RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 SAFB2Q14151 953 aaKnown RBP eCLIP27.36■■□□□ 1.97
CCDC78-207ENST00000466708 SENP3Q9H4L4 574 aaPredicted RBP27.36■■□□□ 1.97
CCDC78-207ENST00000466708 ATAD2Q6PL18 1390 aa27.36■■□□□ 1.97
CCDC78-207ENST00000466708 CGNL1Q0VF96 1302 aa27.35■■□□□ 1.97
CCDC78-207ENST00000466708 UBR1Q8IWV7 1749 aa27.35■■□□□ 1.97
CCDC78-207ENST00000466708 ABCC11Q96J66 1382 aa27.34■■□□□ 1.97
CCDC78-207ENST00000466708 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
CCDC78-207ENST00000466708 CABP2Q9NPB3 220 aa27.34■■□□□ 1.97
CCDC78-207ENST00000466708 NRXN3Q9Y4C0 1643 aa27.34■■□□□ 1.97
CCDC78-207ENST00000466708 NLRP1Q9C000 1473 aa27.34■■□□□ 1.97
CCDC78-207ENST00000466708 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
CCDC78-207ENST00000466708 NSD2O96028 1365 aa27.33■■□□□ 1.96
CCDC78-207ENST00000466708 SRPK2P78362 688 aaKnown RBP27.32■■□□□ 1.96
CCDC78-207ENST00000466708 TMEM2Q9UHN6 1383 aa27.32■■□□□ 1.96
CCDC78-207ENST00000466708 MINK1Q8N4C8 1332 aaPredicted RBP27.31■■□□□ 1.96
CCDC78-207ENST00000466708 MORC1Q86VD1 984 aa27.3■■□□□ 1.96
CCDC78-207ENST00000466708 POLR3AO14802 1390 aaPredicted RBP27.28■■□□□ 1.96
CCDC78-207ENST00000466708 RNF123Q5XPI4 1314 aa27.27■■□□□ 1.96
CCDC78-207ENST00000466708 SENP3-EIF4A1A0A087X0R7 540 aa27.27■■□□□ 1.96
CCDC78-207ENST00000466708 SIRT1Q96EB6 747 aa27.26■■□□□ 1.95
CCDC78-207ENST00000466708 TERF2IPQ9NYB0 399 aa27.25■■□□□ 1.95
CCDC78-207ENST00000466708 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
CCDC78-207ENST00000466708 C3P01024 1663 aa27.25■■□□□ 1.95
CCDC78-207ENST00000466708 KNDC1Q76NI1 1749 aa27.24■■□□□ 1.95
CCDC78-207ENST00000466708 CDK19Q9BWU1 502 aa27.24■■□□□ 1.95
CCDC78-207ENST00000466708 IRX6P78412 446 aaPredicted RBP27.23■■□□□ 1.95
CCDC78-207ENST00000466708 A0A1W2PP64 1363 aa27.23■■□□□ 1.95
CCDC78-207ENST00000466708 METP08581 1390 aa27.23■■□□□ 1.95
CCDC78-207ENST00000466708 SALL2Q9Y467 1007 aaPredicted RBP27.23■■□□□ 1.95
CCDC78-207ENST00000466708 TECPR2O15040 1411 aa27.22■■□□□ 1.95
CCDC78-207ENST00000466708 FAM135BQ49AJ0 1406 aa27.22■■□□□ 1.95
CCDC78-207ENST00000466708 WAPLQ7Z5K2 1190 aa27.19■■□□□ 1.94
CCDC78-207ENST00000466708 PPP4R2Q9NY27 417 aa27.19■■□□□ 1.94
CCDC78-207ENST00000466708 PLEKHG1Q9ULL1 1385 aa27.19■■□□□ 1.94
CCDC78-207ENST00000466708 CEBPAP49715 358 aaPredicted RBP27.18■■□□□ 1.94
CCDC78-207ENST00000466708 CD163L1Q9NR16 1453 aa27.18■■□□□ 1.94
CCDC78-207ENST00000466708 CPS1P31327 1500 aa27.17■■□□□ 1.94
CCDC78-207ENST00000466708 HDGFL2Q7Z4V5 671 aaPredicted RBP27.17■■□□□ 1.94
CCDC78-207ENST00000466708 PLEKHH1Q9ULM0 1364 aa27.17■■□□□ 1.94
CCDC78-207ENST00000466708 NGEFQ8N5V2 710 aa27.16■■□□□ 1.94
CCDC78-207ENST00000466708 MED14O60244 1454 aa27.16■■□□□ 1.94
CCDC78-207ENST00000466708 SLIT1O75093 1534 aa27.14■■□□□ 1.94
CCDC78-207ENST00000466708 ADAMTS13Q76LX8 1427 aa27.14■■□□□ 1.94
CCDC78-207ENST00000466708 EID1Q9Y6B2 187 aa27.13■■□□□ 1.93
CCDC78-207ENST00000466708 CFAP53Q96M91 514 aa27.13■■□□□ 1.93
CCDC78-207ENST00000466708 ATP7BP35670 1465 aa27.13■■□□□ 1.93
CCDC78-207ENST00000466708 ARHGAP23Q9P227 1491 aa27.13■■□□□ 1.93
CCDC78-207ENST00000466708 ANKRD26Q9UPS8 1709 aa27.12■■□□□ 1.93
CCDC78-207ENST00000466708 WASLO00401 505 aaPredicted RBP27.11■■□□□ 1.93
CCDC78-207ENST00000466708 LTKP29376 864 aa27.11■■□□□ 1.93
CCDC78-207ENST00000466708 TNNT2P45379 298 aaPredicted RBP27.11■■□□□ 1.93
CCDC78-207ENST00000466708 TXNDC2Q86VQ3 553 aa27.11■■□□□ 1.93
CCDC78-207ENST00000466708 CDCA7LQ96GN5 454 aa27.11■■□□□ 1.93
CCDC78-207ENST00000466708 CABP1Q9NZU7 370 aa27.11■■□□□ 1.93
CCDC78-207ENST00000466708 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
CCDC78-207ENST00000466708 ZNF521Q96K83 1311 aa27.11■■□□□ 1.93
CCDC78-207ENST00000466708 SHPRHQ149N8 1683 aa27.11■■□□□ 1.93
CCDC78-207ENST00000466708 MTHFSP49914 203 aa27.1■■□□□ 1.93
CCDC78-207ENST00000466708 THEMISQ8N1K5 641 aaPredicted RBP27.09■■□□□ 1.93
CCDC78-207ENST00000466708 FYB1O15117 783 aa27.07■■□□□ 1.92
CCDC78-207ENST00000466708 GOLGA2Q08379 1002 aa27.05■■□□□ 1.92
CCDC78-207ENST00000466708 CCDC146Q8IYE0 955 aa27.05■■□□□ 1.92
CCDC78-207ENST00000466708 KIF20BQ96Q89 1820 aa27.04■■□□□ 1.92
CCDC78-207ENST00000466708 APAF1O14727 1248 aa27.04■■□□□ 1.92
CCDC78-207ENST00000466708 RRP1P56182 461 aaKnown RBP27.04■■□□□ 1.92
CCDC78-207ENST00000466708 GGNBP2Q9H3C7 697 aa27.04■■□□□ 1.92
CCDC78-207ENST00000466708 TBX22Q9Y458 520 aa27.02■■□□□ 1.92
CCDC78-207ENST00000466708 ROBO2Q9HCK4 1378 aa27.01■■□□□ 1.92
CCDC78-207ENST00000466708 CPSF1Q10570 1443 aaKnown RBP27.01■■□□□ 1.91
CCDC78-207ENST00000466708 ADGRB2O60241 1585 aa27.01■■□□□ 1.91
CCDC78-207ENST00000466708 PPIP5K1Q6PFW1 1433 aa27■■□□□ 1.91
CCDC78-207ENST00000466708 DIP2AQ14689 1571 aa27■■□□□ 1.91
CCDC78-207ENST00000466708 NUDT16Q96DE0 195 aaKnown RBP27■■□□□ 1.91
CCDC78-207ENST00000466708 CCDC61Q9Y6R9 512 aa27■■□□□ 1.91
CCDC78-207ENST00000466708 RUNDC1Q96C34 613 aa26.99■■□□□ 1.91
CCDC78-207ENST00000466708 DUSP27Q5VZP5 1158 aa26.98■■□□□ 1.91
CCDC78-207ENST00000466708 EDC4Q6P2E9 1401 aaKnown RBP26.98■■□□□ 1.91
CCDC78-207ENST00000466708 PLPPR3Q6T4P5 718 aa26.97■■□□□ 1.91
CCDC78-207ENST00000466708 SLFN5Q08AF3 891 aa26.97■■□□□ 1.91
CCDC78-207ENST00000466708 CDC42BPGQ6DT37 1551 aa26.96■■□□□ 1.91
CCDC78-207ENST00000466708 TRMT2AQ8IZ69 625 aaKnown RBP26.96■■□□□ 1.91
CCDC78-207ENST00000466708 NCBP3Q53F19 620 aaKnown RBP26.95■■□□□ 1.91
CCDC78-207ENST00000466708 SLC26A8Q96RN1 970 aa26.95■■□□□ 1.9
CCDC78-207ENST00000466708 CEP170BQ9Y4F5 1589 aaPredicted RBP26.94■■□□□ 1.9
CCDC78-207ENST00000466708 PTPRUQ92729 1446 aa26.94■■□□□ 1.9
CCDC78-207ENST00000466708 RIMS1Q86UR5 1692 aaKnown RBP26.94■■□□□ 1.9
CCDC78-207ENST00000466708 TSHZ2Q9NRE2 1034 aa26.93■■□□□ 1.9
CCDC78-207ENST00000466708 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.93■■□□□ 1.9
CCDC78-207ENST00000466708 E9PSI1 815 aa26.93■■□□□ 1.9
CCDC78-207ENST00000466708 ZNF692Q9BU19 519 aaPredicted RBP26.93■■□□□ 1.9
CCDC78-207ENST00000466708 PTCH1Q13635 1447 aa26.92■■□□□ 1.9
CCDC78-207ENST00000466708 MON2Q7Z3U7 1717 aa26.91■■□□□ 1.9
CCDC78-207ENST00000466708 DNAJC5Q9H3Z4 198 aa26.91■■□□□ 1.9
CCDC78-207ENST00000466708 COL3A1P02461 1466 aaPredicted RBP26.91■■□□□ 1.9
CCDC78-207ENST00000466708 IQSEC2Q5JU85 1478 aa26.91■■□□□ 1.9
CCDC78-207ENST00000466708 B4GALNT3Q6L9W6 998 aa26.9■■□□□ 1.9
CCDC78-207ENST00000466708 AKAP12Q02952 1782 aa26.9■■□□□ 1.9
CCDC78-207ENST00000466708 PNPLA6Q8IY17 1366 aa26.9■■□□□ 1.9
CCDC78-207ENST00000466708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.9■■□□□ 1.9
CCDC78-207ENST00000466708 AMOTL2Q9Y2J4 779 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms