RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 CCDC146Q8IYE0 955 aa10.74□□□□□ -0.69
PRPF4B-203ENST00000463634 PPP6R1Q9UPN7 881 aa10.74□□□□□ -0.69
PRPF4B-203ENST00000463634 RRP1P56182 461 aaKnown RBP10.73□□□□□ -0.69
PRPF4B-203ENST00000463634 PTPRMP28827 1452 aa10.73□□□□□ -0.69
PRPF4B-203ENST00000463634 SPATA31D1Q6ZQQ2 1576 aa10.73□□□□□ -0.69
PRPF4B-203ENST00000463634 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
PRPF4B-203ENST00000463634 YTHDC2Q9H6S0 1430 aaKnown RBP10.73□□□□□ -0.69
PRPF4B-203ENST00000463634 PRAM1Q96QH2 718 aa10.72□□□□□ -0.69
PRPF4B-203ENST00000463634 A2ML1A8K2U0 1454 aa10.72□□□□□ -0.69
PRPF4B-203ENST00000463634 MORC1Q86VD1 984 aa10.72□□□□□ -0.69
PRPF4B-203ENST00000463634 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
PRPF4B-203ENST00000463634 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
PRPF4B-203ENST00000463634 SRPK2P78362 688 aaKnown RBP10.71□□□□□ -0.69
PRPF4B-203ENST00000463634 ANKRD36BQ8N2N9 1353 aa10.71□□□□□ -0.7
PRPF4B-203ENST00000463634 POGKQ9P215 609 aa10.71□□□□□ -0.7
PRPF4B-203ENST00000463634 USP32Q8NFA0 1604 aa10.7□□□□□ -0.7
PRPF4B-203ENST00000463634 CGNL1Q0VF96 1302 aa10.7□□□□□ -0.7
PRPF4B-203ENST00000463634 CCDC136Q96JN2 1154 aa10.7□□□□□ -0.7
PRPF4B-203ENST00000463634 PUS7Q96PZ0 661 aaKnown RBP10.7□□□□□ -0.7
PRPF4B-203ENST00000463634 ZNF521Q96K83 1311 aa10.7□□□□□ -0.7
PRPF4B-203ENST00000463634 RIMS2Q9UQ26 1411 aa10.69□□□□□ -0.7
PRPF4B-203ENST00000463634 ZMYM3Q14202 1370 aa10.69□□□□□ -0.7
PRPF4B-203ENST00000463634 APAF1O14727 1248 aa10.69□□□□□ -0.7
PRPF4B-203ENST00000463634 ESF1Q9H501 851 aaKnown RBP10.69□□□□□ -0.7
PRPF4B-203ENST00000463634 POLR3AO14802 1390 aaPredicted RBP10.69□□□□□ -0.7
PRPF4B-203ENST00000463634 PLIN1O60240 522 aa10.69□□□□□ -0.7
PRPF4B-203ENST00000463634 EXOC6Q8TAG9 804 aa10.69□□□□□ -0.7
PRPF4B-203ENST00000463634 A0A1W2PP64 1363 aa10.68□□□□□ -0.7
PRPF4B-203ENST00000463634 DUSP27Q5VZP5 1158 aa10.68□□□□□ -0.7
PRPF4B-203ENST00000463634 SHPRHQ149N8 1683 aa10.67□□□□□ -0.7
PRPF4B-203ENST00000463634 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
PRPF4B-203ENST00000463634 MTHFSP49914 203 aa10.67□□□□□ -0.7
PRPF4B-203ENST00000463634 SETD1AO15047 1707 aaKnown RBP10.66□□□□□ -0.7
PRPF4B-203ENST00000463634 WAPLQ7Z5K2 1190 aa10.66□□□□□ -0.7
PRPF4B-203ENST00000463634 SPINK5Q9NQ38 1064 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-203ENST00000463634 CD163L1Q9NR16 1453 aa10.65□□□□□ -0.7
PRPF4B-203ENST00000463634 ATAD2Q6PL18 1390 aa10.65□□□□□ -0.7
PRPF4B-203ENST00000463634 ABCC11Q96J66 1382 aa10.65□□□□□ -0.7
PRPF4B-203ENST00000463634 CDK19Q9BWU1 502 aa10.65□□□□□ -0.7
PRPF4B-203ENST00000463634 NRXN3Q9Y4C0 1643 aa10.65□□□□□ -0.7
PRPF4B-203ENST00000463634 NSD2O96028 1365 aa10.65□□□□□ -0.7
PRPF4B-203ENST00000463634 NINLQ9Y2I6 1382 aa10.65□□□□□ -0.7
PRPF4B-203ENST00000463634 SLFN5Q08AF3 891 aa10.65□□□□□ -0.71
PRPF4B-203ENST00000463634 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.71
PRPF4B-203ENST00000463634 GGNBP2Q9H3C7 697 aa10.64□□□□□ -0.71
PRPF4B-203ENST00000463634 METP08581 1390 aa10.63□□□□□ -0.71
PRPF4B-203ENST00000463634 TNRQ92752 1358 aa10.63□□□□□ -0.71
PRPF4B-203ENST00000463634 CABP1Q9NZU7 370 aa10.63□□□□□ -0.71
PRPF4B-203ENST00000463634 DLC1Q96QB1 1528 aa10.63□□□□□ -0.71
PRPF4B-203ENST00000463634 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
PRPF4B-203ENST00000463634 TERF2IPQ9NYB0 399 aa10.63□□□□□ -0.71
PRPF4B-203ENST00000463634 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
PRPF4B-203ENST00000463634 TRMT2AQ8IZ69 625 aaKnown RBP10.62□□□□□ -0.71
PRPF4B-203ENST00000463634 CFAP53Q96M91 514 aa10.62□□□□□ -0.71
PRPF4B-203ENST00000463634 RRP7AQ9Y3A4 280 aaKnown RBP10.62□□□□□ -0.71
PRPF4B-203ENST00000463634 FYB1O15117 783 aa10.62□□□□□ -0.71
PRPF4B-203ENST00000463634 CRBNQ96SW2 442 aa10.62□□□□□ -0.71
PRPF4B-203ENST00000463634 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.61□□□□□ -0.71
PRPF4B-203ENST00000463634 NLRP1Q9C000 1473 aa10.61□□□□□ -0.71
PRPF4B-203ENST00000463634 TXNDC2Q86VQ3 553 aa10.61□□□□□ -0.71
PRPF4B-203ENST00000463634 WWC1Q8IX03 1113 aa10.61□□□□□ -0.71
PRPF4B-203ENST00000463634 RUNDC1Q96C34 613 aa10.61□□□□□ -0.71
PRPF4B-203ENST00000463634 IQSEC2Q5JU85 1478 aa10.6□□□□□ -0.71
PRPF4B-203ENST00000463634 CEBPAP49715 358 aaPredicted RBP10.6□□□□□ -0.71
PRPF4B-203ENST00000463634 HDGFL2Q7Z4V5 671 aaPredicted RBP10.6□□□□□ -0.71
PRPF4B-203ENST00000463634 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
PRPF4B-203ENST00000463634 UBR1Q8IWV7 1749 aa10.6□□□□□ -0.71
PRPF4B-203ENST00000463634 NKTRP30414 1462 aaKnown RBP10.6□□□□□ -0.71
PRPF4B-203ENST00000463634 E9PSI1 815 aa10.6□□□□□ -0.71
PRPF4B-203ENST00000463634 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
PRPF4B-203ENST00000463634 U2AF1L5P0DN76 240 aaPredicted RBP10.59□□□□□ -0.71
PRPF4B-203ENST00000463634 U2AF1Q01081 240 aaKnown RBP eCLIP10.59□□□□□ -0.713e-14■■■■■ 28.3
PRPF4B-203ENST00000463634 ANKRD26Q9UPS8 1709 aa10.58□□□□□ -0.72
PRPF4B-203ENST00000463634 PLPPR3Q6T4P5 718 aa10.58□□□□□ -0.72
PRPF4B-203ENST00000463634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
PRPF4B-203ENST00000463634 NGEFQ8N5V2 710 aa10.58□□□□□ -0.72
PRPF4B-203ENST00000463634 MED14O60244 1454 aa10.58□□□□□ -0.72
PRPF4B-203ENST00000463634 WASLO00401 505 aaPredicted RBP10.57□□□□□ -0.72
PRPF4B-203ENST00000463634 BCAR3O75815 825 aa10.57□□□□□ -0.72
PRPF4B-203ENST00000463634 NCKAP5LQ9HCH0 1330 aa10.57□□□□□ -0.72
PRPF4B-203ENST00000463634 COL3A1P02461 1466 aaPredicted RBP10.57□□□□□ -0.72
PRPF4B-203ENST00000463634 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-203ENST00000463634 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-203ENST00000463634 KIF20BQ96Q89 1820 aa10.56□□□□□ -0.72
PRPF4B-203ENST00000463634 ATP7BP35670 1465 aa10.56□□□□□ -0.72
PRPF4B-203ENST00000463634 FBLN1P23142 703 aa10.56□□□□□ -0.72
PRPF4B-203ENST00000463634 LTKP29376 864 aa10.56□□□□□ -0.72
PRPF4B-203ENST00000463634 PPIP5K1Q6PFW1 1433 aa10.56□□□□□ -0.72
PRPF4B-203ENST00000463634 PHF23Q9BUL5 403 aaPredicted RBP10.56□□□□□ -0.72
PRPF4B-203ENST00000463634 ADAMTS13Q76LX8 1427 aa10.55□□□□□ -0.72
PRPF4B-203ENST00000463634 KNDC1Q76NI1 1749 aa10.55□□□□□ -0.72
PRPF4B-203ENST00000463634 TECPR2O15040 1411 aa10.55□□□□□ -0.72
PRPF4B-203ENST00000463634 CPS1P31327 1500 aa10.55□□□□□ -0.72
PRPF4B-203ENST00000463634 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.55□□□□□ -0.72
PRPF4B-203ENST00000463634 FAM135BQ49AJ0 1406 aa10.54□□□□□ -0.72
PRPF4B-203ENST00000463634 ROBO2Q9HCK4 1378 aa10.54□□□□□ -0.72
PRPF4B-203ENST00000463634 NUDT16Q96DE0 195 aaKnown RBP10.54□□□□□ -0.72
PRPF4B-203ENST00000463634 CPSF1Q10570 1443 aaKnown RBP10.54□□□□□ -0.72
PRPF4B-203ENST00000463634 FANCIQ9NVI1 1328 aa10.53□□□□□ -0.72
PRPF4B-203ENST00000463634 C3P01024 1663 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms