RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
APP-214ENST00000466453 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
APP-214ENST00000466453 RREB1Q92766 1687 aa12.84□□□□□ -0.35
APP-214ENST00000466453 KCNQ2O43526 872 aa12.84□□□□□ -0.35
APP-214ENST00000466453 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
APP-214ENST00000466453 NUP188Q5SRE5 1749 aa12.83□□□□□ -0.36
APP-214ENST00000466453 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
APP-214ENST00000466453 CAMKK2Q96RR4 588 aa12.83□□□□□ -0.36
APP-214ENST00000466453 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
APP-214ENST00000466453 VPS72Q15906 364 aa12.82□□□□□ -0.36
APP-214ENST00000466453 SLC52A1Q9NWF4 448 aa12.82□□□□□ -0.36
APP-214ENST00000466453 LMTK2Q8IWU2 1503 aa12.82□□□□□ -0.36
APP-214ENST00000466453 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
APP-214ENST00000466453 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
APP-214ENST00000466453 DUOX2Q9NRD8 1548 aa12.81□□□□□ -0.36
APP-214ENST00000466453 NRKQ7Z2Y5 1582 aa12.8□□□□□ -0.36
APP-214ENST00000466453 TMEM131LA2VDJ0 1609 aa12.8□□□□□ -0.36
APP-214ENST00000466453 CEP162Q5TB80 1403 aa12.79□□□□□ -0.36
APP-214ENST00000466453 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
APP-214ENST00000466453 PCNTO95613 3336 aa12.79□□□□□ -0.36
APP-214ENST00000466453 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
APP-214ENST00000466453 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.78□□□□□ -0.36
APP-214ENST00000466453 CAPN15O75808 1086 aa12.77□□□□□ -0.37
APP-214ENST00000466453 PXDNQ92626 1479 aa12.77□□□□□ -0.37
APP-214ENST00000466453 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.37
APP-214ENST00000466453 PRELPP51888 382 aa12.76□□□□□ -0.37
APP-214ENST00000466453 ORAI2Q96SN7 254 aa12.76□□□□□ -0.37
APP-214ENST00000466453 MYOM1P52179 1685 aa12.76□□□□□ -0.37
APP-214ENST00000466453 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
APP-214ENST00000466453 KANK1Q14678 1352 aa12.75□□□□□ -0.37
APP-214ENST00000466453 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
APP-214ENST00000466453 NBPF14Q5TI25 921 aa12.75□□□□□ -0.37
APP-214ENST00000466453 ERBINQ96RT1 1412 aa12.75□□□□□ -0.37
APP-214ENST00000466453 ADGRL2O95490 1459 aa12.74□□□□□ -0.37
APP-214ENST00000466453 A0A0G2JS52 829 aa12.74□□□□□ -0.37
APP-214ENST00000466453 HSPA6P17066 643 aa12.74□□□□□ -0.37
APP-214ENST00000466453 MYT1Q01538 1121 aa12.74□□□□□ -0.37
APP-214ENST00000466453 CASZ1Q86V15 1759 aa12.73□□□□□ -0.37
APP-214ENST00000466453 NPHP3Q7Z494 1330 aa12.72□□□□□ -0.37
APP-214ENST00000466453 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
APP-214ENST00000466453 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
APP-214ENST00000466453 NRXN3Q9Y4C0 1643 aa12.72□□□□□ -0.37
APP-214ENST00000466453 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
APP-214ENST00000466453 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
APP-214ENST00000466453 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
APP-214ENST00000466453 KIF15Q9NS87 1388 aa12.69□□□□□ -0.38
APP-214ENST00000466453 TRIM37O94972 964 aa12.68□□□□□ -0.38
APP-214ENST00000466453 APBA3O96018 575 aa12.68□□□□□ -0.38
APP-214ENST00000466453 COL13A1Q5TAT6 717 aaPredicted RBP12.68□□□□□ -0.38
APP-214ENST00000466453 SYT17Q9BSW7 474 aa12.68□□□□□ -0.38
APP-214ENST00000466453 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
APP-214ENST00000466453 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
APP-214ENST00000466453 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
APP-214ENST00000466453 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
APP-214ENST00000466453 PTGER2P43116 358 aa12.66□□□□□ -0.38
APP-214ENST00000466453 METP08581 1390 aa12.66□□□□□ -0.38
APP-214ENST00000466453 CROCC2H7BZ55 1655 aa12.64□□□□□ -0.39
APP-214ENST00000466453 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
APP-214ENST00000466453 XPCQ01831 940 aaPredicted RBP12.63□□□□□ -0.39
APP-214ENST00000466453 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
APP-214ENST00000466453 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
APP-214ENST00000466453 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
APP-214ENST00000466453 LRPPRCP42704 1394 aaKnown RBP12.61□□□□□ -0.39
APP-214ENST00000466453 FOXO3O43524 673 aa12.61□□□□□ -0.39
APP-214ENST00000466453 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
APP-214ENST00000466453 RGPD3A6NKT7 1758 aaPredicted RBP12.6□□□□□ -0.39
APP-214ENST00000466453 RGPD4Q7Z3J3 1758 aa12.6□□□□□ -0.39
APP-214ENST00000466453 ABCC5O15440 1437 aa12.6□□□□□ -0.39
APP-214ENST00000466453 ZBTB7AO95365 584 aa12.59□□□□□ -0.39
APP-214ENST00000466453 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
APP-214ENST00000466453 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
APP-214ENST00000466453 IQGAP3Q86VI3 1631 aa12.59□□□□□ -0.39
APP-214ENST00000466453 CDC42BPGQ6DT37 1551 aa12.58□□□□□ -0.4
APP-214ENST00000466453 PDGFDQ9GZP0 370 aaPredicted RBP12.58□□□□□ -0.4
APP-214ENST00000466453 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
APP-214ENST00000466453 GPR162Q16538 588 aa12.57□□□□□ -0.4
APP-214ENST00000466453 DNAJC5GQ8N7S2 189 aa12.57□□□□□ -0.4
APP-214ENST00000466453 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
APP-214ENST00000466453 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
APP-214ENST00000466453 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
APP-214ENST00000466453 ATP10DQ9P241 1426 aa12.56□□□□□ -0.4
APP-214ENST00000466453 RRP7BPQ9NSQ0 103 aa12.56□□□□□ -0.4
APP-214ENST00000466453 CCDC144AA2RUR9 1427 aa12.55□□□□□ -0.4
APP-214ENST00000466453 PRAG1Q86YV5 1406 aa12.55□□□□□ -0.4
APP-214ENST00000466453 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
APP-214ENST00000466453 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
APP-214ENST00000466453 ROBO2Q9HCK4 1378 aa12.55□□□□□ -0.4
APP-214ENST00000466453 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
APP-214ENST00000466453 APLP1P51693 650 aa12.54□□□□□ -0.4
APP-214ENST00000466453 TNS3Q68CZ2 1445 aa12.54□□□□□ -0.4
APP-214ENST00000466453 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
APP-214ENST00000466453 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
APP-214ENST00000466453 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
APP-214ENST00000466453 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
APP-214ENST00000466453 KIF1AQ12756 1690 aa12.52□□□□□ -0.4
APP-214ENST00000466453 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.41
APP-214ENST00000466453 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
APP-214ENST00000466453 MTFR1LQ9H019 292 aa12.5□□□□□ -0.41
APP-214ENST00000466453 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
APP-214ENST00000466453 ARXQ96QS3 562 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms