RNA–Protein interactions for RNA: ENST00000466199.1

EIF3B-208, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-208ENST00000466199 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
EIF3B-208ENST00000466199 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
EIF3B-208ENST00000466199 DLC1Q96QB1 1528 aa12.6□□□□□ -0.39
EIF3B-208ENST00000466199 POLR1AO95602 1720 aaPredicted RBP12.59□□□□□ -0.39
EIF3B-208ENST00000466199 PLEKHH1Q9ULM0 1364 aa12.59□□□□□ -0.39
EIF3B-208ENST00000466199 CABP2Q9NPB3 220 aa12.59□□□□□ -0.39
EIF3B-208ENST00000466199 PTCH1Q13635 1447 aa12.59□□□□□ -0.39
EIF3B-208ENST00000466199 C11orf95C9JLR9 678 aaPredicted RBP12.58□□□□□ -0.4
EIF3B-208ENST00000466199 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
EIF3B-208ENST00000466199 NCOA3Q9Y6Q9 1424 aa12.58□□□□□ -0.4
EIF3B-208ENST00000466199 TMEM94Q12767 1356 aa12.57□□□□□ -0.4
EIF3B-208ENST00000466199 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
EIF3B-208ENST00000466199 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
EIF3B-208ENST00000466199 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
EIF3B-208ENST00000466199 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
EIF3B-208ENST00000466199 ASXL1Q8IXJ9 1541 aa12.57□□□□□ -0.4
EIF3B-208ENST00000466199 NUTM2FA1L443 756 aa12.56□□□□□ -0.4
EIF3B-208ENST00000466199 MSH6P52701 1360 aa12.56□□□□□ -0.4
EIF3B-208ENST00000466199 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
EIF3B-208ENST00000466199 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
EIF3B-208ENST00000466199 TERF2IPQ9NYB0 399 aa12.55□□□□□ -0.4
EIF3B-208ENST00000466199 WASHC2AQ641Q2 1341 aa12.55□□□□□ -0.4
EIF3B-208ENST00000466199 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
EIF3B-208ENST00000466199 LTBP4Q8N2S1 1624 aa12.55□□□□□ -0.4
EIF3B-208ENST00000466199 HDGFL2Q7Z4V5 671 aaPredicted RBP12.54□□□□□ -0.4
EIF3B-208ENST00000466199 CABP1Q9NZU7 370 aa12.54□□□□□ -0.4
EIF3B-208ENST00000466199 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
EIF3B-208ENST00000466199 SLC12A5Q9H2X9 1139 aa12.53□□□□□ -0.4
EIF3B-208ENST00000466199 DISP3Q9P2K9 1392 aa12.53□□□□□ -0.4
EIF3B-208ENST00000466199 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
EIF3B-208ENST00000466199 ESCO1Q5FWF5 840 aa12.52□□□□□ -0.41
EIF3B-208ENST00000466199 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
EIF3B-208ENST00000466199 PANK3Q9H999 370 aa12.52□□□□□ -0.41
EIF3B-208ENST00000466199 CPS1P31327 1500 aa12.52□□□□□ -0.41
EIF3B-208ENST00000466199 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
EIF3B-208ENST00000466199 TOM1O60784 492 aa12.51□□□□□ -0.41
EIF3B-208ENST00000466199 SLAIN2Q9P270 581 aa12.51□□□□□ -0.41
EIF3B-208ENST00000466199 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
EIF3B-208ENST00000466199 ADGRL3Q9HAR2 1447 aa12.51□□□□□ -0.41
EIF3B-208ENST00000466199 NINLQ9Y2I6 1382 aa12.5□□□□□ -0.41
EIF3B-208ENST00000466199 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
EIF3B-208ENST00000466199 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
EIF3B-208ENST00000466199 PSME1Q06323 249 aa12.49□□□□□ -0.41
EIF3B-208ENST00000466199 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
EIF3B-208ENST00000466199 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
EIF3B-208ENST00000466199 XRN1Q8IZH2 1706 aaKnown RBP12.48□□□□□ -0.41
EIF3B-208ENST00000466199 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
EIF3B-208ENST00000466199 LRRC7Q96NW7 1537 aa12.48□□□□□ -0.41
EIF3B-208ENST00000466199 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
EIF3B-208ENST00000466199 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
EIF3B-208ENST00000466199 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
EIF3B-208ENST00000466199 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
EIF3B-208ENST00000466199 DCCP43146 1447 aa12.45□□□□□ -0.42
EIF3B-208ENST00000466199 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
EIF3B-208ENST00000466199 ACEP12821 1306 aa12.45□□□□□ -0.42
EIF3B-208ENST00000466199 PRR36Q9H6K5 1346 aa12.45□□□□□ -0.42
EIF3B-208ENST00000466199 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
EIF3B-208ENST00000466199 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
EIF3B-208ENST00000466199 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
EIF3B-208ENST00000466199 ANP32CO43423 234 aa12.44□□□□□ -0.42
EIF3B-208ENST00000466199 FOXO3O43524 673 aa12.44□□□□□ -0.42
EIF3B-208ENST00000466199 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
EIF3B-208ENST00000466199 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
EIF3B-208ENST00000466199 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.42□□□□□ -0.42
EIF3B-208ENST00000466199 TULP4Q9NRJ4 1543 aa12.42□□□□□ -0.42
EIF3B-208ENST00000466199 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
EIF3B-208ENST00000466199 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
EIF3B-208ENST00000466199 CNGB1Q14028 1251 aaPredicted RBP12.42□□□□□ -0.42
EIF3B-208ENST00000466199 KRT28Q7Z3Y7 464 aa12.42□□□□□ -0.42
EIF3B-208ENST00000466199 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
EIF3B-208ENST00000466199 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
EIF3B-208ENST00000466199 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
EIF3B-208ENST00000466199 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
EIF3B-208ENST00000466199 PIP4K2BP78356 416 aa12.41□□□□□ -0.42
EIF3B-208ENST00000466199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
EIF3B-208ENST00000466199 CARD14Q9BXL6 1004 aa12.41□□□□□ -0.42
EIF3B-208ENST00000466199 LMOD2Q6P5Q4 547 aa12.4□□□□□ -0.42
EIF3B-208ENST00000466199 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
EIF3B-208ENST00000466199 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
EIF3B-208ENST00000466199 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
EIF3B-208ENST00000466199 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
EIF3B-208ENST00000466199 BRD4O60885 1362 aaPredicted RBP12.39□□□□□ -0.43
EIF3B-208ENST00000466199 STRCP1A6NGW2 1772 aa12.38□□□□□ -0.43
EIF3B-208ENST00000466199 RALBP1Q15311 655 aa12.38□□□□□ -0.43
EIF3B-208ENST00000466199 CC2D1BQ5T0F9 858 aaKnown RBP12.38□□□□□ -0.43
EIF3B-208ENST00000466199 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
EIF3B-208ENST00000466199 COG3Q96JB2 828 aa12.38□□□□□ -0.43
EIF3B-208ENST00000466199 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
EIF3B-208ENST00000466199 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
EIF3B-208ENST00000466199 MST1RQ04912 1400 aa12.37□□□□□ -0.43
EIF3B-208ENST00000466199 NLRP6P59044 892 aa12.37□□□□□ -0.43
EIF3B-208ENST00000466199 NLRP13Q86W25 1043 aa12.37□□□□□ -0.43
EIF3B-208ENST00000466199 A0A1W2PP64 1363 aa12.37□□□□□ -0.43
EIF3B-208ENST00000466199 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
EIF3B-208ENST00000466199 ATP7BP35670 1465 aa12.37□□□□□ -0.43
EIF3B-208ENST00000466199 FYB1O15117 783 aa12.36□□□□□ -0.43
EIF3B-208ENST00000466199 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
EIF3B-208ENST00000466199 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
EIF3B-208ENST00000466199 CPSF1Q10570 1443 aaKnown RBP12.36□□□□□ -0.43
EIF3B-208ENST00000466199 NSD3Q9BZ95 1437 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms