RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 XRN1Q8IZH2 1706 aaKnown RBP15.38■□□□□ 0.05
TRAPPC3-205ENST00000462715 STRCP1A6NGW2 1772 aa15.37■□□□□ 0.05
TRAPPC3-205ENST00000462715 PKNOX2Q96KN3 472 aa15.37■□□□□ 0.05
TRAPPC3-205ENST00000462715 RSPH6AQ9H0K4 717 aa15.37■□□□□ 0.05
TRAPPC3-205ENST00000462715 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
TRAPPC3-205ENST00000462715 TMEM132EQ6IEE7 984 aa15.36■□□□□ 0.05
TRAPPC3-205ENST00000462715 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
TRAPPC3-205ENST00000462715 YTHDC2Q9H6S0 1430 aaKnown RBP15.36■□□□□ 0.05
TRAPPC3-205ENST00000462715 ADGRB1O14514 1584 aa15.36■□□□□ 0.05
TRAPPC3-205ENST00000462715 TRPM1Q7Z4N2 1603 aa15.35■□□□□ 0.05
TRAPPC3-205ENST00000462715 PROSER2Q86WR7 435 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC3-205ENST00000462715 PTCH1Q13635 1447 aa15.35■□□□□ 0.05
TRAPPC3-205ENST00000462715 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
TRAPPC3-205ENST00000462715 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
TRAPPC3-205ENST00000462715 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
TRAPPC3-205ENST00000462715 STK26Q9P289 416 aa15.34■□□□□ 0.05
TRAPPC3-205ENST00000462715 TECPR2O15040 1411 aa15.34■□□□□ 0.05
TRAPPC3-205ENST00000462715 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.05
TRAPPC3-205ENST00000462715 GLIPR1L2Q4G1C9 344 aa15.33■□□□□ 0.04
TRAPPC3-205ENST00000462715 ROCK2O75116 1388 aaKnown RBP15.33■□□□□ 0.04
TRAPPC3-205ENST00000462715 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC3-205ENST00000462715 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.04
TRAPPC3-205ENST00000462715 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
TRAPPC3-205ENST00000462715 TMEM94Q12767 1356 aa15.31■□□□□ 0.04
TRAPPC3-205ENST00000462715 NBPF1Q3BBV0 1214 aa15.31■□□□□ 0.04
TRAPPC3-205ENST00000462715 CERKQ8TCT0 537 aa15.31■□□□□ 0.04
TRAPPC3-205ENST00000462715 NCOA3Q9Y6Q9 1424 aa15.31■□□□□ 0.04
TRAPPC3-205ENST00000462715 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
TRAPPC3-205ENST00000462715 DLC1Q96QB1 1528 aa15.3■□□□□ 0.04
TRAPPC3-205ENST00000462715 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-205ENST00000462715 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
TRAPPC3-205ENST00000462715 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
TRAPPC3-205ENST00000462715 TRAK1Q9UPV9 953 aa15.29■□□□□ 0.04
TRAPPC3-205ENST00000462715 GPRASP1Q5JY77 1395 aa15.29■□□□□ 0.04
TRAPPC3-205ENST00000462715 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAPPC3-205ENST00000462715 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
TRAPPC3-205ENST00000462715 CARD11Q9BXL7 1154 aa15.27■□□□□ 0.03
TRAPPC3-205ENST00000462715 POGKQ9P215 609 aa15.27■□□□□ 0.03
TRAPPC3-205ENST00000462715 XIRP1Q702N8 1843 aaKnown RBP15.27■□□□□ 0.03
TRAPPC3-205ENST00000462715 MSH6P52701 1360 aa15.26■□□□□ 0.03
TRAPPC3-205ENST00000462715 RBM33Q96EV2 1170 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-205ENST00000462715 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
TRAPPC3-205ENST00000462715 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-205ENST00000462715 ARHGEF28Q8N1W1 1705 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-205ENST00000462715 WAPLQ7Z5K2 1190 aa15.25■□□□□ 0.03
TRAPPC3-205ENST00000462715 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
TRAPPC3-205ENST00000462715 C19orf44Q9H6X5 657 aa15.24■□□□□ 0.03
TRAPPC3-205ENST00000462715 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
TRAPPC3-205ENST00000462715 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
TRAPPC3-205ENST00000462715 DCCP43146 1447 aa15.23■□□□□ 0.03
TRAPPC3-205ENST00000462715 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
TRAPPC3-205ENST00000462715 NALCNQ8IZF0 1738 aa15.23■□□□□ 0.03
TRAPPC3-205ENST00000462715 ATF3P18847 181 aa15.22■□□□□ 0.03
TRAPPC3-205ENST00000462715 FAM43AQ8N2R8 423 aa15.22■□□□□ 0.03
TRAPPC3-205ENST00000462715 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC3-205ENST00000462715 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRAPPC3-205ENST00000462715 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.21■□□□□ 0.02
TRAPPC3-205ENST00000462715 TOM1O60784 492 aa15.21■□□□□ 0.02
TRAPPC3-205ENST00000462715 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.02
TRAPPC3-205ENST00000462715 CADPS2Q86UW7 1296 aa15.21■□□□□ 0.02
TRAPPC3-205ENST00000462715 B4GALNT3Q6L9W6 998 aa15.2■□□□□ 0.02
TRAPPC3-205ENST00000462715 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
TRAPPC3-205ENST00000462715 RNF123Q5XPI4 1314 aa15.19■□□□□ 0.02
TRAPPC3-205ENST00000462715 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
TRAPPC3-205ENST00000462715 ADGRB2O60241 1585 aa15.18■□□□□ 0.02
TRAPPC3-205ENST00000462715 NEFMP07197 916 aa15.18■□□□□ 0.02
TRAPPC3-205ENST00000462715 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC3-205ENST00000462715 USP47Q96K76 1375 aa15.18■□□□□ 0.02
TRAPPC3-205ENST00000462715 QRICH2Q9H0J4 1663 aa15.18■□□□□ 0.02
TRAPPC3-205ENST00000462715 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC3-205ENST00000462715 GSE1Q14687 1217 aa15.17■□□□□ 0.02
TRAPPC3-205ENST00000462715 SMG6Q86US8 1419 aaKnown RBP15.16■□□□□ 0.02
TRAPPC3-205ENST00000462715 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC3-205ENST00000462715 SBNO2Q9Y2G9 1366 aa15.14■□□□□ 0.01
TRAPPC3-205ENST00000462715 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
TRAPPC3-205ENST00000462715 SLAIN2Q9P270 581 aa15.14■□□□□ 0.01
TRAPPC3-205ENST00000462715 MST1RQ04912 1400 aa15.13■□□□□ 0.01
TRAPPC3-205ENST00000462715 FMN2Q9NZ56 1722 aa15.13■□□□□ 0.01
TRAPPC3-205ENST00000462715 WASLO00401 505 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC3-205ENST00000462715 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
TRAPPC3-205ENST00000462715 TCERG1O14776 1098 aaKnown RBP15.12■□□□□ 0.01
TRAPPC3-205ENST00000462715 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAPPC3-205ENST00000462715 MS4A1P11836 297 aa15.12■□□□□ 0.01
TRAPPC3-205ENST00000462715 FBXO41Q8TF61 875 aa15.12■□□□□ 0.01
TRAPPC3-205ENST00000462715 DDRGK1Q96HY6 314 aa15.12■□□□□ 0.01
TRAPPC3-205ENST00000462715 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
TRAPPC3-205ENST00000462715 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
TRAPPC3-205ENST00000462715 ANKARQ7Z5J8 1434 aa15.11■□□□□ 0.01
TRAPPC3-205ENST00000462715 C1orf167Q5SNV9 1468 aa15.1■□□□□ 0.01
TRAPPC3-205ENST00000462715 TULP4Q9NRJ4 1543 aa15.1■□□□□ 0.01
TRAPPC3-205ENST00000462715 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
TRAPPC3-205ENST00000462715 NUTM2FA1L443 756 aa15.08■□□□□ 0.01
TRAPPC3-205ENST00000462715 SRPK2P78362 688 aaKnown RBP15.08■□□□□ 0.01
TRAPPC3-205ENST00000462715 ROBO1Q9Y6N7 1651 aa15.08■□□□□ 0
TRAPPC3-205ENST00000462715 TESK2Q96S53 571 aa15.07■□□□□ 0
TRAPPC3-205ENST00000462715 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
TRAPPC3-205ENST00000462715 BRPF3Q9ULD4 1205 aa15.07■□□□□ 0
TRAPPC3-205ENST00000462715 ESCO1Q5FWF5 840 aa15.06■□□□□ 0
TRAPPC3-205ENST00000462715 TMF1P82094 1093 aa15.06■□□□□ 0
TRAPPC3-205ENST00000462715 BRINP3Q76B58 766 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms