RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 HRCP23327 699 aa22.92■■□□□ 1.26
HMGXB4-206ENST00000466438 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
HMGXB4-206ENST00000466438 PSDA5PKW4 1024 aaPredicted RBP22.9■■□□□ 1.26
HMGXB4-206ENST00000466438 UNC5CLQ8IV45 518 aa22.9■■□□□ 1.26
HMGXB4-206ENST00000466438 SLIT2O94813 1529 aa22.89■■□□□ 1.26
HMGXB4-206ENST00000466438 PXDNQ92626 1479 aa22.89■■□□□ 1.25
HMGXB4-206ENST00000466438 ZNF326Q5BKZ1 582 aaKnown RBP22.88■■□□□ 1.25
HMGXB4-206ENST00000466438 APLP2Q06481 763 aa22.86■■□□□ 1.25
HMGXB4-206ENST00000466438 ROBO2Q9HCK4 1378 aa22.86■■□□□ 1.25
HMGXB4-206ENST00000466438 SEPT12Q8IYM1 358 aa22.85■■□□□ 1.25
HMGXB4-206ENST00000466438 PRAG1Q86YV5 1406 aa22.84■■□□□ 1.25
HMGXB4-206ENST00000466438 NEXMIFQ5QGS0 1516 aa22.84■■□□□ 1.25
HMGXB4-206ENST00000466438 BAG6P46379 1132 aa22.83■■□□□ 1.25
HMGXB4-206ENST00000466438 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
HMGXB4-206ENST00000466438 NUP155O75694 1391 aa22.81■■□□□ 1.24
HMGXB4-206ENST00000466438 ESCO1Q5FWF5 840 aa22.81■■□□□ 1.24
HMGXB4-206ENST00000466438 KRT27Q7Z3Y8 459 aa22.8■■□□□ 1.24
HMGXB4-206ENST00000466438 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
HMGXB4-206ENST00000466438 CDC42BPGQ6DT37 1551 aa22.8■■□□□ 1.24
HMGXB4-206ENST00000466438 XPCQ01831 940 aaPredicted RBP22.79■■□□□ 1.24
HMGXB4-206ENST00000466438 USP32Q8NFA0 1604 aa22.79■■□□□ 1.24
HMGXB4-206ENST00000466438 LRPPRCP42704 1394 aaKnown RBP22.78■■□□□ 1.24
HMGXB4-206ENST00000466438 FOXO3O43524 673 aa22.78■■□□□ 1.24
HMGXB4-206ENST00000466438 ONECUT3O60422 494 aaPredicted RBP22.78■■□□□ 1.24
HMGXB4-206ENST00000466438 YY1P25490 414 aa22.77■■□□□ 1.24
HMGXB4-206ENST00000466438 VPS72Q15906 364 aa22.77■■□□□ 1.24
HMGXB4-206ENST00000466438 ROCK1Q13464 1354 aa22.74■■□□□ 1.23
HMGXB4-206ENST00000466438 NWD2Q9ULI1 1742 aa22.72■■□□□ 1.23
HMGXB4-206ENST00000466438 R3HDM1Q15032 1099 aaKnown RBP22.72■■□□□ 1.23
HMGXB4-206ENST00000466438 SPATA31A3Q5VYP0 1347 aa22.72■■□□□ 1.23
HMGXB4-206ENST00000466438 CLTCL1P53675 1640 aa22.71■■□□□ 1.23
HMGXB4-206ENST00000466438 CCDC9Q9Y3X0 531 aaKnown RBP22.7■■□□□ 1.22
HMGXB4-206ENST00000466438 PLCH1Q4KWH8 1693 aa22.7■■□□□ 1.22
HMGXB4-206ENST00000466438 RGPD1P0DJD0 1748 aa22.69■■□□□ 1.22
HMGXB4-206ENST00000466438 EN1Q05925 392 aaPredicted RBP22.69■■□□□ 1.22
HMGXB4-206ENST00000466438 CCDC144AA2RUR9 1427 aa22.67■■□□□ 1.22
HMGXB4-206ENST00000466438 DISP2A7MBM2 1401 aa22.67■■□□□ 1.22
HMGXB4-206ENST00000466438 VGFO15240 615 aaPredicted RBP22.67■■□□□ 1.22
HMGXB4-206ENST00000466438 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
HMGXB4-206ENST00000466438 KIF1BO60333 1816 aa22.66■■□□□ 1.22
HMGXB4-206ENST00000466438 NAIPQ13075 1403 aa22.65■■□□□ 1.22
HMGXB4-206ENST00000466438 A0A0G2JS52 829 aa22.65■■□□□ 1.22
HMGXB4-206ENST00000466438 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
HMGXB4-206ENST00000466438 MYT1Q01538 1121 aa22.65■■□□□ 1.22
HMGXB4-206ENST00000466438 KIF1AQ12756 1690 aa22.65■■□□□ 1.22
HMGXB4-206ENST00000466438 NUTM2FA1L443 756 aa22.62■■□□□ 1.21
HMGXB4-206ENST00000466438 TNS3Q68CZ2 1445 aa22.61■■□□□ 1.21
HMGXB4-206ENST00000466438 TNS1Q9HBL0 1735 aaKnown RBP22.6■■□□□ 1.21
HMGXB4-206ENST00000466438 KRT28Q7Z3Y7 464 aa22.6■■□□□ 1.21
HMGXB4-206ENST00000466438 FAM98CQ17RN3 349 aaKnown RBP22.59■■□□□ 1.21
HMGXB4-206ENST00000466438 ABCA3Q99758 1704 aa22.59■■□□□ 1.21
HMGXB4-206ENST00000466438 CABLES1Q8TDN4 633 aa22.58■■□□□ 1.21
HMGXB4-206ENST00000466438 EZH2Q15910 746 aaKnown RBP22.57■■□□□ 1.2
HMGXB4-206ENST00000466438 NRAPQ86VF7 1730 aa22.57■■□□□ 1.2
HMGXB4-206ENST00000466438 FMN2Q9NZ56 1722 aa22.57■■□□□ 1.2
HMGXB4-206ENST00000466438 ADGRB2O60241 1585 aa22.56■■□□□ 1.2
HMGXB4-206ENST00000466438 RPGRIP1LQ68CZ1 1315 aa22.56■■□□□ 1.2
HMGXB4-206ENST00000466438 TECPR2O15040 1411 aa22.55■■□□□ 1.2
HMGXB4-206ENST00000466438 FAM83GA6ND36 823 aa22.54■■□□□ 1.2
HMGXB4-206ENST00000466438 FAM182BQ5T319 152 aa22.54■■□□□ 1.2
HMGXB4-206ENST00000466438 PSME1Q06323 249 aa22.53■■□□□ 1.2
HMGXB4-206ENST00000466438 SBNO1A3KN83 1393 aa22.52■■□□□ 1.2
HMGXB4-206ENST00000466438 ARHGEF10O15013 1369 aa22.52■■□□□ 1.2
HMGXB4-206ENST00000466438 WAPLQ7Z5K2 1190 aa22.52■■□□□ 1.2
HMGXB4-206ENST00000466438 CAMKK2Q96RR4 588 aa22.52■■□□□ 1.2
HMGXB4-206ENST00000466438 PPLO60437 1756 aa22.52■■□□□ 1.2
HMGXB4-206ENST00000466438 PARD3Q8TEW0 1356 aa22.51■■□□□ 1.19
HMGXB4-206ENST00000466438 DCAF8L1A6NGE4 600 aa22.51■■□□□ 1.19
HMGXB4-206ENST00000466438 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
HMGXB4-206ENST00000466438 THSD7AQ9UPZ6 1657 aa22.5■■□□□ 1.19
HMGXB4-206ENST00000466438 BTG4Q9NY30 223 aa22.48■■□□□ 1.19
HMGXB4-206ENST00000466438 NINLQ9Y2I6 1382 aa22.48■■□□□ 1.19
HMGXB4-206ENST00000466438 LMOD2Q6P5Q4 547 aa22.47■■□□□ 1.19
HMGXB4-206ENST00000466438 STK26Q9P289 416 aa22.47■■□□□ 1.19
HMGXB4-206ENST00000466438 PHF8Q9UPP1 1060 aa22.47■■□□□ 1.19
HMGXB4-206ENST00000466438 KNDC1Q76NI1 1749 aa22.47■■□□□ 1.19
HMGXB4-206ENST00000466438 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
HMGXB4-206ENST00000466438 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
HMGXB4-206ENST00000466438 SPATA31A5Q5VU36 1347 aa22.46■■□□□ 1.19
HMGXB4-206ENST00000466438 SPATA31A7Q8IWB4 1347 aa22.46■■□□□ 1.19
HMGXB4-206ENST00000466438 ABCC11Q96J66 1382 aa22.46■■□□□ 1.19
HMGXB4-206ENST00000466438 RREB1Q92766 1687 aa22.46■■□□□ 1.19
HMGXB4-206ENST00000466438 COL14A1Q05707 1796 aaKnown RBP22.45■■□□□ 1.19
HMGXB4-206ENST00000466438 NRXN1Q9ULB1 1477 aa22.45■■□□□ 1.18
HMGXB4-206ENST00000466438 TRIM37O94972 964 aa22.44■■□□□ 1.18
HMGXB4-206ENST00000466438 IFFO2Q5TF58 517 aa22.44■■□□□ 1.18
HMGXB4-206ENST00000466438 SPON1Q9HCB6 807 aa22.43■■□□□ 1.18
HMGXB4-206ENST00000466438 RGPD8O14715 1765 aaPredicted RBP22.43■■□□□ 1.18
HMGXB4-206ENST00000466438 NUP188Q5SRE5 1749 aa22.43■■□□□ 1.18
HMGXB4-206ENST00000466438 IFT172Q9UG01 1749 aa22.43■■□□□ 1.18
HMGXB4-206ENST00000466438 APBA3O96018 575 aa22.42■■□□□ 1.18
HMGXB4-206ENST00000466438 ITGAEP38570 1179 aa22.42■■□□□ 1.18
HMGXB4-206ENST00000466438 FAM196AQ6ZSG2 479 aa22.42■■□□□ 1.18
HMGXB4-206ENST00000466438 RRBP1Q9P2E9 1410 aaKnown RBP22.41■■□□□ 1.18
HMGXB4-206ENST00000466438 NBPF8Q3BBV2 869 aa22.41■■□□□ 1.18
HMGXB4-206ENST00000466438 NBPF14Q5TI25 921 aa22.41■■□□□ 1.18
HMGXB4-206ENST00000466438 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
HMGXB4-206ENST00000466438 SENP3-EIF4A1A0A087X0R7 540 aa22.38■■□□□ 1.17
HMGXB4-206ENST00000466438 KCNQ2O43526 872 aa22.38■■□□□ 1.17
HMGXB4-206ENST00000466438 CAMTA1Q9Y6Y1 1673 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms