RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 DIP2AQ14689 1571 aa19.78■□□□□ 0.76
COL5A1-205ENST00000464187 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
COL5A1-205ENST00000464187 PTPRUQ92729 1446 aa19.77■□□□□ 0.75
COL5A1-205ENST00000464187 PANK3Q9H999 370 aa19.76■□□□□ 0.75
COL5A1-205ENST00000464187 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
COL5A1-205ENST00000464187 TULP4Q9NRJ4 1543 aa19.75■□□□□ 0.75
COL5A1-205ENST00000464187 AMOTL2Q9Y2J4 779 aa19.75■□□□□ 0.75
COL5A1-205ENST00000464187 KNDC1Q76NI1 1749 aa19.75■□□□□ 0.75
COL5A1-205ENST00000464187 ROBO2Q9HCK4 1378 aa19.75■□□□□ 0.75
COL5A1-205ENST00000464187 CPS1P31327 1500 aa19.74■□□□□ 0.75
COL5A1-205ENST00000464187 NCKAP5LQ9HCH0 1330 aa19.74■□□□□ 0.75
COL5A1-205ENST00000464187 PUS7Q96PZ0 661 aaKnown RBP19.74■□□□□ 0.75
COL5A1-205ENST00000464187 PER1O15534 1290 aaPredicted RBP19.73■□□□□ 0.75
COL5A1-205ENST00000464187 NPHP4O75161 1426 aaPredicted RBP19.73■□□□□ 0.75
COL5A1-205ENST00000464187 PIK3R4Q99570 1358 aa19.73■□□□□ 0.75
COL5A1-205ENST00000464187 CABP2Q9NPB3 220 aa19.72■□□□□ 0.75
COL5A1-205ENST00000464187 SRPK2P78362 688 aaKnown RBP19.72■□□□□ 0.75
COL5A1-205ENST00000464187 FAM9BQ8IZU0 186 aa19.72■□□□□ 0.75
COL5A1-205ENST00000464187 FKBP8Q14318 412 aa19.71■□□□□ 0.75
COL5A1-205ENST00000464187 MYOM1P52179 1685 aa19.7■□□□□ 0.74
COL5A1-205ENST00000464187 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
COL5A1-205ENST00000464187 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
COL5A1-205ENST00000464187 CDK19Q9BWU1 502 aa19.69■□□□□ 0.74
COL5A1-205ENST00000464187 HSPA2P54652 639 aa19.69■□□□□ 0.74
COL5A1-205ENST00000464187 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
COL5A1-205ENST00000464187 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
COL5A1-205ENST00000464187 KCNA6P17658 529 aa19.67■□□□□ 0.74
COL5A1-205ENST00000464187 NEFLP07196 543 aa19.67■□□□□ 0.74
COL5A1-205ENST00000464187 LMTK3Q96Q04 1460 aa19.66■□□□□ 0.74
COL5A1-205ENST00000464187 ATAD2Q6PL18 1390 aa19.66■□□□□ 0.74
COL5A1-205ENST00000464187 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
COL5A1-205ENST00000464187 KNSTRNQ9Y448 316 aa19.65■□□□□ 0.74
COL5A1-205ENST00000464187 ZBED9Q6R2W3 1325 aa19.65■□□□□ 0.74
COL5A1-205ENST00000464187 XRN1Q8IZH2 1706 aaKnown RBP19.64■□□□□ 0.74
COL5A1-205ENST00000464187 KTN1Q86UP2 1357 aaKnown RBP19.64■□□□□ 0.73
COL5A1-205ENST00000464187 NINLQ9Y2I6 1382 aa19.62■□□□□ 0.73
COL5A1-205ENST00000464187 CARD14Q9BXL6 1004 aa19.62■□□□□ 0.73
COL5A1-205ENST00000464187 CC2D1BQ5T0F9 858 aaKnown RBP19.6■□□□□ 0.73
COL5A1-205ENST00000464187 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.6■□□□□ 0.73
COL5A1-205ENST00000464187 RALBP1Q15311 655 aa19.6■□□□□ 0.73
COL5A1-205ENST00000464187 AMER1Q5JTC6 1135 aaPredicted RBP19.6■□□□□ 0.73
COL5A1-205ENST00000464187 ANKRD36BQ8N2N9 1353 aa19.6■□□□□ 0.73
COL5A1-205ENST00000464187 CHD2O14647 1828 aaKnown RBP19.59■□□□□ 0.73
COL5A1-205ENST00000464187 MYBBP1AQ9BQG0 1328 aaKnown RBP19.58■□□□□ 0.73
COL5A1-205ENST00000464187 CABP1Q9NZU7 370 aa19.58■□□□□ 0.73
COL5A1-205ENST00000464187 ADGRB2O60241 1585 aa19.58■□□□□ 0.72
COL5A1-205ENST00000464187 PARD3Q8TEW0 1356 aa19.58■□□□□ 0.72
COL5A1-205ENST00000464187 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
COL5A1-205ENST00000464187 NUDT16Q96DE0 195 aaKnown RBP19.56■□□□□ 0.72
COL5A1-205ENST00000464187 NSD3Q9BZ95 1437 aa19.56■□□□□ 0.72
COL5A1-205ENST00000464187 A0A1W2PP64 1363 aa19.56■□□□□ 0.72
COL5A1-205ENST00000464187 PNISRQ8TF01 805 aaKnown RBP19.55■□□□□ 0.72
COL5A1-205ENST00000464187 NPC1L1Q9UHC9 1359 aa19.55■□□□□ 0.72
COL5A1-205ENST00000464187 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
COL5A1-205ENST00000464187 CCDC61Q9Y6R9 512 aa19.55■□□□□ 0.72
COL5A1-205ENST00000464187 CD163L1Q9NR16 1453 aa19.54■□□□□ 0.72
COL5A1-205ENST00000464187 PRR36Q9H6K5 1346 aa19.54■□□□□ 0.72
COL5A1-205ENST00000464187 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
COL5A1-205ENST00000464187 ATP7BP35670 1465 aa19.53■□□□□ 0.72
COL5A1-205ENST00000464187 PPIP5K1Q6PFW1 1433 aa19.53■□□□□ 0.72
COL5A1-205ENST00000464187 NUTM2FA1L443 756 aa19.53■□□□□ 0.72
COL5A1-205ENST00000464187 HDGFL2Q7Z4V5 671 aaPredicted RBP19.52■□□□□ 0.72
COL5A1-205ENST00000464187 NWD1Q149M9 1564 aa19.52■□□□□ 0.71
COL5A1-205ENST00000464187 CGNL1Q0VF96 1302 aa19.5■□□□□ 0.71
COL5A1-205ENST00000464187 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
COL5A1-205ENST00000464187 NLRP13Q86W25 1043 aa19.48■□□□□ 0.71
COL5A1-205ENST00000464187 PROSER2Q86WR7 435 aaPredicted RBP19.48■□□□□ 0.71
COL5A1-205ENST00000464187 NKTRP30414 1462 aaKnown RBP19.48■□□□□ 0.71
COL5A1-205ENST00000464187 SMG6Q86US8 1419 aaKnown RBP19.47■□□□□ 0.71
COL5A1-205ENST00000464187 CPSF1Q10570 1443 aaKnown RBP19.47■□□□□ 0.71
COL5A1-205ENST00000464187 ADGRL3Q9HAR2 1447 aa19.47■□□□□ 0.71
COL5A1-205ENST00000464187 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
COL5A1-205ENST00000464187 USP32Q8NFA0 1604 aa19.45■□□□□ 0.7
COL5A1-205ENST00000464187 NALCNQ8IZF0 1738 aa19.45■□□□□ 0.7
COL5A1-205ENST00000464187 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
COL5A1-205ENST00000464187 IRX6P78412 446 aaPredicted RBP19.44■□□□□ 0.7
COL5A1-205ENST00000464187 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
COL5A1-205ENST00000464187 PPP2R1AP30153 589 aa19.44■□□□□ 0.7
COL5A1-205ENST00000464187 NSD2O96028 1365 aa19.43■□□□□ 0.7
COL5A1-205ENST00000464187 ANKARQ7Z5J8 1434 aa19.43■□□□□ 0.7
COL5A1-205ENST00000464187 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
COL5A1-205ENST00000464187 ZNF692Q9BU19 519 aaPredicted RBP19.43■□□□□ 0.7
COL5A1-205ENST00000464187 ACEP12821 1306 aa19.42■□□□□ 0.7
COL5A1-205ENST00000464187 TOPAZ1Q8N9V7 1692 aa19.42■□□□□ 0.7
COL5A1-205ENST00000464187 FYB1O15117 783 aa19.41■□□□□ 0.7
COL5A1-205ENST00000464187 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
COL5A1-205ENST00000464187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL5A1-205ENST00000464187 PMFBP1Q8TBY8 1022 aa19.41■□□□□ 0.7
COL5A1-205ENST00000464187 EDC4Q6P2E9 1401 aaKnown RBP19.4■□□□□ 0.7
COL5A1-205ENST00000464187 TMEM94Q12767 1356 aa19.4■□□□□ 0.7
COL5A1-205ENST00000464187 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
COL5A1-205ENST00000464187 FMN2Q9NZ56 1722 aa19.4■□□□□ 0.7
COL5A1-205ENST00000464187 STRCP1A6NGW2 1772 aa19.4■□□□□ 0.7
COL5A1-205ENST00000464187 NUDCQ9Y266 331 aa19.39■□□□□ 0.7
COL5A1-205ENST00000464187 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
COL5A1-205ENST00000464187 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
COL5A1-205ENST00000464187 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
COL5A1-205ENST00000464187 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
COL5A1-205ENST00000464187 ZNF335Q9H4Z2 1342 aaPredicted RBP19.37■□□□□ 0.69
COL5A1-205ENST00000464187 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms