RNA–Protein interactions for RNA: ENST00000465337.2

ATPAF2-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 5

Gene ATPAF2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-203ENST00000465337 SBNO2Q9Y2G9 1366 aa18.82■□□□□ 0.6
ATPAF2-203ENST00000465337 KNDC1Q76NI1 1749 aa18.82■□□□□ 0.6
ATPAF2-203ENST00000465337 ADGRL3Q9HAR2 1447 aa18.82■□□□□ 0.6
ATPAF2-203ENST00000465337 PUS7Q96PZ0 661 aaKnown RBP18.81■□□□□ 0.6
ATPAF2-203ENST00000465337 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
ATPAF2-203ENST00000465337 USP47Q96K76 1375 aa18.78■□□□□ 0.6
ATPAF2-203ENST00000465337 EVC2Q86UK5 1308 aa18.77■□□□□ 0.6
ATPAF2-203ENST00000465337 WASLO00401 505 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-203ENST00000465337 STRCP1A6NGW2 1772 aa18.76■□□□□ 0.59
ATPAF2-203ENST00000465337 ST20-MTHFSA0A0A6YYL1 179 aa18.76■□□□□ 0.59
ATPAF2-203ENST00000465337 SLAIN2Q9P270 581 aa18.76■□□□□ 0.59
ATPAF2-203ENST00000465337 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
ATPAF2-203ENST00000465337 SAFB2Q14151 953 aaKnown RBP eCLIP18.75■□□□□ 0.59
ATPAF2-203ENST00000465337 RBM33Q96EV2 1170 aaKnown RBP18.74■□□□□ 0.59
ATPAF2-203ENST00000465337 UBAP1LF5GYI3 381 aa18.73■□□□□ 0.59
ATPAF2-203ENST00000465337 TMF1P82094 1093 aa18.73■□□□□ 0.59
ATPAF2-203ENST00000465337 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
ATPAF2-203ENST00000465337 TESK2Q96S53 571 aa18.71■□□□□ 0.59
ATPAF2-203ENST00000465337 CDK19Q9BWU1 502 aa18.71■□□□□ 0.59
ATPAF2-203ENST00000465337 ANKARQ7Z5J8 1434 aa18.71■□□□□ 0.59
ATPAF2-203ENST00000465337 CDC42BPGQ6DT37 1551 aa18.71■□□□□ 0.59
ATPAF2-203ENST00000465337 ADGRB2O60241 1585 aa18.69■□□□□ 0.58
ATPAF2-203ENST00000465337 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
ATPAF2-203ENST00000465337 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
ATPAF2-203ENST00000465337 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
ATPAF2-203ENST00000465337 SRPK2P78362 688 aaKnown RBP18.68■□□□□ 0.58
ATPAF2-203ENST00000465337 FBXO41Q8TF61 875 aa18.68■□□□□ 0.58
ATPAF2-203ENST00000465337 HIRIP3Q9BW71 556 aaPredicted RBP18.68■□□□□ 0.58
ATPAF2-203ENST00000465337 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
ATPAF2-203ENST00000465337 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
ATPAF2-203ENST00000465337 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.65■□□□□ 0.58
ATPAF2-203ENST00000465337 MST1RQ04912 1400 aa18.65■□□□□ 0.58
ATPAF2-203ENST00000465337 C1orf167Q5SNV9 1468 aa18.65■□□□□ 0.58
ATPAF2-203ENST00000465337 ESCO1Q5FWF5 840 aa18.64■□□□□ 0.57
ATPAF2-203ENST00000465337 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
ATPAF2-203ENST00000465337 PLEKHG3A1L390 1219 aa18.63■□□□□ 0.57
ATPAF2-203ENST00000465337 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
ATPAF2-203ENST00000465337 TULP4Q9NRJ4 1543 aa18.62■□□□□ 0.57
ATPAF2-203ENST00000465337 XIRP1Q702N8 1843 aaKnown RBP18.62■□□□□ 0.57
ATPAF2-203ENST00000465337 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
ATPAF2-203ENST00000465337 PHF8Q9UPP1 1060 aa18.61■□□□□ 0.57
ATPAF2-203ENST00000465337 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
ATPAF2-203ENST00000465337 NPHP3Q7Z494 1330 aa18.6■□□□□ 0.57
ATPAF2-203ENST00000465337 CABP2Q9NPB3 220 aa18.6■□□□□ 0.57
ATPAF2-203ENST00000465337 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
ATPAF2-203ENST00000465337 PIP4K2BP78356 416 aa18.59■□□□□ 0.57
ATPAF2-203ENST00000465337 PSME1Q06323 249 aa18.59■□□□□ 0.57
ATPAF2-203ENST00000465337 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
ATPAF2-203ENST00000465337 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
ATPAF2-203ENST00000465337 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
ATPAF2-203ENST00000465337 NUTM2FA1L443 756 aa18.57■□□□□ 0.56
ATPAF2-203ENST00000465337 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
ATPAF2-203ENST00000465337 PRR36Q9H6K5 1346 aa18.56■□□□□ 0.56
ATPAF2-203ENST00000465337 NGDNQ8NEJ9 315 aaKnown RBP18.56■□□□□ 0.56
ATPAF2-203ENST00000465337 FMN2Q9NZ56 1722 aa18.55■□□□□ 0.56
ATPAF2-203ENST00000465337 ATP7BP35670 1465 aa18.55■□□□□ 0.56
ATPAF2-203ENST00000465337 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
ATPAF2-203ENST00000465337 HDGFL2Q7Z4V5 671 aaPredicted RBP18.54■□□□□ 0.56
ATPAF2-203ENST00000465337 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
ATPAF2-203ENST00000465337 POLR3AO14802 1390 aaPredicted RBP18.54■□□□□ 0.56
ATPAF2-203ENST00000465337 FOXO3O43524 673 aa18.53■□□□□ 0.56
ATPAF2-203ENST00000465337 PPIP5K1Q6PFW1 1433 aa18.52■□□□□ 0.56
ATPAF2-203ENST00000465337 ILDR1Q86SU0 546 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-203ENST00000465337 TMC1Q8TDI8 760 aa18.52■□□□□ 0.56
ATPAF2-203ENST00000465337 DISP3Q9P2K9 1392 aa18.52■□□□□ 0.55
ATPAF2-203ENST00000465337 SOS2Q07890 1332 aaPredicted RBP18.51■□□□□ 0.55
ATPAF2-203ENST00000465337 ACEP12821 1306 aa18.5■□□□□ 0.55
ATPAF2-203ENST00000465337 KRT28Q7Z3Y7 464 aa18.5■□□□□ 0.55
ATPAF2-203ENST00000465337 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
ATPAF2-203ENST00000465337 KIF1AQ12756 1690 aa18.49■□□□□ 0.55
ATPAF2-203ENST00000465337 SBNO1A3KN83 1393 aa18.48■□□□□ 0.55
ATPAF2-203ENST00000465337 SLC12A5Q9H2X9 1139 aa18.48■□□□□ 0.55
ATPAF2-203ENST00000465337 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
ATPAF2-203ENST00000465337 AHDC1Q5TGY3 1603 aaPredicted RBP18.46■□□□□ 0.55
ATPAF2-203ENST00000465337 ANKRD36BQ8N2N9 1353 aa18.46■□□□□ 0.55
ATPAF2-203ENST00000465337 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
ATPAF2-203ENST00000465337 ITSN1Q15811 1721 aa18.46■□□□□ 0.55
ATPAF2-203ENST00000465337 ROBO1Q9Y6N7 1651 aa18.45■□□□□ 0.54
ATPAF2-203ENST00000465337 TTC21AQ8NDW8 1320 aa18.45■□□□□ 0.54
ATPAF2-203ENST00000465337 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
ATPAF2-203ENST00000465337 CCDC7Q96M83 1385 aa18.44■□□□□ 0.54
ATPAF2-203ENST00000465337 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
ATPAF2-203ENST00000465337 ARHGEF10O15013 1369 aa18.43■□□□□ 0.54
ATPAF2-203ENST00000465337 KTN1Q86UP2 1357 aaKnown RBP18.43■□□□□ 0.54
ATPAF2-203ENST00000465337 HSPA1LP34931 641 aa18.43■□□□□ 0.54
ATPAF2-203ENST00000465337 SPATA31A3Q5VYP0 1347 aa18.43■□□□□ 0.54
ATPAF2-203ENST00000465337 POLR3GLQ9BT43 218 aa18.42■□□□□ 0.54
ATPAF2-203ENST00000465337 JCADQ9P266 1359 aa18.42■□□□□ 0.54
ATPAF2-203ENST00000465337 USP6P35125 1406 aa18.41■□□□□ 0.54
ATPAF2-203ENST00000465337 WASHC2AQ641Q2 1341 aa18.41■□□□□ 0.54
ATPAF2-203ENST00000465337 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
ATPAF2-203ENST00000465337 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
ATPAF2-203ENST00000465337 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
ATPAF2-203ENST00000465337 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
ATPAF2-203ENST00000465337 PXDNQ92626 1479 aa18.39■□□□□ 0.54
ATPAF2-203ENST00000465337 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
ATPAF2-203ENST00000465337 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
ATPAF2-203ENST00000465337 TTC21BQ7Z4L5 1316 aa18.39■□□□□ 0.53
ATPAF2-203ENST00000465337 ABTB2Q8N961 1025 aa18.38■□□□□ 0.53
ATPAF2-203ENST00000465337 PANK3Q9H999 370 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms