RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 FOXO3O43524 673 aa18.26■□□□□ 0.51
RPA3-206ENST00000463632 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
RPA3-206ENST00000463632 NPHP3Q7Z494 1330 aa18.25■□□□□ 0.51
RPA3-206ENST00000463632 USP21Q9UK80 565 aa18.25■□□□□ 0.51
RPA3-206ENST00000463632 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
RPA3-206ENST00000463632 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
RPA3-206ENST00000463632 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
RPA3-206ENST00000463632 NHSL1Q5SYE7 1610 aa18.21■□□□□ 0.51
RPA3-206ENST00000463632 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
RPA3-206ENST00000463632 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
RPA3-206ENST00000463632 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
RPA3-206ENST00000463632 TRPC5Q9UL62 973 aaPredicted RBP18.2■□□□□ 0.5
RPA3-206ENST00000463632 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
RPA3-206ENST00000463632 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
RPA3-206ENST00000463632 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
RPA3-206ENST00000463632 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
RPA3-206ENST00000463632 SPATA31E1Q6ZUB1 1445 aa18.17■□□□□ 0.5
RPA3-206ENST00000463632 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
RPA3-206ENST00000463632 RGS12O14924 1447 aa18.16■□□□□ 0.5
RPA3-206ENST00000463632 PRAG1Q86YV5 1406 aa18.16■□□□□ 0.5
RPA3-206ENST00000463632 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
RPA3-206ENST00000463632 LMOD2Q6P5Q4 547 aa18.16■□□□□ 0.5
RPA3-206ENST00000463632 POGKQ9P215 609 aa18.16■□□□□ 0.5
RPA3-206ENST00000463632 DHX57Q6P158 1386 aaKnown RBP18.15■□□□□ 0.5
RPA3-206ENST00000463632 KRT28Q7Z3Y7 464 aa18.14■□□□□ 0.49
RPA3-206ENST00000463632 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
RPA3-206ENST00000463632 C14orf93Q9H972 538 aaKnown RBP18.14■□□□□ 0.49
RPA3-206ENST00000463632 PPLO60437 1756 aa18.14■□□□□ 0.49
RPA3-206ENST00000463632 YTHDC2Q9H6S0 1430 aaKnown RBP18.14■□□□□ 0.49
RPA3-206ENST00000463632 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
RPA3-206ENST00000463632 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
RPA3-206ENST00000463632 PSME1Q06323 249 aa18.12■□□□□ 0.49
RPA3-206ENST00000463632 PIK3C2GO75747 1445 aa18.12■□□□□ 0.49
RPA3-206ENST00000463632 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
RPA3-206ENST00000463632 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
RPA3-206ENST00000463632 TECPR2O15040 1411 aa18.11■□□□□ 0.49
RPA3-206ENST00000463632 CDC42BPGQ6DT37 1551 aa18.11■□□□□ 0.49
RPA3-206ENST00000463632 RAB3GAP2Q9H2M9 1393 aa18.09■□□□□ 0.49
RPA3-206ENST00000463632 SPATA31A3Q5VYP0 1347 aa18.09■□□□□ 0.49
RPA3-206ENST00000463632 SIRT1Q96EB6 747 aa18.09■□□□□ 0.49
RPA3-206ENST00000463632 PXDNQ92626 1479 aa18.08■□□□□ 0.49
RPA3-206ENST00000463632 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
RPA3-206ENST00000463632 CCDC9Q9Y3X0 531 aaKnown RBP18.08■□□□□ 0.48
RPA3-206ENST00000463632 MYOM2P54296 1465 aa18.07■□□□□ 0.48
RPA3-206ENST00000463632 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
RPA3-206ENST00000463632 CABLES1Q8TDN4 633 aa18.07■□□□□ 0.48
RPA3-206ENST00000463632 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
RPA3-206ENST00000463632 ATRNO75882 1429 aa18.06■□□□□ 0.48
RPA3-206ENST00000463632 DCAF11Q8TEB1 546 aa18.06■□□□□ 0.48
RPA3-206ENST00000463632 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
RPA3-206ENST00000463632 UNC5CLQ8IV45 518 aa18.05■□□□□ 0.48
RPA3-206ENST00000463632 LAMC1P11047 1609 aa18.05■□□□□ 0.48
RPA3-206ENST00000463632 MINK1Q8N4C8 1332 aaPredicted RBP18.03■□□□□ 0.48
RPA3-206ENST00000463632 A0A0G2JS52 829 aa18.03■□□□□ 0.48
RPA3-206ENST00000463632 MYT1Q01538 1121 aa18.03■□□□□ 0.48
RPA3-206ENST00000463632 BCL9LQ86UU0 1499 aa18.01■□□□□ 0.47
RPA3-206ENST00000463632 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
RPA3-206ENST00000463632 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
RPA3-206ENST00000463632 COL22A1Q8NFW1 1626 aaPredicted RBP17.99■□□□□ 0.47
RPA3-206ENST00000463632 PAK3O75914 559 aaPredicted RBP17.99■□□□□ 0.47
RPA3-206ENST00000463632 NGDNQ8NEJ9 315 aaKnown RBP17.98■□□□□ 0.47
RPA3-206ENST00000463632 ARHGEF10O15013 1369 aa17.98■□□□□ 0.47
RPA3-206ENST00000463632 GPRASP1Q5JY77 1395 aa17.98■□□□□ 0.47
RPA3-206ENST00000463632 NRXN1Q9ULB1 1477 aa17.97■□□□□ 0.47
RPA3-206ENST00000463632 SF3B2Q13435 895 aaKnown RBP17.97■□□□□ 0.47
RPA3-206ENST00000463632 CCDC125Q86Z20 511 aa17.97■□□□□ 0.47
RPA3-206ENST00000463632 IFT172Q9UG01 1749 aa17.97■□□□□ 0.47
RPA3-206ENST00000463632 SBNO1A3KN83 1393 aa17.96■□□□□ 0.47
RPA3-206ENST00000463632 KNDC1Q76NI1 1749 aa17.96■□□□□ 0.47
RPA3-206ENST00000463632 SEPT12Q8IYM1 358 aa17.96■□□□□ 0.47
RPA3-206ENST00000463632 FMN2Q9NZ56 1722 aa17.95■□□□□ 0.46
RPA3-206ENST00000463632 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
RPA3-206ENST00000463632 EIF3AQ14152 1382 aaKnown RBP17.94■□□□□ 0.46
RPA3-206ENST00000463632 KIF1AQ12756 1690 aa17.94■□□□□ 0.46
RPA3-206ENST00000463632 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
RPA3-206ENST00000463632 VPS72Q15906 364 aa17.94■□□□□ 0.46
RPA3-206ENST00000463632 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
RPA3-206ENST00000463632 FAM83GA6ND36 823 aa17.93■□□□□ 0.46
RPA3-206ENST00000463632 STAC3Q96MF2 364 aa17.93■□□□□ 0.46
RPA3-206ENST00000463632 SLIT2O94813 1529 aa17.93■□□□□ 0.46
RPA3-206ENST00000463632 BTG4Q9NY30 223 aa17.91■□□□□ 0.46
RPA3-206ENST00000463632 DLC1Q96QB1 1528 aa17.9■□□□□ 0.46
RPA3-206ENST00000463632 KRT27Q7Z3Y8 459 aa17.9■□□□□ 0.46
RPA3-206ENST00000463632 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
RPA3-206ENST00000463632 FAM98CQ17RN3 349 aaKnown RBP17.89■□□□□ 0.45
RPA3-206ENST00000463632 DEFB132Q7Z7B7 95 aa17.89■□□□□ 0.45
RPA3-206ENST00000463632 HRCP23327 699 aa17.88■□□□□ 0.45
RPA3-206ENST00000463632 NUDT16Q96DE0 195 aaKnown RBP17.88■□□□□ 0.45
RPA3-206ENST00000463632 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
RPA3-206ENST00000463632 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
RPA3-206ENST00000463632 NUTM2GQ5VZR2 741 aa17.87■□□□□ 0.45
RPA3-206ENST00000463632 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
RPA3-206ENST00000463632 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
RPA3-206ENST00000463632 ADGRB1O14514 1584 aa17.86■□□□□ 0.45
RPA3-206ENST00000463632 GLI3P10071 1580 aa17.84■□□□□ 0.45
RPA3-206ENST00000463632 TULP4Q9NRJ4 1543 aa17.83■□□□□ 0.45
RPA3-206ENST00000463632 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
RPA3-206ENST00000463632 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
RPA3-206ENST00000463632 MARF1Q9Y4F3 1742 aaKnown RBP17.82■□□□□ 0.44
RPA3-206ENST00000463632 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms