RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 ATAD2Q6PL18 1390 aa10.19□□□□□ -0.78
EPHA4-210ENST00000463446 WASHC2AQ641Q2 1341 aa10.19□□□□□ -0.78
EPHA4-210ENST00000463446 WASLO00401 505 aaPredicted RBP10.19□□□□□ -0.78
EPHA4-210ENST00000463446 WAPLQ7Z5K2 1190 aa10.19□□□□□ -0.78
EPHA4-210ENST00000463446 TERF2IPQ9NYB0 399 aa10.19□□□□□ -0.78
EPHA4-210ENST00000463446 CCDC61Q9Y6R9 512 aa10.19□□□□□ -0.78
EPHA4-210ENST00000463446 POLR1AO95602 1720 aaPredicted RBP10.19□□□□□ -0.78
EPHA4-210ENST00000463446 CDK19Q9BWU1 502 aa10.18□□□□□ -0.78
EPHA4-210ENST00000463446 HDGFL2Q7Z4V5 671 aaPredicted RBP10.17□□□□□ -0.78
EPHA4-210ENST00000463446 NKTRP30414 1462 aaKnown RBP10.17□□□□□ -0.78
EPHA4-210ENST00000463446 SAFB2Q14151 953 aaKnown RBP eCLIP10.16□□□□□ -0.78
EPHA4-210ENST00000463446 MSH6P52701 1360 aa10.15□□□□□ -0.78
EPHA4-210ENST00000463446 MINK1Q8N4C8 1332 aaPredicted RBP10.15□□□□□ -0.78
EPHA4-210ENST00000463446 POLR3GLQ9BT43 218 aa10.15□□□□□ -0.78
EPHA4-210ENST00000463446 HIRIP3Q9BW71 556 aaPredicted RBP10.15□□□□□ -0.78
EPHA4-210ENST00000463446 ROBO2Q9HCK4 1378 aa10.14□□□□□ -0.79
EPHA4-210ENST00000463446 CPS1P31327 1500 aa10.14□□□□□ -0.79
EPHA4-210ENST00000463446 TMC1Q8TDI8 760 aa10.14□□□□□ -0.79
EPHA4-210ENST00000463446 NUDT16Q96DE0 195 aaKnown RBP10.14□□□□□ -0.79
EPHA4-210ENST00000463446 KNSTRNQ9Y448 316 aa10.14□□□□□ -0.79
EPHA4-210ENST00000463446 NRXN3Q9Y4C0 1643 aa10.14□□□□□ -0.79
EPHA4-210ENST00000463446 CHD2O14647 1828 aaKnown RBP10.14□□□□□ -0.79
EPHA4-210ENST00000463446 CCDC7Q96M83 1385 aa10.14□□□□□ -0.79
EPHA4-210ENST00000463446 KIF7Q2M1P5 1343 aa10.13□□□□□ -0.79
EPHA4-210ENST00000463446 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
EPHA4-210ENST00000463446 PSME1Q06323 249 aa10.13□□□□□ -0.79
EPHA4-210ENST00000463446 BRD4O60885 1362 aaPredicted RBP10.13□□□□□ -0.79
EPHA4-210ENST00000463446 TOM1O60784 492 aa10.12□□□□□ -0.79
EPHA4-210ENST00000463446 DDX10Q13206 875 aaKnown RBP10.12□□□□□ -0.79
EPHA4-210ENST00000463446 DCCP43146 1447 aa10.12□□□□□ -0.79
EPHA4-210ENST00000463446 PTPRUQ92729 1446 aa10.12□□□□□ -0.79
EPHA4-210ENST00000463446 KNDC1Q76NI1 1749 aa10.12□□□□□ -0.79
EPHA4-210ENST00000463446 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
EPHA4-210ENST00000463446 ANP32CO43423 234 aa10.11□□□□□ -0.79
EPHA4-210ENST00000463446 DIEXFQ68CQ4 756 aaKnown RBP10.11□□□□□ -0.79
EPHA4-210ENST00000463446 NGDNQ8NEJ9 315 aaKnown RBP10.11□□□□□ -0.79
EPHA4-210ENST00000463446 CABP2Q9NPB3 220 aa10.11□□□□□ -0.79
EPHA4-210ENST00000463446 KTN1Q86UP2 1357 aaKnown RBP10.11□□□□□ -0.79
EPHA4-210ENST00000463446 ANKARQ7Z5J8 1434 aa10.1□□□□□ -0.79
EPHA4-210ENST00000463446 CABP1Q9NZU7 370 aa10.1□□□□□ -0.79
EPHA4-210ENST00000463446 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
EPHA4-210ENST00000463446 TMEM94Q12767 1356 aa10.1□□□□□ -0.79
EPHA4-210ENST00000463446 SETD1AO15047 1707 aaKnown RBP10.1□□□□□ -0.79
EPHA4-210ENST00000463446 ZNF335Q9H4Z2 1342 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-210ENST00000463446 ADGRL3Q9HAR2 1447 aa10.09□□□□□ -0.79
EPHA4-210ENST00000463446 C11orf95C9JLR9 678 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-210ENST00000463446 PANK3Q9H999 370 aa10.09□□□□□ -0.79
EPHA4-210ENST00000463446 NWD1Q149M9 1564 aa10.09□□□□□ -0.79
EPHA4-210ENST00000463446 CGNL1Q0VF96 1302 aa10.08□□□□□ -0.8
EPHA4-210ENST00000463446 RALBP1Q15311 655 aa10.08□□□□□ -0.8
EPHA4-210ENST00000463446 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
EPHA4-210ENST00000463446 SLC12A5Q9H2X9 1139 aa10.08□□□□□ -0.8
EPHA4-210ENST00000463446 PHF8Q9UPP1 1060 aa10.08□□□□□ -0.8
EPHA4-210ENST00000463446 ASXL1Q8IXJ9 1541 aa10.07□□□□□ -0.8
EPHA4-210ENST00000463446 XRN1Q8IZH2 1706 aaKnown RBP10.07□□□□□ -0.8
EPHA4-210ENST00000463446 ARHGEF28Q8N1W1 1705 aaKnown RBP10.07□□□□□ -0.8
EPHA4-210ENST00000463446 DISP3Q9P2K9 1392 aa10.07□□□□□ -0.8
EPHA4-210ENST00000463446 PLEKHH1Q9ULM0 1364 aa10.07□□□□□ -0.8
EPHA4-210ENST00000463446 FBXO41Q8TF61 875 aa10.07□□□□□ -0.8
EPHA4-210ENST00000463446 QRICH2Q9H0J4 1663 aa10.06□□□□□ -0.8
EPHA4-210ENST00000463446 ANKRD36BQ8N2N9 1353 aa10.06□□□□□ -0.8
EPHA4-210ENST00000463446 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
EPHA4-210ENST00000463446 TTC21AQ8NDW8 1320 aa10.06□□□□□ -0.8
EPHA4-210ENST00000463446 NPC1L1Q9UHC9 1359 aa10.05□□□□□ -0.8
EPHA4-210ENST00000463446 ADGRB2O60241 1585 aa10.05□□□□□ -0.8
EPHA4-210ENST00000463446 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
EPHA4-210ENST00000463446 NSD2O96028 1365 aa10.04□□□□□ -0.8
EPHA4-210ENST00000463446 LRRC7Q96NW7 1537 aa10.04□□□□□ -0.8
EPHA4-210ENST00000463446 TULP4Q9NRJ4 1543 aa10.04□□□□□ -0.8
EPHA4-210ENST00000463446 PER1O15534 1290 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-210ENST00000463446 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
EPHA4-210ENST00000463446 ACEP12821 1306 aa10.04□□□□□ -0.8
EPHA4-210ENST00000463446 CACNB1Q02641 598 aaPredicted RBP10.03□□□□□ -0.8
EPHA4-210ENST00000463446 CERKQ8TCT0 537 aa10.03□□□□□ -0.8
EPHA4-210ENST00000463446 ATP7BP35670 1465 aa10.03□□□□□ -0.8
EPHA4-210ENST00000463446 CDC42BPGQ6DT37 1551 aa10.02□□□□□ -0.81
EPHA4-210ENST00000463446 NLRP13Q86W25 1043 aa10.02□□□□□ -0.81
EPHA4-210ENST00000463446 COG3Q96JB2 828 aa10.02□□□□□ -0.81
EPHA4-210ENST00000463446 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
EPHA4-210ENST00000463446 NUTM2FA1L443 756 aa10.01□□□□□ -0.81
EPHA4-210ENST00000463446 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
EPHA4-210ENST00000463446 MORC1Q86VD1 984 aa10.01□□□□□ -0.81
EPHA4-210ENST00000463446 KCNH5Q8NCM2 988 aa10.01□□□□□ -0.81
EPHA4-210ENST00000463446 PMFBP1Q8TBY8 1022 aa10.01□□□□□ -0.81
EPHA4-210ENST00000463446 LRRC59Q96AG4 307 aaKnown RBP10.01□□□□□ -0.81
EPHA4-210ENST00000463446 RBM33Q96EV2 1170 aaKnown RBP10.01□□□□□ -0.81
EPHA4-210ENST00000463446 CPSF1Q10570 1443 aaKnown RBP10□□□□□ -0.81
EPHA4-210ENST00000463446 EDC4Q6P2E9 1401 aaKnown RBP10□□□□□ -0.81
EPHA4-210ENST00000463446 C1orf167Q5SNV9 1468 aa10□□□□□ -0.81
EPHA4-210ENST00000463446 SIPA1L2Q9P2F8 1722 aaPredicted RBP10□□□□□ -0.81
EPHA4-210ENST00000463446 FOXO3O43524 673 aa10□□□□□ -0.81
EPHA4-210ENST00000463446 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
EPHA4-210ENST00000463446 ILDR2Q71H61 639 aa10□□□□□ -0.81
EPHA4-210ENST00000463446 ABTB2Q8N961 1025 aa10□□□□□ -0.81
EPHA4-210ENST00000463446 CCER2I3L3R5 266 aa9.99□□□□□ -0.81
EPHA4-210ENST00000463446 CFAP53Q96M91 514 aa9.99□□□□□ -0.81
EPHA4-210ENST00000463446 PRR36Q9H6K5 1346 aa9.99□□□□□ -0.81
EPHA4-210ENST00000463446 UBAP1LF5GYI3 381 aa9.98□□□□□ -0.81
EPHA4-210ENST00000463446 FYB1O15117 783 aa9.98□□□□□ -0.81
EPHA4-210ENST00000463446 ORAI2Q96SN7 254 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms