RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 PARP9Q8IXQ6 854 aa9.85□□□□□ -0.83
PSME4-204ENST00000466539 TMEM134Q9H6X4 195 aa9.85□□□□□ -0.83
PSME4-204ENST00000466539 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
PSME4-204ENST00000466539 KIAA0556O60303 1618 aa9.85□□□□□ -0.83
PSME4-204ENST00000466539 DNAJB2P25686 324 aa9.84□□□□□ -0.83
PSME4-204ENST00000466539 BRPF1P55201 1214 aaPredicted RBP9.84□□□□□ -0.83
PSME4-204ENST00000466539 SAMD7Q7Z3H4 446 aa9.84□□□□□ -0.83
PSME4-204ENST00000466539 STAC3Q96MF2 364 aa9.82□□□□□ -0.84
PSME4-204ENST00000466539 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
PSME4-204ENST00000466539 TTLL12Q14166 644 aaPredicted RBP9.81□□□□□ -0.84
PSME4-204ENST00000466539 CHMP7Q8WUX9 453 aaPredicted RBP9.81□□□□□ -0.84
PSME4-204ENST00000466539 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
PSME4-204ENST00000466539 GIGYF2Q6Y7W6 1299 aaKnown RBP9.8□□□□□ -0.84
PSME4-204ENST00000466539 RNF166Q96A37 237 aaPredicted RBP9.8□□□□□ -0.84
PSME4-204ENST00000466539 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
PSME4-204ENST00000466539 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
PSME4-204ENST00000466539 BCAMP50895 628 aa9.79□□□□□ -0.84
PSME4-204ENST00000466539 NEUROD2Q15784 382 aa9.79□□□□□ -0.84
PSME4-204ENST00000466539 WNT2BQ93097 391 aa9.79□□□□□ -0.84
PSME4-204ENST00000466539 LRRIQ1Q96JM4 1722 aa9.79□□□□□ -0.84
PSME4-204ENST00000466539 GOLGA8CPA6NN73 597 aa9.78□□□□□ -0.84
PSME4-204ENST00000466539 SLC10A3P09131 477 aa9.78□□□□□ -0.84
PSME4-204ENST00000466539 MS4A1P11836 297 aa9.78□□□□□ -0.84
PSME4-204ENST00000466539 CLCN1P35523 988 aa9.78□□□□□ -0.84
PSME4-204ENST00000466539 KDM4CQ9H3R0 1056 aa9.78□□□□□ -0.84
PSME4-204ENST00000466539 FAM217BQ9NTX9 383 aaPredicted RBP9.78□□□□□ -0.84
PSME4-204ENST00000466539 CASKIN1Q8WXD9 1431 aa9.77□□□□□ -0.85
PSME4-204ENST00000466539 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
PSME4-204ENST00000466539 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
PSME4-204ENST00000466539 FYCO1Q9BQS8 1478 aa9.77□□□□□ -0.85
PSME4-204ENST00000466539 CFAP43Q8NDM7 1665 aa9.77□□□□□ -0.85
PSME4-204ENST00000466539 PCF11O94913 1555 aaKnown RBP9.76□□□□□ -0.85
PSME4-204ENST00000466539 FHOD3Q2V2M9 1422 aa9.76□□□□□ -0.85
PSME4-204ENST00000466539 FMN1Q68DA7 1419 aa9.76□□□□□ -0.85
PSME4-204ENST00000466539 SOWAHBA6NEL2 793 aa9.76□□□□□ -0.85
PSME4-204ENST00000466539 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
PSME4-204ENST00000466539 ANKK1Q8NFD2 765 aa9.76□□□□□ -0.85
PSME4-204ENST00000466539 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
PSME4-204ENST00000466539 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
PSME4-204ENST00000466539 ABCA8O94911 1581 aa9.75□□□□□ -0.85
PSME4-204ENST00000466539 HDGFP51858 240 aaKnown RBP9.74□□□□□ -0.85
PSME4-204ENST00000466539 THSD4Q6ZMP0 1018 aa9.74□□□□□ -0.85
PSME4-204ENST00000466539 ERCC6L2Q5T890 1561 aa9.74□□□□□ -0.85
PSME4-204ENST00000466539 TIAM1Q13009 1591 aa9.73□□□□□ -0.85
PSME4-204ENST00000466539 RNF40O75150 1001 aa9.73□□□□□ -0.85
PSME4-204ENST00000466539 CD46P15529 392 aa9.73□□□□□ -0.85
PSME4-204ENST00000466539 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
PSME4-204ENST00000466539 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
PSME4-204ENST00000466539 CARMIL2Q6F5E8 1435 aa9.72□□□□□ -0.85
PSME4-204ENST00000466539 PRG4Q92954 1404 aaPredicted RBP9.72□□□□□ -0.85
PSME4-204ENST00000466539 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.85
PSME4-204ENST00000466539 SLF2Q8IX21 1173 aa9.71□□□□□ -0.86
PSME4-204ENST00000466539 WBP1LQ9NX94 342 aa9.71□□□□□ -0.86
PSME4-204ENST00000466539 HECW1Q76N89 1606 aa9.71□□□□□ -0.86
PSME4-204ENST00000466539 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
PSME4-204ENST00000466539 NUP153P49790 1475 aaKnown RBP9.7□□□□□ -0.86
PSME4-204ENST00000466539 UHRF1BP1LA0JNW5 1464 aa9.69□□□□□ -0.86
PSME4-204ENST00000466539 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
PSME4-204ENST00000466539 PTPN5P54829 565 aa9.69□□□□□ -0.86
PSME4-204ENST00000466539 BEGAINQ9BUH8 593 aa9.69□□□□□ -0.86
PSME4-204ENST00000466539 TSR3Q9UJK0 312 aaKnown RBP9.69□□□□□ -0.86
PSME4-204ENST00000466539 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
PSME4-204ENST00000466539 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
PSME4-204ENST00000466539 ARHGEF11O15085 1522 aa9.67□□□□□ -0.86
PSME4-204ENST00000466539 EPRSP07814 1512 aaKnown RBP9.67□□□□□ -0.86
PSME4-204ENST00000466539 CCDC18Q5T9S5 1454 aa9.67□□□□□ -0.86
PSME4-204ENST00000466539 GCGRP47871 477 aa9.67□□□□□ -0.86
PSME4-204ENST00000466539 APLP1P51693 650 aa9.67□□□□□ -0.86
PSME4-204ENST00000466539 PPP4CP60510 307 aa9.67□□□□□ -0.86
PSME4-204ENST00000466539 CFHP08603 1231 aa9.66□□□□□ -0.86
PSME4-204ENST00000466539 MAGI3Q5TCQ9 1506 aa9.66□□□□□ -0.86
PSME4-204ENST00000466539 ABCC2Q92887 1545 aa9.66□□□□□ -0.86
PSME4-204ENST00000466539 PLB1Q6P1J6 1458 aa9.66□□□□□ -0.86
PSME4-204ENST00000466539 LRRC9Q6ZRR7 1453 aa9.66□□□□□ -0.86
PSME4-204ENST00000466539 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
PSME4-204ENST00000466539 ADCY10Q96PN6 1610 aa9.64□□□□□ -0.87
PSME4-204ENST00000466539 KDM5BQ9UGL1 1544 aa9.63□□□□□ -0.87
PSME4-204ENST00000466539 SLC4A3P48751 1232 aa9.63□□□□□ -0.87
PSME4-204ENST00000466539 PTPRGP23470 1445 aa9.63□□□□□ -0.87
PSME4-204ENST00000466539 EHBP1L1Q8N3D4 1523 aa9.62□□□□□ -0.87
PSME4-204ENST00000466539 HLA-CQ95604 372 aa9.62□□□□□ -0.87
PSME4-204ENST00000466539 UACAQ9BZF9 1416 aa9.62□□□□□ -0.87
PSME4-204ENST00000466539 ATP10BO94823 1461 aa9.61□□□□□ -0.87
PSME4-204ENST00000466539 FUT2Q10981 343 aa9.61□□□□□ -0.87
PSME4-204ENST00000466539 RSPH4AQ5TD94 716 aa9.61□□□□□ -0.87
PSME4-204ENST00000466539 TBC1D2Q9BYX2 928 aa9.61□□□□□ -0.87
PSME4-204ENST00000466539 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
PSME4-204ENST00000466539 ACTN4O43707 911 aaKnown RBP9.6□□□□□ -0.87
PSME4-204ENST00000466539 KDM4AO75164 1064 aa9.6□□□□□ -0.87
PSME4-204ENST00000466539 PUS10Q3MIT2 529 aaKnown RBP9.6□□□□□ -0.87
PSME4-204ENST00000466539 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
PSME4-204ENST00000466539 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
PSME4-204ENST00000466539 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
PSME4-204ENST00000466539 RIMBP3CA6NJZ7 1639 aa9.59□□□□□ -0.87
PSME4-204ENST00000466539 RIMBP3BA6NNM3 1639 aa9.59□□□□□ -0.87
PSME4-204ENST00000466539 RIMBP3Q9UFD9 1639 aa9.59□□□□□ -0.87
PSME4-204ENST00000466539 RRBP1Q9P2E9 1410 aaKnown RBP9.58□□□□□ -0.88
PSME4-204ENST00000466539 MOXD2PA6NHM9 499 aa9.58□□□□□ -0.88
PSME4-204ENST00000466539 NDUFV2P19404 249 aa9.58□□□□□ -0.88
PSME4-204ENST00000466539 GUCA2AQ02747 115 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms