SLC24A1O60721 1099 aa7.89□□□□□ -1.15
GTF3C3-209ENST00000466862 HRCP23327 699 aa7.89□□□□□ -1.15
GTF3C3-209ENST00000466862 RC3H1Q5TC82 1133 aaKnown RBP7.89□□□□□ -1.15
GTF3C3-209ENST00000466862 PRPF38BQ5VTL8 546 aaKnown RBP7.89□□□□□ -1.15
GTF3C3-209ENST00000466862 J3QL48 77 aa7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 F12P00748 615 aaPredicted RBP7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 CTC1Q2NKJ3 1217 aa7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 LCE2AQ5TA79 106 aaPredicted RBP7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 CABLES1Q8TDN4 633 aa7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 UNC93B1Q9H1C4 597 aa7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 ZBTB3Q9H5J0 574 aa7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 EVA1BQ9NVM1 165 aa7.88□□□□□ -1.15
GTF3C3-209ENST00000466862 KCNH2Q12809 1159 aa7.87□□□□□ -1.15
GTF3C3-209ENST00000466862 QPCTQ16769 361 aa7.87□□□□□ -1.15
GTF3C3-209ENST00000466862 TTC24A2A3L6 582 aaPredicted RBP7.86□□□□□ -1.15
GTF3C3-209ENST00000466862 SIAH2O43255 324 aa7.86□□□□□ -1.15
GTF3C3-209ENST00000466862 SH3BP2P78314 561 aa7.86□□□□□ -1.15
GTF3C3-209ENST00000466862 LYPD8Q6UX82 237 aa7.86□□□□□ -1.15
GTF3C3-209ENST00000466862 BCANQ96GW7 911 aa7.86□□□□□ -1.15
GTF3C3-209ENST00000466862 LILRB3O75022 631 aa7.85□□□□□ -1.15
GTF3C3-209ENST00000466862 TREML4Q6UXN2 200 aa7.84□□□□□ -1.15
GTF3C3-209ENST00000466862 MAP10Q9P2G4 905 aa7.84□□□□□ -1.15
GTF3C3-209ENST00000466862 AXIN1O15169 862 aa7.83□□□□□ -1.16
GTF3C3-209ENST00000466862 PER1O15534 1290 aaPredicted RBP7.83□□□□□ -1.16
GTF3C3-209ENST00000466862 CLK2P49760 499 aaKnown RBP7.83□□□□□ -1.16
GTF3C3-209ENST00000466862 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
GTF3C3-209ENST00000466862 ZNF511Q8NB15 262 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms