RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 CPS1P31327 1500 aa20.55■□□□□ 0.88
RPRD1B-203ENST00000462548 CABP2Q9NPB3 220 aa20.55■□□□□ 0.88
RPRD1B-203ENST00000462548 TBX22Q9Y458 520 aa20.54■□□□□ 0.88
RPRD1B-203ENST00000462548 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
RPRD1B-203ENST00000462548 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
RPRD1B-203ENST00000462548 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.88
RPRD1B-203ENST00000462548 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.88
RPRD1B-203ENST00000462548 SIRT1Q96EB6 747 aa20.52■□□□□ 0.87
RPRD1B-203ENST00000462548 DIP2AQ14689 1571 aa20.52■□□□□ 0.87
RPRD1B-203ENST00000462548 CARD14Q9BXL6 1004 aa20.51■□□□□ 0.87
RPRD1B-203ENST00000462548 PARD3Q8TEW0 1356 aa20.51■□□□□ 0.87
RPRD1B-203ENST00000462548 ANKLE2Q86XL3 938 aa20.51■□□□□ 0.87
RPRD1B-203ENST00000462548 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
RPRD1B-203ENST00000462548 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
RPRD1B-203ENST00000462548 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
RPRD1B-203ENST00000462548 KDM4FA0A1W2PPD8 638 aa20.49■□□□□ 0.87
RPRD1B-203ENST00000462548 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
RPRD1B-203ENST00000462548 AMER1Q5JTC6 1135 aaPredicted RBP20.49■□□□□ 0.87
RPRD1B-203ENST00000462548 CDK19Q9BWU1 502 aa20.48■□□□□ 0.87
RPRD1B-203ENST00000462548 RALBP1Q15311 655 aa20.48■□□□□ 0.87
RPRD1B-203ENST00000462548 KNSTRNQ9Y448 316 aa20.48■□□□□ 0.87
RPRD1B-203ENST00000462548 AMOTL2Q9Y2J4 779 aa20.47■□□□□ 0.87
RPRD1B-203ENST00000462548 MRS2Q9HD23 443 aa20.47■□□□□ 0.87
RPRD1B-203ENST00000462548 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.46■□□□□ 0.87
RPRD1B-203ENST00000462548 XRN1Q8IZH2 1706 aaKnown RBP20.45■□□□□ 0.86
RPRD1B-203ENST00000462548 MYBBP1AQ9BQG0 1328 aaKnown RBP20.44■□□□□ 0.86
RPRD1B-203ENST00000462548 ATAD2Q6PL18 1390 aa20.43■□□□□ 0.86
RPRD1B-203ENST00000462548 NSD3Q9BZ95 1437 aa20.42■□□□□ 0.86
RPRD1B-203ENST00000462548 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
RPRD1B-203ENST00000462548 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
RPRD1B-203ENST00000462548 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
RPRD1B-203ENST00000462548 PTCH1Q13635 1447 aa20.42■□□□□ 0.86
RPRD1B-203ENST00000462548 ANKRD36BQ8N2N9 1353 aa20.41■□□□□ 0.86
RPRD1B-203ENST00000462548 NPC1L1Q9UHC9 1359 aa20.41■□□□□ 0.86
RPRD1B-203ENST00000462548 CD163L1Q9NR16 1453 aa20.41■□□□□ 0.86
RPRD1B-203ENST00000462548 PIK3R4Q99570 1358 aa20.4■□□□□ 0.86
RPRD1B-203ENST00000462548 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
RPRD1B-203ENST00000462548 KCNA6P17658 529 aa20.39■□□□□ 0.86
RPRD1B-203ENST00000462548 ADGRB2O60241 1585 aa20.39■□□□□ 0.85
RPRD1B-203ENST00000462548 A0A1W2PP64 1363 aa20.39■□□□□ 0.85
RPRD1B-203ENST00000462548 NINLQ9Y2I6 1382 aa20.39■□□□□ 0.85
RPRD1B-203ENST00000462548 CHD2O14647 1828 aaKnown RBP20.38■□□□□ 0.85
RPRD1B-203ENST00000462548 BRD4O60885 1362 aaPredicted RBP20.37■□□□□ 0.85
RPRD1B-203ENST00000462548 FAM9BQ8IZU0 186 aa20.37■□□□□ 0.85
RPRD1B-203ENST00000462548 CABP1Q9NZU7 370 aa20.37■□□□□ 0.85
RPRD1B-203ENST00000462548 USP32Q8NFA0 1604 aa20.36■□□□□ 0.85
RPRD1B-203ENST00000462548 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
RPRD1B-203ENST00000462548 PRR36Q9H6K5 1346 aa20.35■□□□□ 0.85
RPRD1B-203ENST00000462548 NUDT16Q96DE0 195 aaKnown RBP20.34■□□□□ 0.85
RPRD1B-203ENST00000462548 ATP7BP35670 1465 aa20.34■□□□□ 0.85
RPRD1B-203ENST00000462548 PPP2R1AP30153 589 aa20.34■□□□□ 0.85
RPRD1B-203ENST00000462548 HSPA2P54652 639 aa20.33■□□□□ 0.85
RPRD1B-203ENST00000462548 PNISRQ8TF01 805 aaKnown RBP20.33■□□□□ 0.85
RPRD1B-203ENST00000462548 PPIP5K1Q6PFW1 1433 aa20.32■□□□□ 0.84
RPRD1B-203ENST00000462548 TERF2IPQ9NYB0 399 aa20.31■□□□□ 0.84
RPRD1B-203ENST00000462548 LMTK3Q96Q04 1460 aa20.3■□□□□ 0.84
RPRD1B-203ENST00000462548 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
RPRD1B-203ENST00000462548 NUTM2FA1L443 756 aa20.29■□□□□ 0.84
RPRD1B-203ENST00000462548 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
RPRD1B-203ENST00000462548 HDGFL2Q7Z4V5 671 aaPredicted RBP20.28■□□□□ 0.84
RPRD1B-203ENST00000462548 TOPAZ1Q8N9V7 1692 aa20.28■□□□□ 0.84
RPRD1B-203ENST00000462548 RBM33Q96EV2 1170 aaKnown RBP20.28■□□□□ 0.84
RPRD1B-203ENST00000462548 CPSF1Q10570 1443 aaKnown RBP20.28■□□□□ 0.84
RPRD1B-203ENST00000462548 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
RPRD1B-203ENST00000462548 CDC42BPGQ6DT37 1551 aa20.27■□□□□ 0.84
RPRD1B-203ENST00000462548 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
RPRD1B-203ENST00000462548 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
RPRD1B-203ENST00000462548 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
RPRD1B-203ENST00000462548 NSD2O96028 1365 aa20.24■□□□□ 0.83
RPRD1B-203ENST00000462548 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
RPRD1B-203ENST00000462548 FYB1O15117 783 aa20.24■□□□□ 0.83
RPRD1B-203ENST00000462548 AKAP12Q02952 1782 aa20.24■□□□□ 0.83
RPRD1B-203ENST00000462548 GGNBP2Q9H3C7 697 aa20.23■□□□□ 0.83
RPRD1B-203ENST00000462548 RGPD8O14715 1765 aaPredicted RBP20.23■□□□□ 0.83
RPRD1B-203ENST00000462548 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
RPRD1B-203ENST00000462548 MON2Q7Z3U7 1717 aa20.22■□□□□ 0.83
RPRD1B-203ENST00000462548 FMN2Q9NZ56 1722 aa20.22■□□□□ 0.83
RPRD1B-203ENST00000462548 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
RPRD1B-203ENST00000462548 KIF20BQ96Q89 1820 aa20.21■□□□□ 0.83
RPRD1B-203ENST00000462548 ANKRD26Q9UPS8 1709 aa20.21■□□□□ 0.83
RPRD1B-203ENST00000462548 PLEKHG3A1L390 1219 aa20.21■□□□□ 0.83
RPRD1B-203ENST00000462548 STRCQ7RTU9 1775 aa20.2■□□□□ 0.82
RPRD1B-203ENST00000462548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.2■□□□□ 0.827e-7■■■□□ 16.2
RPRD1B-203ENST00000462548 EDC4Q6P2E9 1401 aaKnown RBP20.2■□□□□ 0.82
RPRD1B-203ENST00000462548 STRCP1A6NGW2 1772 aa20.19■□□□□ 0.82
RPRD1B-203ENST00000462548 ACEP12821 1306 aa20.19■□□□□ 0.82
RPRD1B-203ENST00000462548 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
RPRD1B-203ENST00000462548 ANKARQ7Z5J8 1434 aa20.17■□□□□ 0.82
RPRD1B-203ENST00000462548 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
RPRD1B-203ENST00000462548 PMFBP1Q8TBY8 1022 aa20.16■□□□□ 0.82
RPRD1B-203ENST00000462548 NRKQ7Z2Y5 1582 aa20.16■□□□□ 0.82
RPRD1B-203ENST00000462548 NME9Q86XW9 330 aa20.15■□□□□ 0.82
RPRD1B-203ENST00000462548 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
RPRD1B-203ENST00000462548 ZRANB1Q9UGI0 708 aa20.15■□□□□ 0.82
RPRD1B-203ENST00000462548 PROSER2Q86WR7 435 aaPredicted RBP20.14■□□□□ 0.82
RPRD1B-203ENST00000462548 POLR3AO14802 1390 aaPredicted RBP20.14■□□□□ 0.81
RPRD1B-203ENST00000462548 USP6P35125 1406 aa20.13■□□□□ 0.81
RPRD1B-203ENST00000462548 MTHFSP49914 203 aa20.13■□□□□ 0.81
RPRD1B-203ENST00000462548 ADAMTS8Q9UP79 889 aa20.13■□□□□ 0.81
RPRD1B-203ENST00000462548 ZBED9Q6R2W3 1325 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms