RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 MMP16P51512 607 aa9.89□□□□□ -0.83
LRCH3-212ENST00000466845 RNF19BQ6ZMZ0 732 aa9.89□□□□□ -0.83
LRCH3-212ENST00000466845 SPDYE5A6NIY4 337 aa9.88□□□□□ -0.83
LRCH3-212ENST00000466845 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
LRCH3-212ENST00000466845 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
LRCH3-212ENST00000466845 RETREG3Q86VR2 466 aa9.88□□□□□ -0.83
LRCH3-212ENST00000466845 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
LRCH3-212ENST00000466845 CD2BP2O95400 341 aaKnown RBP9.87□□□□□ -0.83
LRCH3-212ENST00000466845 NRG2O14511 850 aaPredicted RBP9.85□□□□□ -0.83
LRCH3-212ENST00000466845 ZBTB24O43167 697 aaPredicted RBP9.85□□□□□ -0.83
LRCH3-212ENST00000466845 GFRA3O60609 400 aa9.85□□□□□ -0.83
LRCH3-212ENST00000466845 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
LRCH3-212ENST00000466845 TBC1D2Q9BYX2 928 aa9.85□□□□□ -0.83
LRCH3-212ENST00000466845 MS4A1P11836 297 aa9.84□□□□□ -0.83
LRCH3-212ENST00000466845 LIAT1Q6ZQX7 453 aa9.84□□□□□ -0.83
LRCH3-212ENST00000466845 RSPH6AQ9H0K4 717 aa9.84□□□□□ -0.83
LRCH3-212ENST00000466845 FCF1Q9Y324 198 aaKnown RBP9.84□□□□□ -0.83
LRCH3-212ENST00000466845 MOXD2PA6NHM9 499 aa9.83□□□□□ -0.84
LRCH3-212ENST00000466845 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 SPTLC1O15269 473 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 PRR20EP86478 221 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 PRR20CP86479 221 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 PRR20DP86480 221 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 PRR20BP86481 221 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 PRR20AP86496 221 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 HLA-CQ95604 372 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
LRCH3-212ENST00000466845 JUNDP17535 347 aa9.81□□□□□ -0.84
LRCH3-212ENST00000466845 ZNF697Q5TEC3 545 aa9.81□□□□□ -0.84
LRCH3-212ENST00000466845 PRPF38BQ5VTL8 546 aaKnown RBP9.81□□□□□ -0.84
LRCH3-212ENST00000466845 DESI1Q6ICB0 168 aa9.81□□□□□ -0.84
LRCH3-212ENST00000466845 EMID1Q96A84 441 aaPredicted RBP9.81□□□□□ -0.84
LRCH3-212ENST00000466845 PCDHGC3Q9UN70 934 aa9.81□□□□□ -0.84
LRCH3-212ENST00000466845 NDUFV2P19404 249 aa9.8□□□□□ -0.84
LRCH3-212ENST00000466845 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
LRCH3-212ENST00000466845 MTMR2Q13614 643 aa9.8□□□□□ -0.84
LRCH3-212ENST00000466845 RSBN1LQ6PCB5 846 aaPredicted RBP9.8□□□□□ -0.84
LRCH3-212ENST00000466845 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
LRCH3-212ENST00000466845 PLA2G2CQ5R387 149 aa9.79□□□□□ -0.84
LRCH3-212ENST00000466845 RIC3Q7Z5B4 369 aa9.78□□□□□ -0.84
LRCH3-212ENST00000466845 Q6ZNB5 142 aa9.77□□□□□ -0.85
LRCH3-212ENST00000466845 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.85
LRCH3-212ENST00000466845 ZBTB3Q9H5J0 574 aa9.77□□□□□ -0.85
LRCH3-212ENST00000466845 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
LRCH3-212ENST00000466845 GDF9O60383 454 aa9.75□□□□□ -0.85
LRCH3-212ENST00000466845 PTPRNQ16849 979 aa9.74□□□□□ -0.85
LRCH3-212ENST00000466845 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
LRCH3-212ENST00000466845 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
LRCH3-212ENST00000466845 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
LRCH3-212ENST00000466845 DGAT1O75907 488 aa9.73□□□□□ -0.85
LRCH3-212ENST00000466845 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
LRCH3-212ENST00000466845 CCDC24Q8N4L8 307 aa9.73□□□□□ -0.85
LRCH3-212ENST00000466845 KDM4CQ9H3R0 1056 aa9.73□□□□□ -0.85
LRCH3-212ENST00000466845 TIMELESSQ9UNS1 1208 aa9.73□□□□□ -0.85
LRCH3-212ENST00000466845 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
LRCH3-212ENST00000466845 TRIM32Q13049 653 aa9.72□□□□□ -0.85
LRCH3-212ENST00000466845 EVA1BQ9NVM1 165 aa9.72□□□□□ -0.85
LRCH3-212ENST00000466845 HRCP23327 699 aa9.71□□□□□ -0.86
LRCH3-212ENST00000466845 WNT7BP56706 349 aa9.71□□□□□ -0.86
LRCH3-212ENST00000466845 TRAF7Q6Q0C0 670 aa9.71□□□□□ -0.86
LRCH3-212ENST00000466845 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
LRCH3-212ENST00000466845 WNT7AO00755 349 aa9.7□□□□□ -0.86
LRCH3-212ENST00000466845 SKIV2LQ15477 1246 aaKnown RBP9.7□□□□□ -0.86
LRCH3-212ENST00000466845 LILRB3O75022 631 aa9.69□□□□□ -0.86
LRCH3-212ENST00000466845 CLK2P49760 499 aaKnown RBP9.69□□□□□ -0.86
LRCH3-212ENST00000466845 LYPD8Q6UX82 237 aa9.69□□□□□ -0.86
LRCH3-212ENST00000466845 PKD2L1Q9P0L9 805 aa9.69□□□□□ -0.86
LRCH3-212ENST00000466845 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-212ENST00000466845 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-212ENST00000466845 PKDCCQ504Y2 493 aa9.68□□□□□ -0.86
LRCH3-212ENST00000466845 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
LRCH3-212ENST00000466845 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-212ENST00000466845 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-212ENST00000466845 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
LRCH3-212ENST00000466845 FOXC1Q12948 553 aa9.67□□□□□ -0.86
LRCH3-212ENST00000466845 CYP4X1Q8N118 509 aa9.67□□□□□ -0.86
LRCH3-212ENST00000466845 LIMD1Q9UGP4 676 aa9.66□□□□□ -0.86
LRCH3-212ENST00000466845 TNFRSF10AO00220 468 aa9.65□□□□□ -0.86
LRCH3-212ENST00000466845 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-212ENST00000466845 GPBP1L1Q9HC44 474 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-212ENST00000466845 GOPCQ9HD26 462 aa9.65□□□□□ -0.86
LRCH3-212ENST00000466845 TOR4AQ9NXH8 423 aa9.65□□□□□ -0.86
LRCH3-212ENST00000466845 CFAP99D6REC4 459 aa9.64□□□□□ -0.87
LRCH3-212ENST00000466845 RANGAP1P46060 587 aaPredicted RBP9.64□□□□□ -0.87
LRCH3-212ENST00000466845 SNIP1Q8TAD8 396 aaKnown RBP9.64□□□□□ -0.87
LRCH3-212ENST00000466845 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
LRCH3-212ENST00000466845 FAM117AQ9C073 453 aa9.63□□□□□ -0.87
LRCH3-212ENST00000466845 POLR3EQ9NVU0 708 aa9.63□□□□□ -0.87
LRCH3-212ENST00000466845 TTC24A2A3L6 582 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-212ENST00000466845 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
LRCH3-212ENST00000466845 PTCRAQ6ISU1 281 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-212ENST00000466845 ARMC2Q8NEN0 867 aa9.62□□□□□ -0.87
LRCH3-212ENST00000466845 CABLES1Q8TDN4 633 aa9.62□□□□□ -0.87
LRCH3-212ENST00000466845 UNC93B1Q9H1C4 597 aa9.62□□□□□ -0.87
LRCH3-212ENST00000466845 FAM187AA6NFU0 413 aa9.61□□□□□ -0.87
LRCH3-212ENST00000466845 QPCTQ16769 361 aa9.61□□□□□ -0.87
LRCH3-212ENST00000466845 CTHP32929 405 aa9.6□□□□□ -0.87
LRCH3-212ENST00000466845 NEUROD2Q15784 382 aa9.6□□□□□ -0.87
LRCH3-212ENST00000466845 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms