RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 RSBN1LQ6PCB5 846 aaPredicted RBP14.45□□□□□ -0.1
CCDC144A-211ENST00000463809 SYMPKQ92797 1274 aaKnown RBP14.45□□□□□ -0.1
CCDC144A-211ENST00000463809 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
CCDC144A-211ENST00000463809 MYSM1Q5VVJ2 828 aa14.44□□□□□ -0.1
CCDC144A-211ENST00000463809 USB1Q9BQ65 265 aaKnown RBP14.44□□□□□ -0.1
CCDC144A-211ENST00000463809 PPEF1O14829 653 aaPredicted RBP14.43□□□□□ -0.1
CCDC144A-211ENST00000463809 SPTLC1O15269 473 aa14.43□□□□□ -0.1
CCDC144A-211ENST00000463809 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
CCDC144A-211ENST00000463809 PRDM9Q9NQV7 894 aa14.43□□□□□ -0.1
CCDC144A-211ENST00000463809 RIC3Q7Z5B4 369 aa14.41□□□□□ -0.1
CCDC144A-211ENST00000463809 ANKLE1Q8NAG6 615 aa14.41□□□□□ -0.1
CCDC144A-211ENST00000463809 DDRGK1Q96HY6 314 aa14.41□□□□□ -0.1
CCDC144A-211ENST00000463809 PLEKHG3A1L390 1219 aa14.4□□□□□ -0.1
CCDC144A-211ENST00000463809 PCDHB15Q9Y5E8 787 aa14.4□□□□□ -0.1
CCDC144A-211ENST00000463809 RETREG3Q86VR2 466 aa14.39□□□□□ -0.11
CCDC144A-211ENST00000463809 C6orf229H3BNL8 230 aa14.38□□□□□ -0.11
CCDC144A-211ENST00000463809 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
CCDC144A-211ENST00000463809 LIMD1Q9UGP4 676 aa14.38□□□□□ -0.11
CCDC144A-211ENST00000463809 MMP16P51512 607 aa14.37□□□□□ -0.11
CCDC144A-211ENST00000463809 PRKD2Q9BZL6 878 aa14.36□□□□□ -0.11
CCDC144A-211ENST00000463809 DXOO77932 396 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-211ENST00000463809 MTMR2Q13614 643 aa14.35□□□□□ -0.11
CCDC144A-211ENST00000463809 EMID1Q96A84 441 aaPredicted RBP14.35□□□□□ -0.11
CCDC144A-211ENST00000463809 TUSC1Q2TAM9 212 aa14.34□□□□□ -0.11
CCDC144A-211ENST00000463809 PLA2G2CQ5R387 149 aa14.34□□□□□ -0.11
CCDC144A-211ENST00000463809 CLK2P49760 499 aaKnown RBP14.33□□□□□ -0.12
CCDC144A-211ENST00000463809 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
CCDC144A-211ENST00000463809 FCF1Q9Y324 198 aaKnown RBP14.33□□□□□ -0.12
CCDC144A-211ENST00000463809 V9GY48 417 aaPredicted RBP14.33□□□□□ -0.12
CCDC144A-211ENST00000463809 SPDYE5A6NIY4 337 aa14.32□□□□□ -0.12
CCDC144A-211ENST00000463809 HRCP23327 699 aa14.32□□□□□ -0.12
CCDC144A-211ENST00000463809 CSPP1Q1MSJ5 1256 aa14.32□□□□□ -0.12
CCDC144A-211ENST00000463809 SH3D19Q5HYK7 790 aa14.31□□□□□ -0.12
CCDC144A-211ENST00000463809 PRPF38BQ5VTL8 546 aaKnown RBP14.31□□□□□ -0.12
CCDC144A-211ENST00000463809 ZBTB3Q9H5J0 574 aa14.31□□□□□ -0.12
CCDC144A-211ENST00000463809 JUNDP17535 347 aa14.3□□□□□ -0.12
CCDC144A-211ENST00000463809 SKIV2LQ15477 1246 aaKnown RBP14.3□□□□□ -0.12
CCDC144A-211ENST00000463809 CABLES1Q8TDN4 633 aa14.3□□□□□ -0.12
CCDC144A-211ENST00000463809 QPCTQ16769 361 aa14.29□□□□□ -0.12
CCDC144A-211ENST00000463809 LIAT1Q6ZQX7 453 aa14.29□□□□□ -0.12
CCDC144A-211ENST00000463809 PRR7Q8TB68 274 aa14.29□□□□□ -0.12
CCDC144A-211ENST00000463809 SLC19A1P41440 591 aa14.28□□□□□ -0.12
CCDC144A-211ENST00000463809 IL27Q8NEV9 243 aa14.28□□□□□ -0.12
CCDC144A-211ENST00000463809 LILRB3O75022 631 aa14.27□□□□□ -0.13
CCDC144A-211ENST00000463809 CFAP99D6REC4 459 aa14.25□□□□□ -0.13
CCDC144A-211ENST00000463809 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
CCDC144A-211ENST00000463809 DESI1Q6ICB0 168 aa14.24□□□□□ -0.13
CCDC144A-211ENST00000463809 SPRYD7Q5W111 196 aa14.23□□□□□ -0.13
CCDC144A-211ENST00000463809 NUTM2BA6NNL0 878 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-211ENST00000463809 NUTM2EB1AL46 878 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-211ENST00000463809 RTL5Q5HYW3 569 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-211ENST00000463809 NUTM2DQ5VT03 806 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-211ENST00000463809 NUTM2AQ8IVF1 878 aaPredicted RBP14.22□□□□□ -0.13
CCDC144A-211ENST00000463809 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC144A-211ENST00000463809 GOPCQ9HD26 462 aa14.21□□□□□ -0.13
CCDC144A-211ENST00000463809 RPIAP49247 311 aa14.2□□□□□ -0.14
CCDC144A-211ENST00000463809 FBXO31Q5XUX0 539 aaPredicted RBP14.2□□□□□ -0.14
CCDC144A-211ENST00000463809 NUDT12Q9BQG2 462 aa14.2□□□□□ -0.14
CCDC144A-211ENST00000463809 PTPRNQ16849 979 aa14.19□□□□□ -0.14
CCDC144A-211ENST00000463809 CCDC24Q8N4L8 307 aa14.19□□□□□ -0.14
CCDC144A-211ENST00000463809 ZNF598Q86UK7 904 aaKnown RBP14.18□□□□□ -0.14
CCDC144A-211ENST00000463809 CCNYL3P0C7X3 344 aa14.16□□□□□ -0.14
CCDC144A-211ENST00000463809 LYPD8Q6UX82 237 aa14.16□□□□□ -0.14
CCDC144A-211ENST00000463809 ZBTB24O43167 697 aaPredicted RBP14.15□□□□□ -0.14
CCDC144A-211ENST00000463809 PPP2R2DQ66LE6 453 aa14.15□□□□□ -0.14
CCDC144A-211ENST00000463809 ZNF697Q5TEC3 545 aa14.14□□□□□ -0.15
CCDC144A-211ENST00000463809 PTCRAQ6ISU1 281 aaPredicted RBP14.14□□□□□ -0.15
CCDC144A-211ENST00000463809 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
CCDC144A-211ENST00000463809 EVA1BQ9NVM1 165 aa14.14□□□□□ -0.15
CCDC144A-211ENST00000463809 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
CCDC144A-211ENST00000463809 ATP1B4Q9UN42 357 aaPredicted RBP14.13□□□□□ -0.15
CCDC144A-211ENST00000463809 PER1O15534 1290 aaPredicted RBP14.12□□□□□ -0.15
CCDC144A-211ENST00000463809 TRIM32Q13049 653 aa14.12□□□□□ -0.15
CCDC144A-211ENST00000463809 TSC1Q92574 1164 aa14.12□□□□□ -0.15
CCDC144A-211ENST00000463809 PCMTD1Q96MG8 357 aaPredicted RBP14.12□□□□□ -0.15
CCDC144A-211ENST00000463809 TRIM67Q6ZTA4 783 aa14.11□□□□□ -0.15
CCDC144A-211ENST00000463809 KCNH2Q12809 1159 aa14.1□□□□□ -0.15
CCDC144A-211ENST00000463809 HELBQ8NG08 1087 aaPredicted RBP14.1□□□□□ -0.15
CCDC144A-211ENST00000463809 GDF9O60383 454 aa14.07□□□□□ -0.16
CCDC144A-211ENST00000463809 F12P00748 615 aaPredicted RBP14.07□□□□□ -0.16
CCDC144A-211ENST00000463809 CTDSPL2Q05D32 466 aa14.06□□□□□ -0.16
CCDC144A-211ENST00000463809 UNC93B1Q9H1C4 597 aa14.06□□□□□ -0.16
CCDC144A-211ENST00000463809 PKD2L1Q9P0L9 805 aa14.06□□□□□ -0.16
CCDC144A-211ENST00000463809 PDZRN3Q9UPQ7 1066 aa14.06□□□□□ -0.16
CCDC144A-211ENST00000463809 GFRA3O60609 400 aa14.05□□□□□ -0.16
CCDC144A-211ENST00000463809 MAP10Q9P2G4 905 aa14.05□□□□□ -0.16
CCDC144A-211ENST00000463809 CTHP32929 405 aa14.04□□□□□ -0.16
CCDC144A-211ENST00000463809 RFC5P40937 340 aa14.04□□□□□ -0.16
CCDC144A-211ENST00000463809 PRR20EP86478 221 aa14.04□□□□□ -0.16
CCDC144A-211ENST00000463809 PRR20CP86479 221 aa14.04□□□□□ -0.16
CCDC144A-211ENST00000463809 PRR20DP86480 221 aa14.04□□□□□ -0.16
CCDC144A-211ENST00000463809 PRR20BP86481 221 aa14.04□□□□□ -0.16
CCDC144A-211ENST00000463809 PRR20AP86496 221 aa14.04□□□□□ -0.16
CCDC144A-211ENST00000463809 SKOR1P84550 965 aa14.03□□□□□ -0.16
CCDC144A-211ENST00000463809 FOXC1Q12948 553 aa14.02□□□□□ -0.17
CCDC144A-211ENST00000463809 TNFRSF10AO00220 468 aa14.01□□□□□ -0.17
CCDC144A-211ENST00000463809 WNT7BP56706 349 aa14.01□□□□□ -0.17
CCDC144A-211ENST00000463809 LAPTM4AQ15012 233 aa14.01□□□□□ -0.17
CCDC144A-211ENST00000463809 NRG2O14511 850 aaPredicted RBP14□□□□□ -0.17
CCDC144A-211ENST00000463809 AP1G2O75843 785 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms