RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 PLEKHH1Q9ULM0 1364 aa26.87■■□□□ 1.89
HMG20B-208ENST00000464304 FAM135BQ49AJ0 1406 aa26.85■■□□□ 1.89
HMG20B-208ENST00000464304 WAPLQ7Z5K2 1190 aa26.85■■□□□ 1.89
HMG20B-208ENST00000464304 TRAK1Q9UPV9 953 aa26.84■■□□□ 1.89
HMG20B-208ENST00000464304 SIRT1Q96EB6 747 aa26.82■■□□□ 1.88
HMG20B-208ENST00000464304 C19orf44Q9H6X5 657 aa26.82■■□□□ 1.88
HMG20B-208ENST00000464304 RALGAPBQ86X10 1494 aa26.81■■□□□ 1.88
HMG20B-208ENST00000464304 TIMELESSQ9UNS1 1208 aa26.81■■□□□ 1.88
HMG20B-208ENST00000464304 DCCP43146 1447 aa26.81■■□□□ 1.88
HMG20B-208ENST00000464304 ROCK2O75116 1388 aaKnown RBP26.8■■□□□ 1.88
HMG20B-208ENST00000464304 POTEAQ6S8J7 498 aa26.79■■□□□ 1.88
HMG20B-208ENST00000464304 PRAM1Q96QH2 718 aa26.79■■□□□ 1.88
HMG20B-208ENST00000464304 CDC42BPGQ6DT37 1551 aa26.79■■□□□ 1.88
HMG20B-208ENST00000464304 ROBO1Q9Y6N7 1651 aa26.77■■□□□ 1.88
HMG20B-208ENST00000464304 SAFB2Q14151 953 aaKnown RBP eCLIP26.76■■□□□ 1.87
HMG20B-208ENST00000464304 FMN2Q9NZ56 1722 aa26.76■■□□□ 1.87
HMG20B-208ENST00000464304 GPRASP1Q5JY77 1395 aa26.75■■□□□ 1.87
HMG20B-208ENST00000464304 ATF3P18847 181 aa26.75■■□□□ 1.87
HMG20B-208ENST00000464304 CADPS2Q86UW7 1296 aa26.75■■□□□ 1.87
HMG20B-208ENST00000464304 POGKQ9P215 609 aa26.75■■□□□ 1.87
HMG20B-208ENST00000464304 QRICH2Q9H0J4 1663 aa26.75■■□□□ 1.87
HMG20B-208ENST00000464304 ADGRB2O60241 1585 aa26.74■■□□□ 1.87
HMG20B-208ENST00000464304 RGPD8O14715 1765 aaPredicted RBP26.73■■□□□ 1.87
HMG20B-208ENST00000464304 MST1RQ04912 1400 aa26.73■■□□□ 1.87
HMG20B-208ENST00000464304 SLAIN2Q9P270 581 aa26.7■■□□□ 1.86
HMG20B-208ENST00000464304 CARD11Q9BXL7 1154 aa26.67■■□□□ 1.86
HMG20B-208ENST00000464304 MINK1Q8N4C8 1332 aaPredicted RBP26.66■■□□□ 1.86
HMG20B-208ENST00000464304 C1orf167Q5SNV9 1468 aa26.64■■□□□ 1.86
HMG20B-208ENST00000464304 HIRIP3Q9BW71 556 aaPredicted RBP26.64■■□□□ 1.86
HMG20B-208ENST00000464304 USP32Q8NFA0 1604 aa26.64■■□□□ 1.85
HMG20B-208ENST00000464304 CENPJQ9HC77 1338 aaPredicted RBP26.64■■□□□ 1.85
HMG20B-208ENST00000464304 EIF3AQ14152 1382 aaKnown RBP26.62■■□□□ 1.85
HMG20B-208ENST00000464304 PHLPP1O60346 1717 aa26.62■■□□□ 1.85
HMG20B-208ENST00000464304 NHSL1Q5SYE7 1610 aa26.61■■□□□ 1.85
HMG20B-208ENST00000464304 NUTM2FA1L443 756 aa26.6■■□□□ 1.85
HMG20B-208ENST00000464304 BRINP3Q76B58 766 aa26.58■■□□□ 1.85
HMG20B-208ENST00000464304 TULP4Q9NRJ4 1543 aa26.57■■□□□ 1.84
HMG20B-208ENST00000464304 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
HMG20B-208ENST00000464304 AHDC1Q5TGY3 1603 aaPredicted RBP26.56■■□□□ 1.84
HMG20B-208ENST00000464304 KIF1AQ12756 1690 aa26.55■■□□□ 1.84
HMG20B-208ENST00000464304 WASLO00401 505 aaPredicted RBP26.55■■□□□ 1.84
HMG20B-208ENST00000464304 ORAI2Q96SN7 254 aa26.55■■□□□ 1.84
HMG20B-208ENST00000464304 ANKARQ7Z5J8 1434 aa26.53■■□□□ 1.84
HMG20B-208ENST00000464304 COL16A1Q07092 1604 aaPredicted RBP26.53■■□□□ 1.84
HMG20B-208ENST00000464304 TOPAZ1Q8N9V7 1692 aa26.53■■□□□ 1.84
HMG20B-208ENST00000464304 USP47Q96K76 1375 aa26.51■■□□□ 1.83
HMG20B-208ENST00000464304 PRR36Q9H6K5 1346 aa26.51■■□□□ 1.83
HMG20B-208ENST00000464304 ATP7BP35670 1465 aa26.5■■□□□ 1.83
HMG20B-208ENST00000464304 ESCO1Q5FWF5 840 aa26.5■■□□□ 1.83
HMG20B-208ENST00000464304 CDK19Q9BWU1 502 aa26.5■■□□□ 1.83
HMG20B-208ENST00000464304 LRP6O75581 1613 aa26.5■■□□□ 1.83
HMG20B-208ENST00000464304 SBNO2Q9Y2G9 1366 aa26.49■■□□□ 1.83
HMG20B-208ENST00000464304 DDX17Q92841 729 aaKnown RBP26.46■■□□□ 1.83
HMG20B-208ENST00000464304 ST20-MTHFSA0A0A6YYL1 179 aa26.45■■□□□ 1.82
HMG20B-208ENST00000464304 EVC2Q86UK5 1308 aa26.43■■□□□ 1.82
HMG20B-208ENST00000464304 SRPK2P78362 688 aaKnown RBP26.43■■□□□ 1.82
HMG20B-208ENST00000464304 NUDT16Q96DE0 195 aaKnown RBP26.43■■□□□ 1.82
HMG20B-208ENST00000464304 JCADQ9P266 1359 aa26.43■■□□□ 1.82
HMG20B-208ENST00000464304 CABP2Q9NPB3 220 aa26.42■■□□□ 1.82
HMG20B-208ENST00000464304 PHF8Q9UPP1 1060 aa26.42■■□□□ 1.82
HMG20B-208ENST00000464304 TESK2Q96S53 571 aa26.41■■□□□ 1.82
HMG20B-208ENST00000464304 PXDNQ92626 1479 aa26.39■■□□□ 1.82
HMG20B-208ENST00000464304 FOXO3O43524 673 aa26.39■■□□□ 1.82
HMG20B-208ENST00000464304 PMFBP1Q8TBY8 1022 aa26.39■■□□□ 1.82
HMG20B-208ENST00000464304 SHPRHQ149N8 1683 aa26.38■■□□□ 1.81
HMG20B-208ENST00000464304 NPHP3Q7Z494 1330 aa26.38■■□□□ 1.81
HMG20B-208ENST00000464304 SOS2Q07890 1332 aaPredicted RBP26.37■■□□□ 1.81
HMG20B-208ENST00000464304 CCDC61Q9Y6R9 512 aa26.36■■□□□ 1.81
HMG20B-208ENST00000464304 TRPM3Q9HCF6 1732 aaPredicted RBP26.36■■□□□ 1.81
HMG20B-208ENST00000464304 XPCQ01831 940 aaPredicted RBP26.35■■□□□ 1.81
HMG20B-208ENST00000464304 PPIP5K1Q6PFW1 1433 aa26.35■■□□□ 1.81
HMG20B-208ENST00000464304 AKAP12Q02952 1782 aa26.34■■□□□ 1.81
HMG20B-208ENST00000464304 UPF1Q92900 1129 aaKnown RBP eCLIP26.33■■□□□ 1.81
HMG20B-208ENST00000464304 EIF4G2P78344 907 aaKnown RBP eCLIP26.32■■□□□ 1.8
HMG20B-208ENST00000464304 HSPA5P11021 654 aaKnown RBP26.31■■□□□ 1.8
HMG20B-208ENST00000464304 ATAD2Q6PL18 1390 aa26.31■■□□□ 1.8
HMG20B-208ENST00000464304 PLEKHG3A1L390 1219 aa26.29■■□□□ 1.8
HMG20B-208ENST00000464304 KRT28Q7Z3Y7 464 aa26.29■■□□□ 1.8
HMG20B-208ENST00000464304 NGDNQ8NEJ9 315 aaKnown RBP26.29■■□□□ 1.8
HMG20B-208ENST00000464304 LRRC59Q96AG4 307 aaKnown RBP26.29■■□□□ 1.8
HMG20B-208ENST00000464304 POLR3AO14802 1390 aaPredicted RBP26.29■■□□□ 1.8
HMG20B-208ENST00000464304 ALS2Q96Q42 1657 aa26.28■■□□□ 1.8
HMG20B-208ENST00000464304 SLC24A1O60721 1099 aa26.27■■□□□ 1.8
HMG20B-208ENST00000464304 TMF1P82094 1093 aa26.27■■□□□ 1.8
HMG20B-208ENST00000464304 PSME1Q06323 249 aa26.27■■□□□ 1.8
HMG20B-208ENST00000464304 CABP1Q9NZU7 370 aa26.27■■□□□ 1.8
HMG20B-208ENST00000464304 ACEP12821 1306 aa26.27■■□□□ 1.8
HMG20B-208ENST00000464304 COL22A1Q8NFW1 1626 aaPredicted RBP26.27■■□□□ 1.8
HMG20B-208ENST00000464304 PNPLA6Q8IY17 1366 aa26.26■■□□□ 1.79
HMG20B-208ENST00000464304 MON2Q7Z3U7 1717 aa26.25■■□□□ 1.79
HMG20B-208ENST00000464304 MEX3CQ5U5Q3 659 aaKnown RBP26.25■■□□□ 1.79
HMG20B-208ENST00000464304 SPATA31A6Q5VVP1 1343 aa26.24■■□□□ 1.79
HMG20B-208ENST00000464304 MYOM1P52179 1685 aa26.24■■□□□ 1.79
HMG20B-208ENST00000464304 TNS3Q68CZ2 1445 aa26.23■■□□□ 1.79
HMG20B-208ENST00000464304 SBNO1A3KN83 1393 aa26.23■■□□□ 1.79
HMG20B-208ENST00000464304 PUS7Q96PZ0 661 aaKnown RBP26.23■■□□□ 1.79
HMG20B-208ENST00000464304 SPATA31A3Q5VYP0 1347 aa26.22■■□□□ 1.79
HMG20B-208ENST00000464304 ABCA3Q99758 1704 aa26.21■■□□□ 1.79
HMG20B-208ENST00000464304 NRKQ7Z2Y5 1582 aa26.2■■□□□ 1.79
HMG20B-208ENST00000464304 CD163L1Q9NR16 1453 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms