RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 BARGINQ6ZT62 677 aa8.98□□□□□ -0.97
CCDC58-203ENST00000466854 PKD2L1Q9P0L9 805 aa8.98□□□□□ -0.97
CCDC58-203ENST00000466854 RPIAP49247 311 aa8.97□□□□□ -0.97
CCDC58-203ENST00000466854 USP46P62068 366 aa8.97□□□□□ -0.97
CCDC58-203ENST00000466854 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
CCDC58-203ENST00000466854 Q3C1V9 767 aa8.97□□□□□ -0.97
CCDC58-203ENST00000466854 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
CCDC58-203ENST00000466854 MMP16P51512 607 aa8.95□□□□□ -0.98
CCDC58-203ENST00000466854 USB1Q9BQ65 265 aaKnown RBP8.94□□□□□ -0.98
CCDC58-203ENST00000466854 DGAT1O75907 488 aa8.93□□□□□ -0.98
CCDC58-203ENST00000466854 DXOO77932 396 aaKnown RBP8.93□□□□□ -0.98
CCDC58-203ENST00000466854 MYT1Q01538 1121 aa8.93□□□□□ -0.98
CCDC58-203ENST00000466854 FOXC1Q12948 553 aa8.93□□□□□ -0.98
CCDC58-203ENST00000466854 PKDCCQ504Y2 493 aa8.93□□□□□ -0.98
CCDC58-203ENST00000466854 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
CCDC58-203ENST00000466854 AMHR2Q16671 573 aa8.92□□□□□ -0.98
CCDC58-203ENST00000466854 FAM187AA6NFU0 413 aa8.91□□□□□ -0.98
CCDC58-203ENST00000466854 SSTR3P32745 418 aaPredicted RBP8.91□□□□□ -0.98
CCDC58-203ENST00000466854 SYMPKQ92797 1274 aaKnown RBP8.91□□□□□ -0.98
CCDC58-203ENST00000466854 CD2BP2O95400 341 aaKnown RBP8.9□□□□□ -0.98
CCDC58-203ENST00000466854 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
CCDC58-203ENST00000466854 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
CCDC58-203ENST00000466854 TOR4AQ9NXH8 423 aa8.89□□□□□ -0.99
CCDC58-203ENST00000466854 PCDHGC3Q9UN70 934 aa8.89□□□□□ -0.99
CCDC58-203ENST00000466854 TRIM32Q13049 653 aa8.88□□□□□ -0.99
CCDC58-203ENST00000466854 GIGYF2Q6Y7W6 1299 aaKnown RBP8.88□□□□□ -0.99
CCDC58-203ENST00000466854 SPIRE2Q8WWL2 714 aa8.88□□□□□ -0.99
CCDC58-203ENST00000466854 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
CCDC58-203ENST00000466854 FDX1P10109 184 aa8.86□□□□□ -0.99
CCDC58-203ENST00000466854 ST8SIA5O15466 376 aa8.85□□□□□ -0.99
CCDC58-203ENST00000466854 SLC24A1O60721 1099 aa8.85□□□□□ -0.99
CCDC58-203ENST00000466854 JUNDP17535 347 aa8.85□□□□□ -0.99
CCDC58-203ENST00000466854 RETREG3Q86VR2 466 aa8.85□□□□□ -0.99
CCDC58-203ENST00000466854 PARP9Q8IXQ6 854 aa8.85□□□□□ -0.99
CCDC58-203ENST00000466854 MOXD2PA6NHM9 499 aa8.84□□□□□ -0.99
CCDC58-203ENST00000466854 WNT7AO00755 349 aa8.84□□□□□ -0.99
CCDC58-203ENST00000466854 TRIM66O15016 1216 aa8.84□□□□□ -0.99
CCDC58-203ENST00000466854 NDUFV2P19404 249 aa8.84□□□□□ -0.99
CCDC58-203ENST00000466854 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
CCDC58-203ENST00000466854 STK17AQ9UEE5 414 aa8.84□□□□□ -0.99
CCDC58-203ENST00000466854 POTECB2RU33 542 aa8.83□□□□□ -1
CCDC58-203ENST00000466854 CYP4X1Q8N118 509 aa8.83□□□□□ -1
CCDC58-203ENST00000466854 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
CCDC58-203ENST00000466854 AVPP01185 164 aa8.82□□□□□ -1
CCDC58-203ENST00000466854 SKOR1P84550 965 aa8.82□□□□□ -1
CCDC58-203ENST00000466854 BEGAINQ9BUH8 593 aa8.82□□□□□ -1
CCDC58-203ENST00000466854 C6orf229H3BNL8 230 aa8.81□□□□□ -1
CCDC58-203ENST00000466854 MS4A1P11836 297 aa8.81□□□□□ -1
CCDC58-203ENST00000466854 CRIPAKQ8N1N5 446 aa8.81□□□□□ -1
CCDC58-203ENST00000466854 MRGPRX2Q96LB1 330 aa8.81□□□□□ -1
CCDC58-203ENST00000466854 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
CCDC58-203ENST00000466854 AK7Q96M32 723 aa8.8□□□□□ -1
CCDC58-203ENST00000466854 NUDT12Q9BQG2 462 aa8.8□□□□□ -1
CCDC58-203ENST00000466854 SUZ12Q15022 739 aaKnown RBP8.79□□□□□ -1
CCDC58-203ENST00000466854 DACH1Q9UI36 760 aa8.79□□□□□ -1
CCDC58-203ENST00000466854 TTC24A2A3L6 582 aaPredicted RBP8.78□□□□□ -1
CCDC58-203ENST00000466854 SMPD1P17405 629 aa8.78□□□□□ -1
CCDC58-203ENST00000466854 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
CCDC58-203ENST00000466854 TBC1D2Q9BYX2 928 aa8.78□□□□□ -1
CCDC58-203ENST00000466854 WNT7BP56706 349 aa8.77□□□□□ -1.01
CCDC58-203ENST00000466854 RC3H1Q5TC82 1133 aaKnown RBP8.77□□□□□ -1.01
CCDC58-203ENST00000466854 J3QL48 77 aa8.76□□□□□ -1.01
CCDC58-203ENST00000466854 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
CCDC58-203ENST00000466854 RSBN1LQ6PCB5 846 aaPredicted RBP8.76□□□□□ -1.01
CCDC58-203ENST00000466854 PRR7Q8TB68 274 aa8.76□□□□□ -1.01
CCDC58-203ENST00000466854 GJA5P36382 358 aa8.75□□□□□ -1.01
CCDC58-203ENST00000466854 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
CCDC58-203ENST00000466854 MTMR2Q13614 643 aa8.75□□□□□ -1.01
CCDC58-203ENST00000466854 PTPRNQ16849 979 aa8.75□□□□□ -1.01
CCDC58-203ENST00000466854 CTC1Q2NKJ3 1217 aa8.75□□□□□ -1.01
CCDC58-203ENST00000466854 PCDHB15Q9Y5E8 787 aa8.75□□□□□ -1.01
CCDC58-203ENST00000466854 AXIN1O15169 862 aa8.74□□□□□ -1.01
CCDC58-203ENST00000466854 PDE4DQ08499 809 aa8.74□□□□□ -1.01
CCDC58-203ENST00000466854 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
CCDC58-203ENST00000466854 SPTLC1O15269 473 aa8.73□□□□□ -1.01
CCDC58-203ENST00000466854 DESI1Q6ICB0 168 aa8.73□□□□□ -1.01
CCDC58-203ENST00000466854 EVA1BQ9NVM1 165 aa8.73□□□□□ -1.01
CCDC58-203ENST00000466854 SPDYE5A6NIY4 337 aa8.72□□□□□ -1.01
CCDC58-203ENST00000466854 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
CCDC58-203ENST00000466854 CFAP99D6REC4 459 aa8.71□□□□□ -1.02
CCDC58-203ENST00000466854 SIAH2O43255 324 aa8.71□□□□□ -1.02
CCDC58-203ENST00000466854 SH3BP2P78314 561 aa8.71□□□□□ -1.02
CCDC58-203ENST00000466854 HPS1Q92902 700 aa8.71□□□□□ -1.02
CCDC58-203ENST00000466854 UNC93B1Q9H1C4 597 aa8.71□□□□□ -1.02
CCDC58-203ENST00000466854 GMPR2Q9P2T1 348 aaKnown RBP8.71□□□□□ -1.02
CCDC58-203ENST00000466854 HRCP23327 699 aa8.7□□□□□ -1.02
CCDC58-203ENST00000466854 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
CCDC58-203ENST00000466854 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
CCDC58-203ENST00000466854 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
CCDC58-203ENST00000466854 CABLES1Q8TDN4 633 aa8.69□□□□□ -1.02
CCDC58-203ENST00000466854 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
CCDC58-203ENST00000466854 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
CCDC58-203ENST00000466854 LYPD8Q6UX82 237 aa8.68□□□□□ -1.02
CCDC58-203ENST00000466854 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
CCDC58-203ENST00000466854 ZBTB3Q9H5J0 574 aa8.68□□□□□ -1.02
CCDC58-203ENST00000466854 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
CCDC58-203ENST00000466854 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
CCDC58-203ENST00000466854 BAP1Q92560 729 aa8.67□□□□□ -1.02
CCDC58-203ENST00000466854 QPCTQ16769 361 aa8.66□□□□□ -1.02
CCDC58-203ENST00000466854 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms