RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 RRP1P56182 461 aaKnown RBP23.18■■□□□ 1.3
LMO2-204ENST00000464025 CGNL1Q0VF96 1302 aa23.17■■□□□ 1.3
LMO2-204ENST00000464025 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
LMO2-204ENST00000464025 STAG3Q9UJ98 1225 aa23.17■■□□□ 1.3
LMO2-204ENST00000464025 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
LMO2-204ENST00000464025 SALL2Q9Y467 1007 aaPredicted RBP23.16■■□□□ 1.3
LMO2-204ENST00000464025 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
LMO2-204ENST00000464025 ZMYM3Q14202 1370 aa23.15■■□□□ 1.3
LMO2-204ENST00000464025 PLEKHH1Q9ULM0 1364 aa23.15■■□□□ 1.3
LMO2-204ENST00000464025 MORC1Q86VD1 984 aa23.14■■□□□ 1.3
LMO2-204ENST00000464025 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.29
LMO2-204ENST00000464025 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
LMO2-204ENST00000464025 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
LMO2-204ENST00000464025 MED14O60244 1454 aa23.11■■□□□ 1.29
LMO2-204ENST00000464025 ABCC11Q96J66 1382 aa23.11■■□□□ 1.29
LMO2-204ENST00000464025 CABP2Q9NPB3 220 aa23.1■■□□□ 1.29
LMO2-204ENST00000464025 STK26Q9P289 416 aa23.1■■□□□ 1.29
LMO2-204ENST00000464025 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
LMO2-204ENST00000464025 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
LMO2-204ENST00000464025 ANKRD26Q9UPS8 1709 aa23.09■■□□□ 1.29
LMO2-204ENST00000464025 GOLGA2Q08379 1002 aa23.09■■□□□ 1.29
LMO2-204ENST00000464025 TRMT2AQ8IZ69 625 aaKnown RBP23.09■■□□□ 1.29
LMO2-204ENST00000464025 ESF1Q9H501 851 aaKnown RBP23.09■■□□□ 1.29
LMO2-204ENST00000464025 MLECQ14165 292 aa23.08■■□□□ 1.29
LMO2-204ENST00000464025 POGKQ9P215 609 aa23.08■■□□□ 1.29
LMO2-204ENST00000464025 DUSP27Q5VZP5 1158 aa23.07■■□□□ 1.28
LMO2-204ENST00000464025 RBM19Q9Y4C8 960 aaKnown RBP23.07■■□□□ 1.28
LMO2-204ENST00000464025 HDGFP51858 240 aaKnown RBP23.06■■□□□ 1.28
LMO2-204ENST00000464025 A0A1W2PP64 1363 aa23.06■■□□□ 1.28
LMO2-204ENST00000464025 NCBP3Q53F19 620 aaKnown RBP23.06■■□□□ 1.28
LMO2-204ENST00000464025 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
LMO2-204ENST00000464025 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
LMO2-204ENST00000464025 SRPK2P78362 688 aaKnown RBP23.05■■□□□ 1.28
LMO2-204ENST00000464025 SLFN5Q08AF3 891 aa23.05■■□□□ 1.28
LMO2-204ENST00000464025 CCDC136Q96JN2 1154 aa23.05■■□□□ 1.28
LMO2-204ENST00000464025 SIRT1Q96EB6 747 aa23.04■■□□□ 1.28
LMO2-204ENST00000464025 TERF2IPQ9NYB0 399 aa23.04■■□□□ 1.28
LMO2-204ENST00000464025 TNRQ92752 1358 aa23.04■■□□□ 1.28
LMO2-204ENST00000464025 UBR1Q8IWV7 1749 aa23.02■■□□□ 1.28
LMO2-204ENST00000464025 APAF1O14727 1248 aa23.02■■□□□ 1.28
LMO2-204ENST00000464025 SAFB2Q14151 953 aaKnown RBP eCLIP23.02■■□□□ 1.28
LMO2-204ENST00000464025 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
LMO2-204ENST00000464025 MINK1Q8N4C8 1332 aaPredicted RBP23.02■■□□□ 1.28
LMO2-204ENST00000464025 TECPR2O15040 1411 aa23.01■■□□□ 1.27
LMO2-204ENST00000464025 CDK19Q9BWU1 502 aa23.01■■□□□ 1.27
LMO2-204ENST00000464025 NLRP1Q9C000 1473 aa23■■□□□ 1.27
LMO2-204ENST00000464025 MTHFSP49914 203 aa23■■□□□ 1.27
LMO2-204ENST00000464025 CCDC146Q8IYE0 955 aa23■■□□□ 1.27
LMO2-204ENST00000464025 FAM135BQ49AJ0 1406 aa22.99■■□□□ 1.27
LMO2-204ENST00000464025 ATP7BP35670 1465 aa22.99■■□□□ 1.27
LMO2-204ENST00000464025 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
LMO2-204ENST00000464025 E9PSI1 815 aa22.97■■□□□ 1.27
LMO2-204ENST00000464025 RUNDC1Q96C34 613 aa22.97■■□□□ 1.27
LMO2-204ENST00000464025 KIF20BQ96Q89 1820 aa22.97■■□□□ 1.27
LMO2-204ENST00000464025 HDGFL2Q7Z4V5 671 aaPredicted RBP22.97■■□□□ 1.27
LMO2-204ENST00000464025 EXOC6Q8TAG9 804 aa22.97■■□□□ 1.27
LMO2-204ENST00000464025 NKTRP30414 1462 aaKnown RBP22.96■■□□□ 1.27
LMO2-204ENST00000464025 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
LMO2-204ENST00000464025 CPS1P31327 1500 aa22.96■■□□□ 1.27
LMO2-204ENST00000464025 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.27
LMO2-204ENST00000464025 FYB1O15117 783 aa22.93■■□□□ 1.26
LMO2-204ENST00000464025 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
LMO2-204ENST00000464025 TNNT2P45379 298 aaPredicted RBP22.93■■□□□ 1.26
LMO2-204ENST00000464025 METP08581 1390 aa22.92■■□□□ 1.26
LMO2-204ENST00000464025 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
LMO2-204ENST00000464025 COL3A1P02461 1466 aaPredicted RBP22.92■■□□□ 1.26
LMO2-204ENST00000464025 ADGRB2O60241 1585 aa22.91■■□□□ 1.26
LMO2-204ENST00000464025 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.91■■□□□ 1.26
LMO2-204ENST00000464025 WAPLQ7Z5K2 1190 aa22.9■■□□□ 1.26
LMO2-204ENST00000464025 WDR63Q8IWG1 891 aa22.89■■□□□ 1.26
LMO2-204ENST00000464025 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.26
LMO2-204ENST00000464025 CABP1Q9NZU7 370 aa22.89■■□□□ 1.26
LMO2-204ENST00000464025 CPSF1Q10570 1443 aaKnown RBP22.89■■□□□ 1.25
LMO2-204ENST00000464025 WASLO00401 505 aaPredicted RBP22.89■■□□□ 1.25
LMO2-204ENST00000464025 SPINK5Q9NQ38 1064 aaPredicted RBP22.89■■□□□ 1.25
LMO2-204ENST00000464025 PNPLA6Q8IY17 1366 aa22.88■■□□□ 1.25
LMO2-204ENST00000464025 FANCIQ9NVI1 1328 aa22.88■■□□□ 1.25
LMO2-204ENST00000464025 PLEKHG1Q9ULL1 1385 aa22.87■■□□□ 1.25
LMO2-204ENST00000464025 GGNBP2Q9H3C7 697 aa22.87■■□□□ 1.25
LMO2-204ENST00000464025 ADAMTS13Q76LX8 1427 aa22.87■■□□□ 1.25
LMO2-204ENST00000464025 C3P01024 1663 aa22.86■■□□□ 1.25
LMO2-204ENST00000464025 TCP11L2Q8N4U5 519 aa22.86■■□□□ 1.25
LMO2-204ENST00000464025 PLIN1O60240 522 aa22.85■■□□□ 1.25
LMO2-204ENST00000464025 CDC42BPGQ6DT37 1551 aa22.85■■□□□ 1.25
LMO2-204ENST00000464025 CRBNQ96SW2 442 aa22.84■■□□□ 1.25
LMO2-204ENST00000464025 SLIT1O75093 1534 aa22.84■■□□□ 1.25
LMO2-204ENST00000464025 EDC4Q6P2E9 1401 aaKnown RBP22.83■■□□□ 1.25
LMO2-204ENST00000464025 MON2Q7Z3U7 1717 aa22.83■■□□□ 1.24
LMO2-204ENST00000464025 ARHGAP23Q9P227 1491 aa22.83■■□□□ 1.24
LMO2-204ENST00000464025 DMRT2Q9Y5R5 561 aa22.82■■□□□ 1.24
LMO2-204ENST00000464025 FER1L4A9Z1Z3 1794 aa22.82■■□□□ 1.24
LMO2-204ENST00000464025 AKAP12Q02952 1782 aa22.82■■□□□ 1.24
LMO2-204ENST00000464025 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
LMO2-204ENST00000464025 PPIP5K1Q6PFW1 1433 aa22.8■■□□□ 1.24
LMO2-204ENST00000464025 U2AF1L5P0DN76 240 aaPredicted RBP22.8■■□□□ 1.24
LMO2-204ENST00000464025 U2AF1Q01081 240 aaKnown RBP eCLIP22.8■■□□□ 1.24
LMO2-204ENST00000464025 PLEKHF1Q96S99 279 aa22.79■■□□□ 1.24
LMO2-204ENST00000464025 CCDC61Q9Y6R9 512 aa22.79■■□□□ 1.24
LMO2-204ENST00000464025 PNNQ9H307 717 aaKnown RBP22.78■■□□□ 1.24
LMO2-204ENST00000464025 C20orf194Q5TEA3 1177 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms