RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 PRR20BP86481 221 aa10.14□□□□□ -0.79
TM9SF2-202ENST00000463709 PRR20AP86496 221 aa10.14□□□□□ -0.79
TM9SF2-202ENST00000463709 SPIRE2Q8WWL2 714 aa10.14□□□□□ -0.79
TM9SF2-202ENST00000463709 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
TM9SF2-202ENST00000463709 ZNF787Q6DD87 383 aa10.13□□□□□ -0.79
TM9SF2-202ENST00000463709 SPSB2Q99619 263 aa10.13□□□□□ -0.79
TM9SF2-202ENST00000463709 ATP1B4Q9UN42 357 aaPredicted RBP10.13□□□□□ -0.79
TM9SF2-202ENST00000463709 PLA2G2CQ5R387 149 aa10.12□□□□□ -0.79
TM9SF2-202ENST00000463709 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
TM9SF2-202ENST00000463709 HLA-CQ95604 372 aa10.12□□□□□ -0.79
TM9SF2-202ENST00000463709 NDUFV2P19404 249 aa10.11□□□□□ -0.79
TM9SF2-202ENST00000463709 GCGRP47871 477 aa10.11□□□□□ -0.79
TM9SF2-202ENST00000463709 PKDCCQ504Y2 493 aa10.11□□□□□ -0.79
TM9SF2-202ENST00000463709 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
TM9SF2-202ENST00000463709 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
TM9SF2-202ENST00000463709 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 GDF9O60383 454 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 KDM4AO75164 1064 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 DGAT1O75907 488 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 GUCA2AQ02747 115 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 FUT2Q10981 343 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 MORN1Q5T089 497 aa10.09□□□□□ -0.79
TM9SF2-202ENST00000463709 MYT1Q01538 1121 aa10.08□□□□□ -0.8
TM9SF2-202ENST00000463709 LIMD1Q9UGP4 676 aa10.08□□□□□ -0.8
TM9SF2-202ENST00000463709 TNFRSF10AO00220 468 aa10.07□□□□□ -0.8
TM9SF2-202ENST00000463709 ATP6V1AP38606 617 aa10.07□□□□□ -0.8
TM9SF2-202ENST00000463709 SH3D19Q5HYK7 790 aa10.07□□□□□ -0.8
TM9SF2-202ENST00000463709 GTF3C3Q9Y5Q9 886 aa10.07□□□□□ -0.8
TM9SF2-202ENST00000463709 THAP11Q96EK4 314 aa10.06□□□□□ -0.8
TM9SF2-202ENST00000463709 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
TM9SF2-202ENST00000463709 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
TM9SF2-202ENST00000463709 RIC3Q7Z5B4 369 aa10.05□□□□□ -0.8
TM9SF2-202ENST00000463709 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
TM9SF2-202ENST00000463709 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
TM9SF2-202ENST00000463709 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
TM9SF2-202ENST00000463709 HOXA2O43364 376 aa10.04□□□□□ -0.8
TM9SF2-202ENST00000463709 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
TM9SF2-202ENST00000463709 FBXO31Q5XUX0 539 aaPredicted RBP10.04□□□□□ -0.8
TM9SF2-202ENST00000463709 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
TM9SF2-202ENST00000463709 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
TM9SF2-202ENST00000463709 RSBN1LQ6PCB5 846 aaPredicted RBP10.03□□□□□ -0.8
TM9SF2-202ENST00000463709 RPIAP49247 311 aa10.02□□□□□ -0.81
TM9SF2-202ENST00000463709 FAM160A2Q8N612 972 aaPredicted RBP10.02□□□□□ -0.81
TM9SF2-202ENST00000463709 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.81
TM9SF2-202ENST00000463709 FCF1Q9Y324 198 aaKnown RBP10.02□□□□□ -0.81
TM9SF2-202ENST00000463709 SALL2Q9Y467 1007 aaPredicted RBP10.02□□□□□ -0.81
TM9SF2-202ENST00000463709 CABLES1Q8TDN4 633 aa10.01□□□□□ -0.81
TM9SF2-202ENST00000463709 ZNF775Q96BV0 537 aaPredicted RBP10.01□□□□□ -0.81
TM9SF2-202ENST00000463709 PCDHGC3Q9UN70 934 aa10.01□□□□□ -0.81
TM9SF2-202ENST00000463709 SPTLC1O15269 473 aa10□□□□□ -0.81
TM9SF2-202ENST00000463709 FDX1P10109 184 aa10□□□□□ -0.81
TM9SF2-202ENST00000463709 FOXC1Q12948 553 aa9.99□□□□□ -0.81
TM9SF2-202ENST00000463709 DIXDC1Q155Q3 683 aa9.99□□□□□ -0.81
TM9SF2-202ENST00000463709 QPCTQ16769 361 aa9.99□□□□□ -0.81
TM9SF2-202ENST00000463709 BRICD5Q6PL45 260 aa9.99□□□□□ -0.81
TM9SF2-202ENST00000463709 SYMPKQ92797 1274 aaKnown RBP9.99□□□□□ -0.81
TM9SF2-202ENST00000463709 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
TM9SF2-202ENST00000463709 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
TM9SF2-202ENST00000463709 USP46P62068 366 aa9.98□□□□□ -0.81
TM9SF2-202ENST00000463709 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
TM9SF2-202ENST00000463709 PRDM9Q9NQV7 894 aa9.98□□□□□ -0.81
TM9SF2-202ENST00000463709 MSS51Q4VC12 460 aa9.97□□□□□ -0.81
TM9SF2-202ENST00000463709 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
TM9SF2-202ENST00000463709 POTECB2RU33 542 aa9.96□□□□□ -0.82
TM9SF2-202ENST00000463709 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
TM9SF2-202ENST00000463709 RNF19BQ6ZMZ0 732 aa9.96□□□□□ -0.82
TM9SF2-202ENST00000463709 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
TM9SF2-202ENST00000463709 AAASQ9NRG9 546 aa9.95□□□□□ -0.82
TM9SF2-202ENST00000463709 NUTM2BA6NNL0 878 aaPredicted RBP9.94□□□□□ -0.82
TM9SF2-202ENST00000463709 NUTM2EB1AL46 878 aaPredicted RBP9.94□□□□□ -0.82
TM9SF2-202ENST00000463709 NUTM2DQ5VT03 806 aaPredicted RBP9.94□□□□□ -0.82
TM9SF2-202ENST00000463709 NUTM2AQ8IVF1 878 aaPredicted RBP9.94□□□□□ -0.82
TM9SF2-202ENST00000463709 TOR4AQ9NXH8 423 aa9.94□□□□□ -0.82
TM9SF2-202ENST00000463709 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
TM9SF2-202ENST00000463709 HRCP23327 699 aa9.93□□□□□ -0.82
TM9SF2-202ENST00000463709 ZBTB24O43167 697 aaPredicted RBP9.92□□□□□ -0.82
TM9SF2-202ENST00000463709 LILRB3O75022 631 aa9.92□□□□□ -0.82
TM9SF2-202ENST00000463709 Q3C1V9 767 aa9.92□□□□□ -0.82
TM9SF2-202ENST00000463709 CRIPAKQ8N1N5 446 aa9.92□□□□□ -0.82
TM9SF2-202ENST00000463709 AVPP01185 164 aa9.91□□□□□ -0.82
TM9SF2-202ENST00000463709 RFC5P40937 340 aa9.91□□□□□ -0.82
TM9SF2-202ENST00000463709 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
TM9SF2-202ENST00000463709 TSC1Q92574 1164 aa9.9□□□□□ -0.82
TM9SF2-202ENST00000463709 MMP16P51512 607 aa9.89□□□□□ -0.83
TM9SF2-202ENST00000463709 ZBTB3Q9H5J0 574 aa9.89□□□□□ -0.83
TM9SF2-202ENST00000463709 CFAP99D6REC4 459 aa9.88□□□□□ -0.83
TM9SF2-202ENST00000463709 GJA5P36382 358 aa9.88□□□□□ -0.83
TM9SF2-202ENST00000463709 MTMR2Q13614 643 aa9.88□□□□□ -0.83
TM9SF2-202ENST00000463709 AP1G2O75843 785 aa9.87□□□□□ -0.83
TM9SF2-202ENST00000463709 TUSC1Q2TAM9 212 aa9.87□□□□□ -0.83
TM9SF2-202ENST00000463709 USB1Q9BQ65 265 aaKnown RBP9.87□□□□□ -0.83
TM9SF2-202ENST00000463709 WNT7AO00755 349 aa9.86□□□□□ -0.83
TM9SF2-202ENST00000463709 TRIM32Q13049 653 aa9.86□□□□□ -0.83
TM9SF2-202ENST00000463709 PPP2R2DQ66LE6 453 aa9.86□□□□□ -0.83
TM9SF2-202ENST00000463709 TIMELESSQ9UNS1 1208 aa9.86□□□□□ -0.83
TM9SF2-202ENST00000463709 TTC24A2A3L6 582 aaPredicted RBP9.85□□□□□ -0.83
TM9SF2-202ENST00000463709 AXIN1O15169 862 aa9.85□□□□□ -0.83
TM9SF2-202ENST00000463709 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
TM9SF2-202ENST00000463709 CTC1Q2NKJ3 1217 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms