RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
PDZRN3-204ENST00000466348 CEBPAP49715 358 aaPredicted RBP14.47□□□□□ -0.09
PDZRN3-204ENST00000466348 CARD14Q9BXL6 1004 aa14.47□□□□□ -0.09
PDZRN3-204ENST00000466348 NRXN3Q9Y4C0 1643 aa14.47□□□□□ -0.09
PDZRN3-204ENST00000466348 USP32Q8NFA0 1604 aa14.46□□□□□ -0.09
PDZRN3-204ENST00000466348 PPP2R1AP30153 589 aa14.46□□□□□ -0.09
PDZRN3-204ENST00000466348 TXNDC2Q86VQ3 553 aa14.46□□□□□ -0.09
PDZRN3-204ENST00000466348 TERF2IPQ9NYB0 399 aa14.46□□□□□ -0.09
PDZRN3-204ENST00000466348 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
PDZRN3-204ENST00000466348 CGNL1Q0VF96 1302 aa14.45□□□□□ -0.1
PDZRN3-204ENST00000466348 KNDC1Q76NI1 1749 aa14.45□□□□□ -0.1
PDZRN3-204ENST00000466348 SLC12A5Q9H2X9 1139 aa14.45□□□□□ -0.1
PDZRN3-204ENST00000466348 MED14O60244 1454 aa14.44□□□□□ -0.1
PDZRN3-204ENST00000466348 SRPK2P78362 688 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-204ENST00000466348 METP08581 1390 aa14.44□□□□□ -0.1
PDZRN3-204ENST00000466348 SETD1BQ9UPS6 1966 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-204ENST00000466348 ADAMTS13Q76LX8 1427 aa14.43□□□□□ -0.1
PDZRN3-204ENST00000466348 CNGB1Q14028 1251 aaPredicted RBP14.43□□□□□ -0.1
PDZRN3-204ENST00000466348 BCANQ96GW7 911 aa14.43□□□□□ -0.1
PDZRN3-204ENST00000466348 ADAMTSL3P82987 1691 aa14.42□□□□□ -0.1
PDZRN3-204ENST00000466348 CPS1P31327 1500 aa14.42□□□□□ -0.1
PDZRN3-204ENST00000466348 LTKP29376 864 aa14.42□□□□□ -0.1
PDZRN3-204ENST00000466348 CDK19Q9BWU1 502 aa14.42□□□□□ -0.1
PDZRN3-204ENST00000466348 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
PDZRN3-204ENST00000466348 DIP2AQ14689 1571 aa14.42□□□□□ -0.1
PDZRN3-204ENST00000466348 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-204ENST00000466348 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
PDZRN3-204ENST00000466348 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
PDZRN3-204ENST00000466348 PIK3R4Q99570 1358 aa14.41□□□□□ -0.1
PDZRN3-204ENST00000466348 PDE3BQ13370 1112 aa14.4□□□□□ -0.1
PDZRN3-204ENST00000466348 NGEFQ8N5V2 710 aa14.4□□□□□ -0.1
PDZRN3-204ENST00000466348 WASLO00401 505 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-204ENST00000466348 SAFB2Q14151 953 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDZRN3-204ENST00000466348 MORC1Q86VD1 984 aa14.39□□□□□ -0.11
PDZRN3-204ENST00000466348 POLR3AO14802 1390 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-204ENST00000466348 NEFLP07196 543 aa14.38□□□□□ -0.11
PDZRN3-204ENST00000466348 CEP170BQ9Y4F5 1589 aaPredicted RBP14.38□□□□□ -0.11
PDZRN3-204ENST00000466348 ATP7BP35670 1465 aa14.38□□□□□ -0.11
PDZRN3-204ENST00000466348 RIMS1Q86UR5 1692 aaKnown RBP14.37□□□□□ -0.11
PDZRN3-204ENST00000466348 WDR43Q15061 677 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDZRN3-204ENST00000466348 WAPLQ7Z5K2 1190 aa14.37□□□□□ -0.11
PDZRN3-204ENST00000466348 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-204ENST00000466348 SMG6Q86US8 1419 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-204ENST00000466348 ANKLE2Q86XL3 938 aa14.36□□□□□ -0.11
PDZRN3-204ENST00000466348 ERICH6BQ5W0A0 696 aa14.35□□□□□ -0.11
PDZRN3-204ENST00000466348 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-204ENST00000466348 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
PDZRN3-204ENST00000466348 ZNF142P52746 1687 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-204ENST00000466348 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
PDZRN3-204ENST00000466348 PTCH1Q13635 1447 aa14.34□□□□□ -0.11
PDZRN3-204ENST00000466348 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
PDZRN3-204ENST00000466348 ADGRB2O60241 1585 aa14.34□□□□□ -0.11
PDZRN3-204ENST00000466348 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
PDZRN3-204ENST00000466348 CABP1Q9NZU7 370 aa14.33□□□□□ -0.12
PDZRN3-204ENST00000466348 CD163L1Q9NR16 1453 aa14.32□□□□□ -0.12
PDZRN3-204ENST00000466348 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-204ENST00000466348 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
PDZRN3-204ENST00000466348 NUDCQ9Y266 331 aa14.32□□□□□ -0.12
PDZRN3-204ENST00000466348 AMOTL2Q9Y2J4 779 aa14.32□□□□□ -0.12
PDZRN3-204ENST00000466348 ROBO2Q9HCK4 1378 aa14.32□□□□□ -0.12
PDZRN3-204ENST00000466348 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-204ENST00000466348 NUDT16Q96DE0 195 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-204ENST00000466348 SLC26A8Q96RN1 970 aa14.31□□□□□ -0.12
PDZRN3-204ENST00000466348 CPSF1Q10570 1443 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-204ENST00000466348 FYB1O15117 783 aa14.3□□□□□ -0.12
PDZRN3-204ENST00000466348 PLEKHG3A1L390 1219 aa14.29□□□□□ -0.12
PDZRN3-204ENST00000466348 EDC4Q6P2E9 1401 aaKnown RBP14.29□□□□□ -0.12
PDZRN3-204ENST00000466348 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
PDZRN3-204ENST00000466348 PPIP5K1Q6PFW1 1433 aa14.28□□□□□ -0.12
PDZRN3-204ENST00000466348 PLPPR3Q6T4P5 718 aa14.28□□□□□ -0.12
PDZRN3-204ENST00000466348 SUPT16HQ9Y5B9 1047 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-204ENST00000466348 ANKRD26Q9UPS8 1709 aa14.27□□□□□ -0.12
PDZRN3-204ENST00000466348 CDC42BPGQ6DT37 1551 aa14.27□□□□□ -0.12
PDZRN3-204ENST00000466348 MTHFSP49914 203 aa14.26□□□□□ -0.13
PDZRN3-204ENST00000466348 XRN1Q8IZH2 1706 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-204ENST00000466348 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
PDZRN3-204ENST00000466348 FKBP8Q14318 412 aa14.24□□□□□ -0.13
PDZRN3-204ENST00000466348 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
PDZRN3-204ENST00000466348 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-204ENST00000466348 ANKARQ7Z5J8 1434 aa14.24□□□□□ -0.13
PDZRN3-204ENST00000466348 RNF123Q5XPI4 1314 aa14.23□□□□□ -0.13
PDZRN3-204ENST00000466348 GGNBP2Q9H3C7 697 aa14.23□□□□□ -0.13
PDZRN3-204ENST00000466348 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
PDZRN3-204ENST00000466348 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-204ENST00000466348 KIF20BQ96Q89 1820 aa14.22□□□□□ -0.13
PDZRN3-204ENST00000466348 PNPLA6Q8IY17 1366 aa14.22□□□□□ -0.13
PDZRN3-204ENST00000466348 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
PDZRN3-204ENST00000466348 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
PDZRN3-204ENST00000466348 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.14
PDZRN3-204ENST00000466348 ZNF521Q96K83 1311 aa14.2□□□□□ -0.14
PDZRN3-204ENST00000466348 AKAP12Q02952 1782 aa14.2□□□□□ -0.14
PDZRN3-204ENST00000466348 KCNA6P17658 529 aa14.2□□□□□ -0.14
PDZRN3-204ENST00000466348 TNNT2P45379 298 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-204ENST00000466348 TOPAZ1Q8N9V7 1692 aa14.2□□□□□ -0.14
PDZRN3-204ENST00000466348 CHD2O14647 1828 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-204ENST00000466348 TTC21AQ8NDW8 1320 aa14.19□□□□□ -0.14
PDZRN3-204ENST00000466348 ITSN1Q15811 1721 aa14.19□□□□□ -0.14
PDZRN3-204ENST00000466348 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
PDZRN3-204ENST00000466348 COG3Q96JB2 828 aa14.19□□□□□ -0.14
PDZRN3-204ENST00000466348 CCDC27Q2M243 656 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms