RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PXDNQ92626 1479 aa16.57■□□□□ 0.24
COL11A1-207ENST00000465209 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
COL11A1-207ENST00000465209 C8orf37Q96NL8 207 aa16.57■□□□□ 0.24
COL11A1-207ENST00000465209 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
COL11A1-207ENST00000465209 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
COL11A1-207ENST00000465209 ADGRF5Q8IZF2 1346 aa16.53■□□□□ 0.24
COL11A1-207ENST00000465209 QTRT2Q9H974 415 aaKnown RBP16.53■□□□□ 0.24
COL11A1-207ENST00000465209 FOXD1Q16676 465 aa16.52■□□□□ 0.24
COL11A1-207ENST00000465209 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.24
COL11A1-207ENST00000465209 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
COL11A1-207ENST00000465209 ATRNO75882 1429 aa16.52■□□□□ 0.23
COL11A1-207ENST00000465209 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
COL11A1-207ENST00000465209 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
COL11A1-207ENST00000465209 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
COL11A1-207ENST00000465209 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
COL11A1-207ENST00000465209 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
COL11A1-207ENST00000465209 PLEKHH1Q9ULM0 1364 aa16.49■□□□□ 0.23
COL11A1-207ENST00000465209 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
COL11A1-207ENST00000465209 NGLY1Q96IV0 654 aa16.48■□□□□ 0.23
COL11A1-207ENST00000465209 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
COL11A1-207ENST00000465209 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
COL11A1-207ENST00000465209 ANKRD30BQ9BXX2 1392 aa16.48■□□□□ 0.23
COL11A1-207ENST00000465209 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
COL11A1-207ENST00000465209 NRXN1Q9ULB1 1477 aa16.47■□□□□ 0.23
COL11A1-207ENST00000465209 USP21Q9UK80 565 aa16.46■□□□□ 0.23
COL11A1-207ENST00000465209 RGPD8O14715 1765 aaPredicted RBP16.46■□□□□ 0.22
COL11A1-207ENST00000465209 WAPLQ7Z5K2 1190 aa16.45■□□□□ 0.22
COL11A1-207ENST00000465209 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
COL11A1-207ENST00000465209 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
COL11A1-207ENST00000465209 ESCO1Q5FWF5 840 aa16.44■□□□□ 0.22
COL11A1-207ENST00000465209 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
COL11A1-207ENST00000465209 ABCA3Q99758 1704 aa16.43■□□□□ 0.22
COL11A1-207ENST00000465209 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
COL11A1-207ENST00000465209 USP32Q8NFA0 1604 aa16.43■□□□□ 0.22
COL11A1-207ENST00000465209 GLI3P10071 1580 aa16.43■□□□□ 0.22
COL11A1-207ENST00000465209 SLIT2O94813 1529 aa16.42■□□□□ 0.22
COL11A1-207ENST00000465209 FOXO3O43524 673 aa16.42■□□□□ 0.22
COL11A1-207ENST00000465209 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
COL11A1-207ENST00000465209 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
COL11A1-207ENST00000465209 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
COL11A1-207ENST00000465209 STK26Q9P289 416 aa16.4■□□□□ 0.22
COL11A1-207ENST00000465209 SPATA31A3Q5VYP0 1347 aa16.39■□□□□ 0.21
COL11A1-207ENST00000465209 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
COL11A1-207ENST00000465209 PLCH1Q4KWH8 1693 aa16.38■□□□□ 0.21
COL11A1-207ENST00000465209 NUTM2FA1L443 756 aa16.38■□□□□ 0.21
COL11A1-207ENST00000465209 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
COL11A1-207ENST00000465209 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
COL11A1-207ENST00000465209 DLC1Q96QB1 1528 aa16.37■□□□□ 0.21
COL11A1-207ENST00000465209 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
COL11A1-207ENST00000465209 ADGRB1O14514 1584 aa16.37■□□□□ 0.21
COL11A1-207ENST00000465209 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
COL11A1-207ENST00000465209 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
COL11A1-207ENST00000465209 C14orf93Q9H972 538 aaKnown RBP16.36■□□□□ 0.21
COL11A1-207ENST00000465209 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
COL11A1-207ENST00000465209 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
COL11A1-207ENST00000465209 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
COL11A1-207ENST00000465209 CFAP70Q5T0N1 1121 aa16.32■□□□□ 0.2
COL11A1-207ENST00000465209 UNC5CLQ8IV45 518 aa16.32■□□□□ 0.2
COL11A1-207ENST00000465209 ALS2Q96Q42 1657 aa16.32■□□□□ 0.2
COL11A1-207ENST00000465209 CRYBG1Q9Y4K1 1723 aa16.32■□□□□ 0.2
COL11A1-207ENST00000465209 ANKARQ7Z5J8 1434 aa16.31■□□□□ 0.2
COL11A1-207ENST00000465209 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
COL11A1-207ENST00000465209 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
COL11A1-207ENST00000465209 KRT28Q7Z3Y7 464 aa16.31■□□□□ 0.2
COL11A1-207ENST00000465209 PHF8Q9UPP1 1060 aa16.3■□□□□ 0.2
COL11A1-207ENST00000465209 ACIN1Q9UKV3 1341 aaKnown RBP16.28■□□□□ 0.2
COL11A1-207ENST00000465209 PRAM1Q96QH2 718 aa16.28■□□□□ 0.2
COL11A1-207ENST00000465209 RAB3GAP2Q9H2M9 1393 aa16.27■□□□□ 0.2
COL11A1-207ENST00000465209 CCDC125Q86Z20 511 aa16.27■□□□□ 0.2
COL11A1-207ENST00000465209 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.19
COL11A1-207ENST00000465209 TULP4Q9NRJ4 1543 aa16.26■□□□□ 0.19
COL11A1-207ENST00000465209 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
COL11A1-207ENST00000465209 CABLES1Q8TDN4 633 aa16.26■□□□□ 0.19
COL11A1-207ENST00000465209 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
COL11A1-207ENST00000465209 VPS72Q15906 364 aa16.25■□□□□ 0.19
COL11A1-207ENST00000465209 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-207ENST00000465209 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL11A1-207ENST00000465209 COL14A1Q05707 1796 aaKnown RBP16.23■□□□□ 0.19
COL11A1-207ENST00000465209 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
COL11A1-207ENST00000465209 PSME1Q06323 249 aa16.23■□□□□ 0.19
COL11A1-207ENST00000465209 ZRANB1Q9UGI0 708 aa16.22■□□□□ 0.19
COL11A1-207ENST00000465209 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
COL11A1-207ENST00000465209 PMFBP1Q8TBY8 1022 aa16.21■□□□□ 0.19
COL11A1-207ENST00000465209 ITSN1Q15811 1721 aa16.21■□□□□ 0.19
COL11A1-207ENST00000465209 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.18
COL11A1-207ENST00000465209 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
COL11A1-207ENST00000465209 ATP7BP35670 1465 aa16.2■□□□□ 0.18
COL11A1-207ENST00000465209 TOPAZ1Q8N9V7 1692 aa16.2■□□□□ 0.18
COL11A1-207ENST00000465209 LRP5O75197 1615 aa16.19■□□□□ 0.18
COL11A1-207ENST00000465209 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
COL11A1-207ENST00000465209 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
COL11A1-207ENST00000465209 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
COL11A1-207ENST00000465209 POGKQ9P215 609 aa16.18■□□□□ 0.18
COL11A1-207ENST00000465209 TRAK1Q9UPV9 953 aa16.18■□□□□ 0.18
COL11A1-207ENST00000465209 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
COL11A1-207ENST00000465209 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
COL11A1-207ENST00000465209 TNS1Q9HBL0 1735 aaKnown RBP16.16■□□□□ 0.18
COL11A1-207ENST00000465209 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
COL11A1-207ENST00000465209 RGPD1P0DJD0 1748 aa16.16■□□□□ 0.18
COL11A1-207ENST00000465209 MINK1Q8N4C8 1332 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms