RNA–Protein interactions for RNA: ENST00000466334.1

RND3-206, Transcript of Rho family GTPase 3, humanhuman

TSL 2

Gene RND3, Length 385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-206ENST00000466334 EYA1Q99502 592 aa8.87□□□□□ -0.99
RND3-206ENST00000466334 SPATA32Q96LK8 384 aa8.86□□□□□ -0.99
RND3-206ENST00000466334 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
RND3-206ENST00000466334 MARSP56192 900 aaKnown RBP8.85□□□□□ -0.99
RND3-206ENST00000466334 USP46P62068 366 aa8.85□□□□□ -0.99
RND3-206ENST00000466334 GIPC2Q8TF65 315 aa8.85□□□□□ -0.99
RND3-206ENST00000466334 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
RND3-206ENST00000466334 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
RND3-206ENST00000466334 FOSBP53539 338 aa8.84□□□□□ -0.99
RND3-206ENST00000466334 CDCA7LQ96GN5 454 aa8.84□□□□□ -0.99
RND3-206ENST00000466334 NOVA2Q9UNW9 492 aaKnown RBP8.84□□□□□ -0.99
RND3-206ENST00000466334 PPM1GO15355 546 aaPredicted RBP8.83□□□□□ -1
RND3-206ENST00000466334 KDM4AO75164 1064 aa8.83□□□□□ -1
RND3-206ENST00000466334 ZC3H6P61129 1189 aaKnown RBP8.83□□□□□ -1
RND3-206ENST00000466334 ZNF326Q5BKZ1 582 aaKnown RBP8.83□□□□□ -1
RND3-206ENST00000466334 NPAS4Q8IUM7 802 aa8.83□□□□□ -1
RND3-206ENST00000466334 HELBQ8NG08 1087 aaPredicted RBP8.83□□□□□ -1
RND3-206ENST00000466334 LRRN4Q8WUT4 740 aa8.83□□□□□ -1
RND3-206ENST00000466334 KDM4FA0A1W2PPD8 638 aa8.82□□□□□ -1
RND3-206ENST00000466334 FDX1P10109 184 aa8.82□□□□□ -1
RND3-206ENST00000466334 EIF4G2P78344 907 aaKnown RBP eCLIP8.82□□□□□ -1
RND3-206ENST00000466334 NFATC2IPQ8NCF5 419 aa8.82□□□□□ -1
RND3-206ENST00000466334 PNMA1Q8ND90 353 aa8.82□□□□□ -1
RND3-206ENST00000466334 SMARCA5O60264 1052 aaPredicted RBP8.81□□□□□ -1
RND3-206ENST00000466334 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
RND3-206ENST00000466334 UBXN4Q92575 508 aa8.81□□□□□ -1
RND3-206ENST00000466334 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
RND3-206ENST00000466334 SLAIN2Q9P270 581 aa8.81□□□□□ -1
RND3-206ENST00000466334 PCDHGC3Q9UN70 934 aa8.81□□□□□ -1
RND3-206ENST00000466334 ANKRD33BA6NCL7 494 aa8.8□□□□□ -1
RND3-206ENST00000466334 HOXA2O43364 376 aa8.8□□□□□ -1
RND3-206ENST00000466334 DNAJB2P25686 324 aa8.8□□□□□ -1
RND3-206ENST00000466334 ATN1P54259 1190 aaPredicted RBP8.8□□□□□ -1
RND3-206ENST00000466334 ZDHHC16Q969W1 377 aa8.8□□□□□ -1
RND3-206ENST00000466334 FAM198AQ9UFP1 575 aa8.8□□□□□ -1
RND3-206ENST00000466334 FAM196BA6NMK8 535 aa8.79□□□□□ -1
RND3-206ENST00000466334 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
RND3-206ENST00000466334 PLEKHM2Q8IWE5 1019 aa8.79□□□□□ -1
RND3-206ENST00000466334 PLCG2P16885 1265 aa8.78□□□□□ -1
RND3-206ENST00000466334 MTMR2Q13614 643 aa8.78□□□□□ -1
RND3-206ENST00000466334 SLF2Q8IX21 1173 aa8.78□□□□□ -1
RND3-206ENST00000466334 TMEM134Q9H6X4 195 aa8.78□□□□□ -1
RND3-206ENST00000466334 C7P10643 843 aa8.77□□□□□ -1.01
RND3-206ENST00000466334 SF3A1Q15459 793 aaKnown RBP8.77□□□□□ -1.01
RND3-206ENST00000466334 PCDHGA4Q9Y5G9 962 aa8.77□□□□□ -1.01
RND3-206ENST00000466334 GCGRP47871 477 aa8.76□□□□□ -1.01
RND3-206ENST00000466334 SERPINB4P48594 390 aa8.76□□□□□ -1.01
RND3-206ENST00000466334 CDCA7Q9BWT1 371 aaPredicted RBP8.76□□□□□ -1.01
RND3-206ENST00000466334 USP17L3A6NCW0 530 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 USP17L4A6NCW7 530 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 C19orf67A6NJJ6 358 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 NCLP19338 710 aaKnown RBP8.75□□□□□ -1.01
RND3-206ENST00000466334 NAALADL2Q58DX5 795 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 USP17L2Q6R6M4 530 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 USP17L1Q7RTZ2 530 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 FBXO33Q7Z6M2 555 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
RND3-206ENST00000466334 CFAP99D6REC4 459 aa8.74□□□□□ -1.01
RND3-206ENST00000466334 GALR2O43603 387 aaPredicted RBP8.74□□□□□ -1.01
RND3-206ENST00000466334 NR1H3Q13133 447 aa8.74□□□□□ -1.01
RND3-206ENST00000466334 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
RND3-206ENST00000466334 BIN2Q9UBW5 565 aaPredicted RBP8.74□□□□□ -1.01
RND3-206ENST00000466334 USP17L15C9J2P7 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L10C9JJH3 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L13C9JLJ4 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L12C9JPN9 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L11C9JVI0 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L21D6R901 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L18D6R9N7 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L22D6RA61 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L17D6RBQ6 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L19D6RCP7 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L20D6RJB6 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 PIK3CDO00329 1044 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 ATMINO43313 823 aaPredicted RBP8.73□□□□□ -1.01
RND3-206ENST00000466334 RECKO95980 971 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 ATP2B4P23634 1241 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L24Q0WX57 530 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 PTK7Q13308 1070 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 NR6A1Q15406 480 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 CHRDL2Q6WN34 429 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 RDH13Q8NBN7 331 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 FAM200AQ8TCP9 573 aa8.73□□□□□ -1.01
RND3-206ENST00000466334 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
RND3-206ENST00000466334 CRTC2Q53ET0 693 aaPredicted RBP8.72□□□□□ -1.01
RND3-206ENST00000466334 NUDT18Q6ZVK8 323 aa8.72□□□□□ -1.01
RND3-206ENST00000466334 TSC1Q92574 1164 aa8.72□□□□□ -1.01
RND3-206ENST00000466334 COL19A1Q14993 1142 aa8.71□□□□□ -1.02
RND3-206ENST00000466334 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
RND3-206ENST00000466334 ASTLQ6HA08 431 aaPredicted RBP8.71□□□□□ -1.02
RND3-206ENST00000466334 LARP1Q6PKG0 1096 aaKnown RBP8.71□□□□□ -1.02
RND3-206ENST00000466334 ANKRD13AQ8IZ07 590 aa8.71□□□□□ -1.02
RND3-206ENST00000466334 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.02
RND3-206ENST00000466334 MKRN1Q9UHC7 482 aaKnown RBP8.71□□□□□ -1.02
RND3-206ENST00000466334 EGFL7Q9UHF1 273 aa8.71□□□□□ -1.02
RND3-206ENST00000466334 SKIP12755 728 aa8.7□□□□□ -1.02
RND3-206ENST00000466334 GUCA2AQ02747 115 aa8.7□□□□□ -1.02
RND3-206ENST00000466334 TSKSQ9UJT2 592 aa8.7□□□□□ -1.02
RND3-206ENST00000466334 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
RND3-206ENST00000466334 LZTS3O60299 673 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms