RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
CLDN4-204ENST00000466411 ADGRB3O60242 1522 aa10.52□□□□□ -0.73
CLDN4-204ENST00000466411 SOS2Q07890 1332 aaPredicted RBP10.52□□□□□ -0.73
CLDN4-204ENST00000466411 PIK3R4Q99570 1358 aa10.51□□□□□ -0.73
CLDN4-204ENST00000466411 DAPK1P53355 1430 aa10.5□□□□□ -0.73
CLDN4-204ENST00000466411 MYO5BQ9ULV0 1848 aa10.5□□□□□ -0.73
CLDN4-204ENST00000466411 C1QTNF8P60827 252 aa10.5□□□□□ -0.73
CLDN4-204ENST00000466411 R3HDM1Q15032 1099 aaKnown RBP10.5□□□□□ -0.73
CLDN4-204ENST00000466411 BCANQ96GW7 911 aa10.5□□□□□ -0.73
CLDN4-204ENST00000466411 COL22A1Q8NFW1 1626 aaPredicted RBP10.5□□□□□ -0.73
CLDN4-204ENST00000466411 UTRNP46939 3433 aa10.5□□□□□ -0.73
CLDN4-204ENST00000466411 RALGAPBQ86X10 1494 aa10.49□□□□□ -0.73
CLDN4-204ENST00000466411 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
CLDN4-204ENST00000466411 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
CLDN4-204ENST00000466411 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.49□□□□□ -0.73
CLDN4-204ENST00000466411 ADGRL2O95490 1459 aa10.49□□□□□ -0.73
CLDN4-204ENST00000466411 MYOM2P54296 1465 aa10.49□□□□□ -0.73
CLDN4-204ENST00000466411 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
CLDN4-204ENST00000466411 MARF1Q9Y4F3 1742 aaKnown RBP10.48□□□□□ -0.73
CLDN4-204ENST00000466411 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-204ENST00000466411 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-204ENST00000466411 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
CLDN4-204ENST00000466411 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
CLDN4-204ENST00000466411 ANKRD30AQ9BXX3 1397 aa10.48□□□□□ -0.73
CLDN4-204ENST00000466411 SLC52A1Q9NWF4 448 aa10.47□□□□□ -0.73
CLDN4-204ENST00000466411 ROCK1Q13464 1354 aa10.47□□□□□ -0.73
CLDN4-204ENST00000466411 ERBINQ96RT1 1412 aa10.47□□□□□ -0.73
CLDN4-204ENST00000466411 RIMS2Q9UQ26 1411 aa10.47□□□□□ -0.73
CLDN4-204ENST00000466411 TRPM2O94759 1503 aa10.47□□□□□ -0.73
CLDN4-204ENST00000466411 FAM50AQ14320 339 aaKnown RBP10.46□□□□□ -0.73
CLDN4-204ENST00000466411 ABCC5O15440 1437 aa10.46□□□□□ -0.74
CLDN4-204ENST00000466411 LMTK2Q8IWU2 1503 aa10.46□□□□□ -0.74
CLDN4-204ENST00000466411 SLIT2O94813 1529 aa10.45□□□□□ -0.74
CLDN4-204ENST00000466411 BAG6P46379 1132 aa10.45□□□□□ -0.74
CLDN4-204ENST00000466411 EN1Q05925 392 aaPredicted RBP10.45□□□□□ -0.74
CLDN4-204ENST00000466411 SEPT12Q8IYM1 358 aa10.45□□□□□ -0.74
CLDN4-204ENST00000466411 PROM2Q8N271 834 aa10.45□□□□□ -0.74
CLDN4-204ENST00000466411 TMEM131LA2VDJ0 1609 aa10.44□□□□□ -0.74
CLDN4-204ENST00000466411 UNC5CLQ8IV45 518 aa10.44□□□□□ -0.74
CLDN4-204ENST00000466411 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
CLDN4-204ENST00000466411 GCC2Q8IWJ2 1684 aa10.44□□□□□ -0.74
CLDN4-204ENST00000466411 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
CLDN4-204ENST00000466411 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
CLDN4-204ENST00000466411 KIF15Q9NS87 1388 aa10.43□□□□□ -0.74
CLDN4-204ENST00000466411 CAMTA1Q9Y6Y1 1673 aa10.43□□□□□ -0.74
CLDN4-204ENST00000466411 KRT27Q7Z3Y8 459 aa10.42□□□□□ -0.74
CLDN4-204ENST00000466411 HDGFP51858 240 aaKnown RBP10.41□□□□□ -0.74
CLDN4-204ENST00000466411 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
CLDN4-204ENST00000466411 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
CLDN4-204ENST00000466411 NINLQ9Y2I6 1382 aa10.39□□□□□ -0.75
CLDN4-204ENST00000466411 NALCNQ8IZF0 1738 aa10.39□□□□□ -0.75
CLDN4-204ENST00000466411 PPARGC1BQ86YN6 1023 aaKnown RBP10.39□□□□□ -0.75
CLDN4-204ENST00000466411 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLDN4-204ENST00000466411 CAMKK2Q96RR4 588 aa10.39□□□□□ -0.75
CLDN4-204ENST00000466411 RTN4Q9NQC3 1192 aaKnown RBP10.39□□□□□ -0.75
CLDN4-204ENST00000466411 CHD4Q14839 1912 aa10.39□□□□□ -0.75
CLDN4-204ENST00000466411 VPS72Q15906 364 aa10.38□□□□□ -0.75
CLDN4-204ENST00000466411 EZH2Q15910 746 aaKnown RBP10.38□□□□□ -0.75
CLDN4-204ENST00000466411 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
CLDN4-204ENST00000466411 ANKRD50Q9ULJ7 1429 aa10.38□□□□□ -0.75
CLDN4-204ENST00000466411 TNS1Q9HBL0 1735 aaKnown RBP10.38□□□□□ -0.75
CLDN4-204ENST00000466411 KANK1Q14678 1352 aa10.38□□□□□ -0.75
CLDN4-204ENST00000466411 NRXN3Q9Y4C0 1643 aa10.37□□□□□ -0.75
CLDN4-204ENST00000466411 RGPD1P0DJD0 1748 aa10.37□□□□□ -0.75
CLDN4-204ENST00000466411 PXDNQ92626 1479 aa10.36□□□□□ -0.75
CLDN4-204ENST00000466411 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-204ENST00000466411 METP08581 1390 aa10.35□□□□□ -0.75
CLDN4-204ENST00000466411 IQGAP3Q86VI3 1631 aa10.33□□□□□ -0.76
CLDN4-204ENST00000466411 KCNQ2O43526 872 aa10.33□□□□□ -0.76
CLDN4-204ENST00000466411 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
CLDN4-204ENST00000466411 RRP7BPQ9NSQ0 103 aa10.33□□□□□ -0.76
CLDN4-204ENST00000466411 CHIC2Q9UKJ5 165 aa10.33□□□□□ -0.76
CLDN4-204ENST00000466411 RPRD2Q5VT52 1461 aaKnown RBP10.33□□□□□ -0.76
CLDN4-204ENST00000466411 NAIPQ13075 1403 aa10.33□□□□□ -0.76
CLDN4-204ENST00000466411 FAM182BQ5T319 152 aa10.32□□□□□ -0.76
CLDN4-204ENST00000466411 FBXO3Q9UK99 471 aa10.32□□□□□ -0.76
CLDN4-204ENST00000466411 RREB1Q92766 1687 aa10.31□□□□□ -0.76
CLDN4-204ENST00000466411 NWD2Q9ULI1 1742 aa10.31□□□□□ -0.76
CLDN4-204ENST00000466411 ITGAEP38570 1179 aa10.31□□□□□ -0.76
CLDN4-204ENST00000466411 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
CLDN4-204ENST00000466411 USP32Q8NFA0 1604 aa10.29□□□□□ -0.76
CLDN4-204ENST00000466411 PPP1R1BQ9UD71 204 aaPredicted RBP10.29□□□□□ -0.76
CLDN4-204ENST00000466411 NPHP3Q7Z494 1330 aa10.29□□□□□ -0.76
CLDN4-204ENST00000466411 PARD3Q8TEW0 1356 aa10.28□□□□□ -0.76
CLDN4-204ENST00000466411 SPDYE2BA6NHP3 402 aa10.28□□□□□ -0.76
CLDN4-204ENST00000466411 SPDYE6P0CI01 402 aa10.28□□□□□ -0.76
CLDN4-204ENST00000466411 TRIM26Q12899 539 aaPredicted RBP10.28□□□□□ -0.76
CLDN4-204ENST00000466411 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
CLDN4-204ENST00000466411 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
CLDN4-204ENST00000466411 FOXO3O43524 673 aa10.27□□□□□ -0.77
CLDN4-204ENST00000466411 XPCQ01831 940 aaPredicted RBP10.27□□□□□ -0.77
CLDN4-204ENST00000466411 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
CLDN4-204ENST00000466411 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
CLDN4-204ENST00000466411 SLC34A2O95436 690 aa10.26□□□□□ -0.77
CLDN4-204ENST00000466411 FAM98CQ17RN3 349 aaKnown RBP10.26□□□□□ -0.77
CLDN4-204ENST00000466411 SPATA31A3Q5VYP0 1347 aa10.26□□□□□ -0.77
CLDN4-204ENST00000466411 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
CLDN4-204ENST00000466411 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
CLDN4-204ENST00000466411 THSD7AQ9UPZ6 1657 aa10.25□□□□□ -0.77
CLDN4-204ENST00000466411 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms