RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 PRAG1Q86YV5 1406 aa30.79■■■□□ 2.52
PTPN18-208ENST00000462996 VGFO15240 615 aaPredicted RBP30.78■■■□□ 2.52
PTPN18-208ENST00000462996 CCDC125Q86Z20 511 aa30.78■■■□□ 2.52
PTPN18-208ENST00000462996 HFM1A2PYH4 1435 aa30.75■■■□□ 2.51
PTPN18-208ENST00000462996 MARF1Q9Y4F3 1742 aaKnown RBP30.75■■■□□ 2.51
PTPN18-208ENST00000462996 ESCO1Q5FWF5 840 aa30.74■■■□□ 2.51
PTPN18-208ENST00000462996 GJD4Q96KN9 370 aaPredicted RBP30.74■■■□□ 2.51
PTPN18-208ENST00000462996 PXDNQ92626 1479 aa30.74■■■□□ 2.51
PTPN18-208ENST00000462996 NPHP3Q7Z494 1330 aa30.73■■■□□ 2.51
PTPN18-208ENST00000462996 XPCQ01831 940 aaPredicted RBP30.71■■■□□ 2.51
PTPN18-208ENST00000462996 FOXO3O43524 673 aa30.7■■■□□ 2.51
PTPN18-208ENST00000462996 CDC42BPGQ6DT37 1551 aa30.67■■■□□ 2.5
PTPN18-208ENST00000462996 RPGRIP1LQ68CZ1 1315 aa30.67■■■□□ 2.5
PTPN18-208ENST00000462996 PPARGC1BQ86YN6 1023 aaKnown RBP30.66■■■□□ 2.5
PTPN18-208ENST00000462996 PPLO60437 1756 aa30.64■■■□□ 2.5
PTPN18-208ENST00000462996 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.64■■■□□ 2.5
PTPN18-208ENST00000462996 GLI3P10071 1580 aa30.62■■■□□ 2.49
PTPN18-208ENST00000462996 RALGAPBQ86X10 1494 aa30.62■■■□□ 2.49
PTPN18-208ENST00000462996 NUTM2FA1L443 756 aa30.61■■■□□ 2.49
PTPN18-208ENST00000462996 UNC5CLQ8IV45 518 aa30.61■■■□□ 2.49
PTPN18-208ENST00000462996 BLMP54132 1417 aaPredicted RBP30.61■■■□□ 2.49
PTPN18-208ENST00000462996 NAIPQ13075 1403 aa30.6■■■□□ 2.49
PTPN18-208ENST00000462996 SLIT2O94813 1529 aa30.59■■■□□ 2.49
PTPN18-208ENST00000462996 BRWD3Q6RI45 1802 aa30.59■■■□□ 2.49
PTPN18-208ENST00000462996 LRPPRCP42704 1394 aaKnown RBP30.58■■■□□ 2.49
PTPN18-208ENST00000462996 DEFB132Q7Z7B7 95 aa30.58■■■□□ 2.49
PTPN18-208ENST00000462996 WAPLQ7Z5K2 1190 aa30.57■■■□□ 2.48
PTPN18-208ENST00000462996 SPATA31A3Q5VYP0 1347 aa30.55■■■□□ 2.48
PTPN18-208ENST00000462996 STK26Q9P289 416 aa30.54■■■□□ 2.48
PTPN18-208ENST00000462996 ADGRF5Q8IZF2 1346 aa30.52■■■□□ 2.48
PTPN18-208ENST00000462996 TECPR2O15040 1411 aa30.51■■■□□ 2.47
PTPN18-208ENST00000462996 SEPT12Q8IYM1 358 aa30.5■■■□□ 2.47
PTPN18-208ENST00000462996 PLEKHH1Q9ULM0 1364 aa30.5■■■□□ 2.47
PTPN18-208ENST00000462996 USP32Q8NFA0 1604 aa30.49■■■□□ 2.47
PTPN18-208ENST00000462996 SLC4A1APQ9BWU0 796 aaKnown RBP30.49■■■□□ 2.47
PTPN18-208ENST00000462996 KRT28Q7Z3Y7 464 aa30.47■■■□□ 2.47
PTPN18-208ENST00000462996 FMN2Q9NZ56 1722 aa30.47■■■□□ 2.47
PTPN18-208ENST00000462996 SF3B2Q13435 895 aaKnown RBP30.46■■■□□ 2.47
PTPN18-208ENST00000462996 ABCC11Q96J66 1382 aa30.45■■■□□ 2.47
PTPN18-208ENST00000462996 CCDC144AA2RUR9 1427 aa30.45■■■□□ 2.46
PTPN18-208ENST00000462996 RRBP1Q9P2E9 1410 aaKnown RBP30.45■■■□□ 2.46
PTPN18-208ENST00000462996 KIF1AQ12756 1690 aa30.44■■■□□ 2.46
PTPN18-208ENST00000462996 VPS72Q15906 364 aa30.44■■■□□ 2.46
PTPN18-208ENST00000462996 TMEM132EQ6IEE7 984 aa30.44■■■□□ 2.46
PTPN18-208ENST00000462996 ONECUT3O60422 494 aaPredicted RBP30.43■■■□□ 2.46
PTPN18-208ENST00000462996 CABLES1Q8TDN4 633 aa30.43■■■□□ 2.46
PTPN18-208ENST00000462996 LRP5O75197 1615 aa30.43■■■□□ 2.46
PTPN18-208ENST00000462996 KNDC1Q76NI1 1749 aa30.42■■■□□ 2.46
PTPN18-208ENST00000462996 RGL3Q3MIN7 710 aa30.4■■■□□ 2.46
PTPN18-208ENST00000462996 KRT27Q7Z3Y8 459 aa30.4■■■□□ 2.46
PTPN18-208ENST00000462996 RGPD8O14715 1765 aaPredicted RBP30.39■■■□□ 2.46
PTPN18-208ENST00000462996 PLCH1Q4KWH8 1693 aa30.39■■■□□ 2.45
PTPN18-208ENST00000462996 PLEKHG5O94827 1062 aa30.38■■■□□ 2.45
PTPN18-208ENST00000462996 HAP1P54257 671 aaPredicted RBP30.38■■■□□ 2.45
PTPN18-208ENST00000462996 TNS3Q68CZ2 1445 aa30.38■■■□□ 2.45
PTPN18-208ENST00000462996 NWD2Q9ULI1 1742 aa30.37■■■□□ 2.45
PTPN18-208ENST00000462996 CCDC9Q9Y3X0 531 aaKnown RBP30.37■■■□□ 2.45
PTPN18-208ENST00000462996 IFT172Q9UG01 1749 aa30.36■■■□□ 2.45
PTPN18-208ENST00000462996 SPATA31E1Q6ZUB1 1445 aa30.36■■■□□ 2.45
PTPN18-208ENST00000462996 PHF8Q9UPP1 1060 aa30.35■■■□□ 2.45
PTPN18-208ENST00000462996 YTHDC2Q9H6S0 1430 aaKnown RBP30.34■■■□□ 2.45
PTPN18-208ENST00000462996 ANKRD30BQ9BXX2 1392 aa30.34■■■□□ 2.45
PTPN18-208ENST00000462996 PSDA5PKW4 1024 aaPredicted RBP30.34■■■□□ 2.45
PTPN18-208ENST00000462996 PSME1Q06323 249 aa30.34■■■□□ 2.45
PTPN18-208ENST00000462996 PIK3C2GO75747 1445 aa30.32■■■□□ 2.44
PTPN18-208ENST00000462996 FAM83GA6ND36 823 aa30.32■■■□□ 2.44
PTPN18-208ENST00000462996 ABCA3Q99758 1704 aa30.32■■■□□ 2.44
PTPN18-208ENST00000462996 HRCP23327 699 aa30.31■■■□□ 2.44
PTPN18-208ENST00000462996 SBNO1A3KN83 1393 aa30.3■■■□□ 2.44
PTPN18-208ENST00000462996 SIRT1Q96EB6 747 aa30.3■■■□□ 2.44
PTPN18-208ENST00000462996 LMOD2Q6P5Q4 547 aa30.29■■■□□ 2.44
PTPN18-208ENST00000462996 BAG6P46379 1132 aa30.28■■■□□ 2.44
PTPN18-208ENST00000462996 NRXN1Q9ULB1 1477 aa30.27■■■□□ 2.44
PTPN18-208ENST00000462996 ARHGEF10O15013 1369 aa30.26■■■□□ 2.43
PTPN18-208ENST00000462996 A0A0G2JS52 829 aa30.25■■■□□ 2.43
PTPN18-208ENST00000462996 MYT1Q01538 1121 aa30.25■■■□□ 2.43
PTPN18-208ENST00000462996 FAM98CQ17RN3 349 aaKnown RBP30.25■■■□□ 2.43
PTPN18-208ENST00000462996 NRAPQ86VF7 1730 aa30.23■■■□□ 2.43
PTPN18-208ENST00000462996 EN1Q05925 392 aaPredicted RBP30.22■■■□□ 2.43
PTPN18-208ENST00000462996 C14orf93Q9H972 538 aaKnown RBP30.21■■■□□ 2.43
PTPN18-208ENST00000462996 PMFBP1Q8TBY8 1022 aa30.2■■■□□ 2.43
PTPN18-208ENST00000462996 BTG4Q9NY30 223 aa30.2■■■□□ 2.43
PTPN18-208ENST00000462996 SAFB2Q14151 953 aaKnown RBP eCLIP30.19■■■□□ 2.42
PTPN18-208ENST00000462996 FAM182BQ5T319 152 aa30.19■■■□□ 2.42
PTPN18-208ENST00000462996 PRAM1Q96QH2 718 aa30.17■■■□□ 2.42
PTPN18-208ENST00000462996 CFAP70Q5T0N1 1121 aa30.16■■■□□ 2.42
PTPN18-208ENST00000462996 MPHOSPH9Q99550 1183 aa30.16■■■□□ 2.42
PTPN18-208ENST00000462996 RGPD1P0DJD0 1748 aa30.16■■■□□ 2.42
PTPN18-208ENST00000462996 DHX57Q6P158 1386 aaKnown RBP30.15■■■□□ 2.42
PTPN18-208ENST00000462996 R3HDM1Q15032 1099 aaKnown RBP30.15■■■□□ 2.42
PTPN18-208ENST00000462996 TRPM3Q9HCF6 1732 aaPredicted RBP30.14■■■□□ 2.42
PTPN18-208ENST00000462996 COL14A1Q05707 1796 aaKnown RBP30.12■■■□□ 2.41
PTPN18-208ENST00000462996 SPATA31A5Q5VU36 1347 aa30.11■■■□□ 2.41
PTPN18-208ENST00000462996 SPATA31A7Q8IWB4 1347 aa30.11■■■□□ 2.41
PTPN18-208ENST00000462996 ANKARQ7Z5J8 1434 aa30.11■■■□□ 2.41
PTPN18-208ENST00000462996 ALS2Q96Q42 1657 aa30.11■■■□□ 2.41
PTPN18-208ENST00000462996 DISP2A7MBM2 1401 aa30.09■■■□□ 2.41
PTPN18-208ENST00000462996 TNS1Q9HBL0 1735 aaKnown RBP30.08■■■□□ 2.41
PTPN18-208ENST00000462996 EZH2Q15910 746 aaKnown RBP30.07■■■□□ 2.4
PTPN18-208ENST00000462996 POGKQ9P215 609 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms