RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 DLC1Q96QB1 1528 aa13.15□□□□□ -0.3
ATF3-207ENST00000464547 USP32Q8NFA0 1604 aa13.15□□□□□ -0.3
ATF3-207ENST00000464547 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
ATF3-207ENST00000464547 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
ATF3-207ENST00000464547 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
ATF3-207ENST00000464547 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
ATF3-207ENST00000464547 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
ATF3-207ENST00000464547 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
ATF3-207ENST00000464547 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
ATF3-207ENST00000464547 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
ATF3-207ENST00000464547 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATF3-207ENST00000464547 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
ATF3-207ENST00000464547 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
ATF3-207ENST00000464547 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
ATF3-207ENST00000464547 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
ATF3-207ENST00000464547 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
ATF3-207ENST00000464547 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
ATF3-207ENST00000464547 SRPK2P78362 688 aaKnown RBP13.12□□□□□ -0.31
ATF3-207ENST00000464547 MORC1Q86VD1 984 aa13.12□□□□□ -0.31
ATF3-207ENST00000464547 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
ATF3-207ENST00000464547 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
ATF3-207ENST00000464547 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
ATF3-207ENST00000464547 TMEM2Q9UHN6 1383 aa13.11□□□□□ -0.31
ATF3-207ENST00000464547 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
ATF3-207ENST00000464547 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
ATF3-207ENST00000464547 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
ATF3-207ENST00000464547 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
ATF3-207ENST00000464547 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
ATF3-207ENST00000464547 NSD2O96028 1365 aa13.09□□□□□ -0.31
ATF3-207ENST00000464547 METP08581 1390 aa13.09□□□□□ -0.31
ATF3-207ENST00000464547 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
ATF3-207ENST00000464547 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
ATF3-207ENST00000464547 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
ATF3-207ENST00000464547 A0A1W2PP64 1363 aa13.08□□□□□ -0.31
ATF3-207ENST00000464547 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
ATF3-207ENST00000464547 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
ATF3-207ENST00000464547 PPP4R2Q9NY27 417 aa13.08□□□□□ -0.32
ATF3-207ENST00000464547 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
ATF3-207ENST00000464547 C3P01024 1663 aa13.07□□□□□ -0.32
ATF3-207ENST00000464547 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
ATF3-207ENST00000464547 ADAMTS13Q76LX8 1427 aa13.05□□□□□ -0.32
ATF3-207ENST00000464547 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
ATF3-207ENST00000464547 TNNT2P45379 298 aaPredicted RBP13.05□□□□□ -0.32
ATF3-207ENST00000464547 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
ATF3-207ENST00000464547 TECPR2O15040 1411 aa13.05□□□□□ -0.32
ATF3-207ENST00000464547 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
ATF3-207ENST00000464547 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
ATF3-207ENST00000464547 LTKP29376 864 aa13.04□□□□□ -0.32
ATF3-207ENST00000464547 TXNDC2Q86VQ3 553 aa13.04□□□□□ -0.32
ATF3-207ENST00000464547 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
ATF3-207ENST00000464547 CABP1Q9NZU7 370 aa13.04□□□□□ -0.32
ATF3-207ENST00000464547 ZNF521Q96K83 1311 aa13.04□□□□□ -0.32
ATF3-207ENST00000464547 MTHFSP49914 203 aa13.03□□□□□ -0.32
ATF3-207ENST00000464547 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
ATF3-207ENST00000464547 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
ATF3-207ENST00000464547 CPS1P31327 1500 aa13.03□□□□□ -0.32
ATF3-207ENST00000464547 SHPRHQ149N8 1683 aa13.02□□□□□ -0.32
ATF3-207ENST00000464547 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
ATF3-207ENST00000464547 MED14O60244 1454 aa13.02□□□□□ -0.33
ATF3-207ENST00000464547 ARHGAP23Q9P227 1491 aa13.02□□□□□ -0.33
ATF3-207ENST00000464547 APAF1O14727 1248 aa13.01□□□□□ -0.33
ATF3-207ENST00000464547 FYB1O15117 783 aa13.01□□□□□ -0.33
ATF3-207ENST00000464547 RRP1P56182 461 aaKnown RBP13.01□□□□□ -0.33
ATF3-207ENST00000464547 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
ATF3-207ENST00000464547 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
ATF3-207ENST00000464547 ATP7BP35670 1465 aa13.01□□□□□ -0.33
ATF3-207ENST00000464547 SLIT1O75093 1534 aa13.01□□□□□ -0.33
ATF3-207ENST00000464547 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
ATF3-207ENST00000464547 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
ATF3-207ENST00000464547 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
ATF3-207ENST00000464547 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
ATF3-207ENST00000464547 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
ATF3-207ENST00000464547 ADRA2BP18089 450 aa12.98□□□□□ -0.33
ATF3-207ENST00000464547 SLFN5Q08AF3 891 aa12.98□□□□□ -0.33
ATF3-207ENST00000464547 NGEFQ8N5V2 710 aa12.98□□□□□ -0.33
ATF3-207ENST00000464547 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
ATF3-207ENST00000464547 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
ATF3-207ENST00000464547 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
ATF3-207ENST00000464547 TRMT2AQ8IZ69 625 aaKnown RBP12.97□□□□□ -0.33
ATF3-207ENST00000464547 THEMISQ8N1K5 641 aaPredicted RBP12.97□□□□□ -0.33
ATF3-207ENST00000464547 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
ATF3-207ENST00000464547 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
ATF3-207ENST00000464547 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
ATF3-207ENST00000464547 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.33
ATF3-207ENST00000464547 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
ATF3-207ENST00000464547 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
ATF3-207ENST00000464547 TBX22Q9Y458 520 aa12.96□□□□□ -0.33
ATF3-207ENST00000464547 COL3A1P02461 1466 aaPredicted RBP12.96□□□□□ -0.34
ATF3-207ENST00000464547 IQSEC2Q5JU85 1478 aa12.95□□□□□ -0.34
ATF3-207ENST00000464547 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
ATF3-207ENST00000464547 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
ATF3-207ENST00000464547 PRR36Q9H6K5 1346 aa12.94□□□□□ -0.34
ATF3-207ENST00000464547 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.94□□□□□ -0.34
ATF3-207ENST00000464547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
ATF3-207ENST00000464547 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
ATF3-207ENST00000464547 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
ATF3-207ENST00000464547 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
ATF3-207ENST00000464547 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
ATF3-207ENST00000464547 EDC4Q6P2E9 1401 aaKnown RBP12.93□□□□□ -0.34
ATF3-207ENST00000464547 E9PSI1 815 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms