RNA–Protein interactions for RNA: ENST00000465672.1

RETREG2-209, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-209ENST00000465672 ESCO1Q5FWF5 840 aa23.49■■□□□ 1.35
RETREG2-209ENST00000465672 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
RETREG2-209ENST00000465672 VGFO15240 615 aaPredicted RBP23.48■■□□□ 1.35
RETREG2-209ENST00000465672 XPCQ01831 940 aaPredicted RBP23.48■■□□□ 1.35
RETREG2-209ENST00000465672 MYOM2P54296 1465 aa23.48■■□□□ 1.35
RETREG2-209ENST00000465672 GJD4Q96KN9 370 aaPredicted RBP23.47■■□□□ 1.35
RETREG2-209ENST00000465672 NPHP3Q7Z494 1330 aa23.46■■□□□ 1.35
RETREG2-209ENST00000465672 HFM1A2PYH4 1435 aa23.44■■□□□ 1.34
RETREG2-209ENST00000465672 FOXO3O43524 673 aa23.44■■□□□ 1.34
RETREG2-209ENST00000465672 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
RETREG2-209ENST00000465672 PXDNQ92626 1479 aa23.43■■□□□ 1.34
RETREG2-209ENST00000465672 NUTM2FA1L443 756 aa23.41■■□□□ 1.34
RETREG2-209ENST00000465672 BRWD3Q6RI45 1802 aa23.4■■□□□ 1.34
RETREG2-209ENST00000465672 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
RETREG2-209ENST00000465672 PPLO60437 1756 aa23.4■■□□□ 1.34
RETREG2-209ENST00000465672 CDC42BPGQ6DT37 1551 aa23.39■■□□□ 1.33
RETREG2-209ENST00000465672 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.39■■□□□ 1.33
RETREG2-209ENST00000465672 BLMP54132 1417 aaPredicted RBP23.37■■□□□ 1.33
RETREG2-209ENST00000465672 DEFB132Q7Z7B7 95 aa23.37■■□□□ 1.33
RETREG2-209ENST00000465672 UNC5CLQ8IV45 518 aa23.37■■□□□ 1.33
RETREG2-209ENST00000465672 RALGAPBQ86X10 1494 aa23.36■■□□□ 1.33
RETREG2-209ENST00000465672 RPGRIP1LQ68CZ1 1315 aa23.36■■□□□ 1.33
RETREG2-209ENST00000465672 GLI3P10071 1580 aa23.36■■□□□ 1.33
RETREG2-209ENST00000465672 LRPPRCP42704 1394 aaKnown RBP23.36■■□□□ 1.33
RETREG2-209ENST00000465672 STK26Q9P289 416 aa23.34■■□□□ 1.33
RETREG2-209ENST00000465672 NAIPQ13075 1403 aa23.33■■□□□ 1.33
RETREG2-209ENST00000465672 SF3B2Q13435 895 aaKnown RBP23.33■■□□□ 1.33
RETREG2-209ENST00000465672 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
RETREG2-209ENST00000465672 SLIT2O94813 1529 aa23.32■■□□□ 1.32
RETREG2-209ENST00000465672 PLEKHG5O94827 1062 aa23.3■■□□□ 1.32
RETREG2-209ENST00000465672 SEPT12Q8IYM1 358 aa23.3■■□□□ 1.32
RETREG2-209ENST00000465672 SPATA31A3Q5VYP0 1347 aa23.3■■□□□ 1.32
RETREG2-209ENST00000465672 HAP1P54257 671 aaPredicted RBP23.29■■□□□ 1.32
RETREG2-209ENST00000465672 USP32Q8NFA0 1604 aa23.28■■□□□ 1.32
RETREG2-209ENST00000465672 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
RETREG2-209ENST00000465672 CCDC9Q9Y3X0 531 aaKnown RBP23.27■■□□□ 1.32
RETREG2-209ENST00000465672 ADGRF5Q8IZF2 1346 aa23.27■■□□□ 1.32
RETREG2-209ENST00000465672 FMN2Q9NZ56 1722 aa23.26■■□□□ 1.31
RETREG2-209ENST00000465672 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
RETREG2-209ENST00000465672 RGPD8O14715 1765 aaPredicted RBP23.26■■□□□ 1.31
RETREG2-209ENST00000465672 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
RETREG2-209ENST00000465672 PLEKHH1Q9ULM0 1364 aa23.25■■□□□ 1.31
RETREG2-209ENST00000465672 LRP5O75197 1615 aa23.24■■□□□ 1.31
RETREG2-209ENST00000465672 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
RETREG2-209ENST00000465672 CABLES1Q8TDN4 633 aa23.24■■□□□ 1.31
RETREG2-209ENST00000465672 CCDC144AA2RUR9 1427 aa23.24■■□□□ 1.31
RETREG2-209ENST00000465672 PLCH1Q4KWH8 1693 aa23.23■■□□□ 1.31
RETREG2-209ENST00000465672 VPS72Q15906 364 aa23.23■■□□□ 1.31
RETREG2-209ENST00000465672 RGL3Q3MIN7 710 aa23.23■■□□□ 1.31
RETREG2-209ENST00000465672 PSDA5PKW4 1024 aaPredicted RBP23.22■■□□□ 1.31
RETREG2-209ENST00000465672 KRT27Q7Z3Y8 459 aa23.22■■□□□ 1.31
RETREG2-209ENST00000465672 TECPR2O15040 1411 aa23.22■■□□□ 1.31
RETREG2-209ENST00000465672 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
RETREG2-209ENST00000465672 KNDC1Q76NI1 1749 aa23.2■■□□□ 1.3
RETREG2-209ENST00000465672 NWD2Q9ULI1 1742 aa23.2■■□□□ 1.3
RETREG2-209ENST00000465672 A0A0G2JS52 829 aa23.2■■□□□ 1.3
RETREG2-209ENST00000465672 MYT1Q01538 1121 aa23.2■■□□□ 1.3
RETREG2-209ENST00000465672 LMOD2Q6P5Q4 547 aa23.2■■□□□ 1.3
RETREG2-209ENST00000465672 ABCC11Q96J66 1382 aa23.18■■□□□ 1.3
RETREG2-209ENST00000465672 PSME1Q06323 249 aa23.18■■□□□ 1.3
RETREG2-209ENST00000465672 IFT172Q9UG01 1749 aa23.18■■□□□ 1.3
RETREG2-209ENST00000465672 TNS3Q68CZ2 1445 aa23.17■■□□□ 1.3
RETREG2-209ENST00000465672 ONECUT3O60422 494 aaPredicted RBP23.17■■□□□ 1.3
RETREG2-209ENST00000465672 PHF8Q9UPP1 1060 aa23.17■■□□□ 1.3
RETREG2-209ENST00000465672 BAG6P46379 1132 aa23.16■■□□□ 1.3
RETREG2-209ENST00000465672 ABCA3Q99758 1704 aa23.16■■□□□ 1.3
RETREG2-209ENST00000465672 HRCP23327 699 aa23.14■■□□□ 1.29
RETREG2-209ENST00000465672 FAM83GA6ND36 823 aa23.13■■□□□ 1.29
RETREG2-209ENST00000465672 YTHDC2Q9H6S0 1430 aaKnown RBP23.13■■□□□ 1.29
RETREG2-209ENST00000465672 ANKRD30BQ9BXX2 1392 aa23.13■■□□□ 1.29
RETREG2-209ENST00000465672 FAM98CQ17RN3 349 aaKnown RBP23.12■■□□□ 1.29
RETREG2-209ENST00000465672 EN1Q05925 392 aaPredicted RBP23.1■■□□□ 1.29
RETREG2-209ENST00000465672 SPATA31E1Q6ZUB1 1445 aa23.09■■□□□ 1.29
RETREG2-209ENST00000465672 SAFB2Q14151 953 aaKnown RBP eCLIP23.09■■□□□ 1.29
RETREG2-209ENST00000465672 SBNO1A3KN83 1393 aa23.09■■□□□ 1.29
RETREG2-209ENST00000465672 ARHGEF10O15013 1369 aa23.09■■□□□ 1.29
RETREG2-209ENST00000465672 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
RETREG2-209ENST00000465672 FAM182BQ5T319 152 aa23.08■■□□□ 1.29
RETREG2-209ENST00000465672 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.29
RETREG2-209ENST00000465672 NRAPQ86VF7 1730 aa23.08■■□□□ 1.28
RETREG2-209ENST00000465672 PMFBP1Q8TBY8 1022 aa23.07■■□□□ 1.28
RETREG2-209ENST00000465672 RGPD1P0DJD0 1748 aa23.07■■□□□ 1.28
RETREG2-209ENST00000465672 R3HDM1Q15032 1099 aaKnown RBP23.06■■□□□ 1.28
RETREG2-209ENST00000465672 SIRT1Q96EB6 747 aa23.06■■□□□ 1.28
RETREG2-209ENST00000465672 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
RETREG2-209ENST00000465672 PRAM1Q96QH2 718 aa23.03■■□□□ 1.28
RETREG2-209ENST00000465672 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
RETREG2-209ENST00000465672 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
RETREG2-209ENST00000465672 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
RETREG2-209ENST00000465672 COL14A1Q05707 1796 aaKnown RBP23.01■■□□□ 1.27
RETREG2-209ENST00000465672 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
RETREG2-209ENST00000465672 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
RETREG2-209ENST00000465672 POGKQ9P215 609 aa22.99■■□□□ 1.27
RETREG2-209ENST00000465672 TNS1Q9HBL0 1735 aaKnown RBP22.98■■□□□ 1.27
RETREG2-209ENST00000465672 EZH2Q15910 746 aaKnown RBP22.97■■□□□ 1.27
RETREG2-209ENST00000465672 SPATA31A5Q5VU36 1347 aa22.97■■□□□ 1.27
RETREG2-209ENST00000465672 SPATA31A7Q8IWB4 1347 aa22.97■■□□□ 1.27
RETREG2-209ENST00000465672 ALS2Q96Q42 1657 aa22.97■■□□□ 1.27
RETREG2-209ENST00000465672 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
RETREG2-209ENST00000465672 ANKARQ7Z5J8 1434 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms