RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 SALL2Q9Y467 1007 aaPredicted RBP8.05□□□□□ -1.12
NDUFA4-202ENST00000463308 MORN1Q5T089 497 aa8.03□□□□□ -1.12
NDUFA4-202ENST00000463308 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
NDUFA4-202ENST00000463308 KRTAP4-8Q9BYQ9 185 aa8.02□□□□□ -1.13
NDUFA4-202ENST00000463308 TRIM46Q7Z4K8 759 aa8.01□□□□□ -1.13
NDUFA4-202ENST00000463308 BMP1P13497 986 aa8□□□□□ -1.13
NDUFA4-202ENST00000463308 PRDM9Q9NQV7 894 aa8□□□□□ -1.13
NDUFA4-202ENST00000463308 PTGDRQ13258 359 aa7.99□□□□□ -1.13
NDUFA4-202ENST00000463308 CAPN5O15484 640 aaPredicted RBP7.98□□□□□ -1.13
NDUFA4-202ENST00000463308 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
NDUFA4-202ENST00000463308 FOXK2Q01167 660 aa7.98□□□□□ -1.13
NDUFA4-202ENST00000463308 DNMT3AQ9Y6K1 912 aaPredicted RBP7.98□□□□□ -1.13
NDUFA4-202ENST00000463308 WNT7BP56706 349 aa7.97□□□□□ -1.13
NDUFA4-202ENST00000463308 RC3H1Q5TC82 1133 aaKnown RBP7.97□□□□□ -1.13
NDUFA4-202ENST00000463308 GPAT2Q6NUI2 795 aa7.97□□□□□ -1.13
NDUFA4-202ENST00000463308 ALDH1A1P00352 501 aa7.96□□□□□ -1.14
NDUFA4-202ENST00000463308 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
NDUFA4-202ENST00000463308 SLC27A5Q9Y2P5 690 aa7.96□□□□□ -1.14
NDUFA4-202ENST00000463308 FECHP22830 423 aa7.95□□□□□ -1.14
NDUFA4-202ENST00000463308 FUT2Q10981 343 aa7.95□□□□□ -1.14
NDUFA4-202ENST00000463308 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
NDUFA4-202ENST00000463308 OATP04181 439 aa7.93□□□□□ -1.14
NDUFA4-202ENST00000463308 MMP16P51512 607 aa7.93□□□□□ -1.14
NDUFA4-202ENST00000463308 ADAMTS8Q9UP79 889 aa7.92□□□□□ -1.14
NDUFA4-202ENST00000463308 FAM161AQ3B820 660 aa7.91□□□□□ -1.14
NDUFA4-202ENST00000463308 WASF2Q9Y6W5 498 aa7.91□□□□□ -1.14
NDUFA4-202ENST00000463308 PXYLP1Q8TE99 480 aa7.9□□□□□ -1.14
NDUFA4-202ENST00000463308 WDR70Q9NW82 654 aa7.9□□□□□ -1.14
NDUFA4-202ENST00000463308 SKOR1P84550 965 aa7.89□□□□□ -1.15
NDUFA4-202ENST00000463308 RDH13Q8NBN7 331 aa7.89□□□□□ -1.15
NDUFA4-202ENST00000463308 GRIPAP1Q4V328 841 aa7.88□□□□□ -1.15
NDUFA4-202ENST00000463308 KANK3Q6NY19 840 aa7.88□□□□□ -1.15
NDUFA4-202ENST00000463308 SCARF1Q14162 830 aa7.87□□□□□ -1.15
NDUFA4-202ENST00000463308 Q3C1V9 767 aa7.87□□□□□ -1.15
NDUFA4-202ENST00000463308 RNF19BQ6ZMZ0 732 aa7.87□□□□□ -1.15
NDUFA4-202ENST00000463308 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
NDUFA4-202ENST00000463308 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.86□□□□□ -1.15
NDUFA4-202ENST00000463308 SIAH2O43255 324 aa7.86□□□□□ -1.15
NDUFA4-202ENST00000463308 ADAM23O75077 832 aa7.85□□□□□ -1.15
NDUFA4-202ENST00000463308 DXOO77932 396 aaKnown RBP7.85□□□□□ -1.15
NDUFA4-202ENST00000463308 MRPL14Q6P1L8 145 aaKnown RBP7.85□□□□□ -1.15
NDUFA4-202ENST00000463308 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
NDUFA4-202ENST00000463308 DAXXQ9UER7 740 aaPredicted RBP7.85□□□□□ -1.15
NDUFA4-202ENST00000463308 GCGRP47871 477 aa7.84□□□□□ -1.15
NDUFA4-202ENST00000463308 IRS1P35568 1242 aa7.83□□□□□ -1.16
NDUFA4-202ENST00000463308 EHBP1Q8NDI1 1231 aa7.83□□□□□ -1.16
NDUFA4-202ENST00000463308 METTL3Q86U44 580 aaKnown RBP7.82□□□□□ -1.16
NDUFA4-202ENST00000463308 CCDC24Q8N4L8 307 aa7.82□□□□□ -1.16
NDUFA4-202ENST00000463308 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
NDUFA4-202ENST00000463308 PPFIA3O75145 1194 aa7.81□□□□□ -1.16
NDUFA4-202ENST00000463308 FCHSD2O94868 740 aa7.81□□□□□ -1.16
NDUFA4-202ENST00000463308 SULF1Q8IWU6 871 aa7.81□□□□□ -1.16
NDUFA4-202ENST00000463308 DDX11L8A8MPP1 907 aa7.8□□□□□ -1.16
NDUFA4-202ENST00000463308 DCAF8L2P0C7V8 631 aa7.8□□□□□ -1.16
NDUFA4-202ENST00000463308 PURBQ96QR8 312 aaKnown RBP7.8□□□□□ -1.16
NDUFA4-202ENST00000463308 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
NDUFA4-202ENST00000463308 NUTM2FA1L443 756 aa7.79□□□□□ -1.16
NDUFA4-202ENST00000463308 SVOPQ8N4V2 548 aa7.79□□□□□ -1.16
NDUFA4-202ENST00000463308 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
NDUFA4-202ENST00000463308 SCARF2Q96GP6 870 aaPredicted RBP7.78□□□□□ -1.16
NDUFA4-202ENST00000463308 MSTNO14793 375 aa7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 MAN1A2O60476 641 aa7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 MLLT3P42568 568 aaPredicted RBP7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 KRT76Q01546 638 aa7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 ZNF385CQ66K41 422 aaPredicted RBP7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 KRTAP1-3Q8IUG1 177 aa7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 CNTNAP3BQ96NU0 1288 aa7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 CNTNAP3Q9BZ76 1288 aa7.77□□□□□ -1.17
NDUFA4-202ENST00000463308 MARSP56192 900 aaKnown RBP7.76□□□□□ -1.17
NDUFA4-202ENST00000463308 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
NDUFA4-202ENST00000463308 ADH1CP00326 375 aa7.73□□□□□ -1.17
NDUFA4-202ENST00000463308 ARHGEF15O94989 841 aa7.72□□□□□ -1.17
NDUFA4-202ENST00000463308 TIMP2P16035 220 aa7.72□□□□□ -1.17
NDUFA4-202ENST00000463308 NNTQ13423 1086 aa7.72□□□□□ -1.17
NDUFA4-202ENST00000463308 MPNDQ8N594 471 aa7.72□□□□□ -1.17
NDUFA4-202ENST00000463308 Q8N3U1 123 aa7.71□□□□□ -1.18
NDUFA4-202ENST00000463308 SLURP2P0DP57 97 aa7.7□□□□□ -1.18
NDUFA4-202ENST00000463308 WDR4P57081 412 aaKnown RBP7.7□□□□□ -1.18
NDUFA4-202ENST00000463308 HIC1Q14526 733 aa7.7□□□□□ -1.18
NDUFA4-202ENST00000463308 SPOCK3Q9BQ16 436 aa7.7□□□□□ -1.18
NDUFA4-202ENST00000463308 PLA2G4EQ3MJ16 856 aa7.69□□□□□ -1.18
NDUFA4-202ENST00000463308 GPR161Q8N6U8 529 aaKnown RBP7.69□□□□□ -1.18
NDUFA4-202ENST00000463308 COL25A1Q9BXS0 654 aaPredicted RBP7.69□□□□□ -1.18
NDUFA4-202ENST00000463308 JUNDP17535 347 aa7.68□□□□□ -1.18
NDUFA4-202ENST00000463308 SH3BP2P78314 561 aa7.68□□□□□ -1.18
NDUFA4-202ENST00000463308 ARHGEF1Q92888 912 aaKnown RBP7.68□□□□□ -1.18
NDUFA4-202ENST00000463308 BBXQ8WY36 941 aaPredicted RBP7.67□□□□□ -1.18
NDUFA4-202ENST00000463308 NANOS1Q8WY41 292 aaKnown RBP7.67□□□□□ -1.18
NDUFA4-202ENST00000463308 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
NDUFA4-202ENST00000463308 K7ELQ4 463 aaPredicted RBP7.66□□□□□ -1.18
NDUFA4-202ENST00000463308 NUDT12Q9BQG2 462 aa7.66□□□□□ -1.18
NDUFA4-202ENST00000463308 UPP2O95045 317 aa7.65□□□□□ -1.18
NDUFA4-202ENST00000463308 VARSP26640 1264 aaKnown RBP7.65□□□□□ -1.18
NDUFA4-202ENST00000463308 GALNT6Q8NCL4 622 aa7.65□□□□□ -1.18
NDUFA4-202ENST00000463308 KLF16Q9BXK1 252 aaPredicted RBP7.65□□□□□ -1.18
NDUFA4-202ENST00000463308 C6orf118Q5T5N4 469 aa7.64□□□□□ -1.19
NDUFA4-202ENST00000463308 PTCRAQ6ISU1 281 aaPredicted RBP7.64□□□□□ -1.19
NDUFA4-202ENST00000463308 WHAMMQ8TF30 809 aa7.64□□□□□ -1.19
NDUFA4-202ENST00000463308 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
NDUFA4-202ENST00000463308 SPRYD3Q8NCJ5 442 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms