RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 USP46P62068 366 aa11.05□□□□□ -0.64
NUP188-202ENST00000464729 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
NUP188-202ENST00000464729 SPSB2Q99619 263 aa11.05□□□□□ -0.64
NUP188-202ENST00000464729 SALL2Q9Y467 1007 aaPredicted RBP11.05□□□□□ -0.64
NUP188-202ENST00000464729 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
NUP188-202ENST00000464729 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
NUP188-202ENST00000464729 PARP9Q8IXQ6 854 aa11.04□□□□□ -0.64
NUP188-202ENST00000464729 CYB5RLQ6IPT4 315 aa11.03□□□□□ -0.64
NUP188-202ENST00000464729 SLC6A16Q9GZN6 736 aa11.03□□□□□ -0.64
NUP188-202ENST00000464729 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
NUP188-202ENST00000464729 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
NUP188-202ENST00000464729 HOXA2O43364 376 aa11.02□□□□□ -0.65
NUP188-202ENST00000464729 BRICD5Q6PL45 260 aa11.02□□□□□ -0.65
NUP188-202ENST00000464729 PRKD2Q9BZL6 878 aa11.02□□□□□ -0.65
NUP188-202ENST00000464729 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
NUP188-202ENST00000464729 RNF19BQ6ZMZ0 732 aa11.01□□□□□ -0.65
NUP188-202ENST00000464729 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
NUP188-202ENST00000464729 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
NUP188-202ENST00000464729 HLA-CQ95604 372 aa11□□□□□ -0.65
NUP188-202ENST00000464729 Q3C1V9 767 aa10.99□□□□□ -0.65
NUP188-202ENST00000464729 PPEF1O14829 653 aaPredicted RBP10.98□□□□□ -0.65
NUP188-202ENST00000464729 PDE4DQ08499 809 aa10.98□□□□□ -0.65
NUP188-202ENST00000464729 NUTM1Q86Y26 1132 aa10.98□□□□□ -0.65
NUP188-202ENST00000464729 FAM160A2Q8N612 972 aaPredicted RBP10.98□□□□□ -0.65
NUP188-202ENST00000464729 CFTRP13569 1480 aa10.98□□□□□ -0.65
NUP188-202ENST00000464729 RIMBP3CA6NJZ7 1639 aa10.96□□□□□ -0.65
NUP188-202ENST00000464729 RIMBP3BA6NNM3 1639 aa10.96□□□□□ -0.65
NUP188-202ENST00000464729 RIMBP3Q9UFD9 1639 aa10.96□□□□□ -0.65
NUP188-202ENST00000464729 MS4A1P11836 297 aa10.96□□□□□ -0.65
NUP188-202ENST00000464729 MSS51Q4VC12 460 aa10.96□□□□□ -0.65
NUP188-202ENST00000464729 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.65
NUP188-202ENST00000464729 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.65
NUP188-202ENST00000464729 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
NUP188-202ENST00000464729 GUCA2AQ02747 115 aa10.95□□□□□ -0.66
NUP188-202ENST00000464729 BEGAINQ9BUH8 593 aa10.95□□□□□ -0.66
NUP188-202ENST00000464729 PRDM9Q9NQV7 894 aa10.94□□□□□ -0.66
NUP188-202ENST00000464729 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
NUP188-202ENST00000464729 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
NUP188-202ENST00000464729 PLA2G2CQ5R387 149 aa10.92□□□□□ -0.66
NUP188-202ENST00000464729 USB1Q9BQ65 265 aaKnown RBP10.92□□□□□ -0.66
NUP188-202ENST00000464729 FDX1P10109 184 aa10.91□□□□□ -0.66
NUP188-202ENST00000464729 SLC19A1P41440 591 aa10.91□□□□□ -0.66
NUP188-202ENST00000464729 WIZO95785 1651 aa10.91□□□□□ -0.66
NUP188-202ENST00000464729 MOXD2PA6NHM9 499 aa10.9□□□□□ -0.66
NUP188-202ENST00000464729 MMP16P51512 607 aa10.9□□□□□ -0.66
NUP188-202ENST00000464729 LIAT1Q6ZQX7 453 aa10.9□□□□□ -0.66
NUP188-202ENST00000464729 PCDHGC3Q9UN70 934 aa10.9□□□□□ -0.66
NUP188-202ENST00000464729 FCF1Q9Y324 198 aaKnown RBP10.9□□□□□ -0.66
NUP188-202ENST00000464729 TBC1D2Q9BYX2 928 aa10.89□□□□□ -0.67
NUP188-202ENST00000464729 NDUFV2P19404 249 aa10.88□□□□□ -0.67
NUP188-202ENST00000464729 DIXDC1Q155Q3 683 aa10.88□□□□□ -0.67
NUP188-202ENST00000464729 SPRYD7Q5W111 196 aa10.88□□□□□ -0.67
NUP188-202ENST00000464729 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
NUP188-202ENST00000464729 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
NUP188-202ENST00000464729 DXOO77932 396 aaKnown RBP10.87□□□□□ -0.67
NUP188-202ENST00000464729 ZNF608Q9ULD9 1512 aaPredicted RBP10.87□□□□□ -0.67
NUP188-202ENST00000464729 GJA5P36382 358 aa10.86□□□□□ -0.67
NUP188-202ENST00000464729 RETREG3Q86VR2 466 aa10.86□□□□□ -0.67
NUP188-202ENST00000464729 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
NUP188-202ENST00000464729 LAPTM4AQ15012 233 aa10.84□□□□□ -0.67
NUP188-202ENST00000464729 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
NUP188-202ENST00000464729 RPIAP49247 311 aa10.83□□□□□ -0.68
NUP188-202ENST00000464729 C6orf229H3BNL8 230 aa10.82□□□□□ -0.68
NUP188-202ENST00000464729 SPTLC1O15269 473 aa10.82□□□□□ -0.68
NUP188-202ENST00000464729 GFRA3O60609 400 aa10.82□□□□□ -0.68
NUP188-202ENST00000464729 TRIM67Q6ZTA4 783 aa10.82□□□□□ -0.68
NUP188-202ENST00000464729 JUNDP17535 347 aa10.81□□□□□ -0.68
NUP188-202ENST00000464729 ZNF697Q5TEC3 545 aa10.81□□□□□ -0.68
NUP188-202ENST00000464729 NRG2O14511 850 aaPredicted RBP10.8□□□□□ -0.68
NUP188-202ENST00000464729 MYSM1Q5VVJ2 828 aa10.8□□□□□ -0.68
NUP188-202ENST00000464729 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
NUP188-202ENST00000464729 RSF1Q96T23 1441 aaPredicted RBP10.8□□□□□ -0.68
NUP188-202ENST00000464729 ARAP1Q96P48 1450 aa10.8□□□□□ -0.68
NUP188-202ENST00000464729 MTMR2Q13614 643 aa10.79□□□□□ -0.68
NUP188-202ENST00000464729 RIC3Q7Z5B4 369 aa10.79□□□□□ -0.68
NUP188-202ENST00000464729 GPBP1L1Q9HC44 474 aaPredicted RBP10.79□□□□□ -0.68
NUP188-202ENST00000464729 AQRO60306 1485 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP188-202ENST00000464729 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
NUP188-202ENST00000464729 KDM4CQ9H3R0 1056 aa10.78□□□□□ -0.68
NUP188-202ENST00000464729 PCDHB15Q9Y5E8 787 aa10.78□□□□□ -0.68
NUP188-202ENST00000464729 ABCC8Q09428 1581 aa10.77□□□□□ -0.68
NUP188-202ENST00000464729 PRR20EP86478 221 aa10.77□□□□□ -0.69
NUP188-202ENST00000464729 PRR20CP86479 221 aa10.77□□□□□ -0.69
NUP188-202ENST00000464729 PRR20DP86480 221 aa10.77□□□□□ -0.69
NUP188-202ENST00000464729 PRR20BP86481 221 aa10.77□□□□□ -0.69
NUP188-202ENST00000464729 PRR20AP86496 221 aa10.77□□□□□ -0.69
NUP188-202ENST00000464729 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
NUP188-202ENST00000464729 GDF9O60383 454 aa10.76□□□□□ -0.69
NUP188-202ENST00000464729 CD2BP2O95400 341 aaKnown RBP10.76□□□□□ -0.69
NUP188-202ENST00000464729 PRR7Q8TB68 274 aa10.76□□□□□ -0.69
NUP188-202ENST00000464729 LIMD1Q9UGP4 676 aa10.76□□□□□ -0.69
NUP188-202ENST00000464729 TOP2AP11388 1531 aaKnown RBP10.75□□□□□ -0.69
NUP188-202ENST00000464729 ZBTB24O43167 697 aaPredicted RBP10.75□□□□□ -0.69
NUP188-202ENST00000464729 HRCP23327 699 aa10.75□□□□□ -0.69
NUP188-202ENST00000464729 TUSC1Q2TAM9 212 aa10.75□□□□□ -0.69
NUP188-202ENST00000464729 PRPF38BQ5VTL8 546 aaKnown RBP10.75□□□□□ -0.69
NUP188-202ENST00000464729 Q6ZNB5 142 aa10.75□□□□□ -0.69
NUP188-202ENST00000464729 ZBTB3Q9H5J0 574 aa10.75□□□□□ -0.69
NUP188-202ENST00000464729 TRIM32Q13049 653 aa10.74□□□□□ -0.69
NUP188-202ENST00000464729 DESI1Q6ICB0 168 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms