RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.28
RAE1-207ENST00000462438 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
RAE1-207ENST00000462438 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
RAE1-207ENST00000462438 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
RAE1-207ENST00000462438 MYOM1P52179 1685 aa16.81■□□□□ 0.28
RAE1-207ENST00000462438 NALCNQ8IZF0 1738 aa16.81■□□□□ 0.28
RAE1-207ENST00000462438 TOPAZ1Q8N9V7 1692 aa16.81■□□□□ 0.28
RAE1-207ENST00000462438 SLC26A8Q96RN1 970 aa16.8■□□□□ 0.28
RAE1-207ENST00000462438 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
RAE1-207ENST00000462438 CCDC7Q96M83 1385 aa16.8■□□□□ 0.28
RAE1-207ENST00000462438 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
RAE1-207ENST00000462438 DCCP43146 1447 aa16.8■□□□□ 0.28
RAE1-207ENST00000462438 HSPA2P54652 639 aa16.8■□□□□ 0.28
RAE1-207ENST00000462438 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
RAE1-207ENST00000462438 TMF1P82094 1093 aa16.79■□□□□ 0.28
RAE1-207ENST00000462438 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
RAE1-207ENST00000462438 BCANQ96GW7 911 aa16.79■□□□□ 0.28
RAE1-207ENST00000462438 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
RAE1-207ENST00000462438 XIRP1Q702N8 1843 aaKnown RBP16.78■□□□□ 0.28
RAE1-207ENST00000462438 ADGRL3Q9HAR2 1447 aa16.78■□□□□ 0.28
RAE1-207ENST00000462438 ANKARQ7Z5J8 1434 aa16.77■□□□□ 0.27
RAE1-207ENST00000462438 TSHZ2Q9NRE2 1034 aa16.76■□□□□ 0.27
RAE1-207ENST00000462438 PRAM1Q96QH2 718 aa16.76■□□□□ 0.27
RAE1-207ENST00000462438 DISP3Q9P2K9 1392 aa16.76■□□□□ 0.27
RAE1-207ENST00000462438 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
RAE1-207ENST00000462438 PLEKHH1Q9ULM0 1364 aa16.75■□□□□ 0.27
RAE1-207ENST00000462438 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
RAE1-207ENST00000462438 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
RAE1-207ENST00000462438 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
RAE1-207ENST00000462438 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
RAE1-207ENST00000462438 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
RAE1-207ENST00000462438 POGKQ9P215 609 aa16.73■□□□□ 0.27
RAE1-207ENST00000462438 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
RAE1-207ENST00000462438 LRRC7Q96NW7 1537 aa16.72■□□□□ 0.27
RAE1-207ENST00000462438 STK26Q9P289 416 aa16.72■□□□□ 0.27
RAE1-207ENST00000462438 ATP7BP35670 1465 aa16.71■□□□□ 0.26
RAE1-207ENST00000462438 AKAP12Q02952 1782 aa16.7■□□□□ 0.26
RAE1-207ENST00000462438 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
RAE1-207ENST00000462438 KIF1AQ12756 1690 aa16.69■□□□□ 0.26
RAE1-207ENST00000462438 C11orf95C9JLR9 678 aaPredicted RBP16.69■□□□□ 0.26
RAE1-207ENST00000462438 WASLO00401 505 aaPredicted RBP16.69■□□□□ 0.26
RAE1-207ENST00000462438 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
RAE1-207ENST00000462438 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
RAE1-207ENST00000462438 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
RAE1-207ENST00000462438 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
RAE1-207ENST00000462438 BRD4O60885 1362 aaPredicted RBP16.65■□□□□ 0.26
RAE1-207ENST00000462438 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
RAE1-207ENST00000462438 USP54Q70EL1 1684 aa16.64■□□□□ 0.25
RAE1-207ENST00000462438 TMEM94Q12767 1356 aa16.63■□□□□ 0.25
RAE1-207ENST00000462438 NPC1L1Q9UHC9 1359 aa16.63■□□□□ 0.25
RAE1-207ENST00000462438 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
RAE1-207ENST00000462438 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
RAE1-207ENST00000462438 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
RAE1-207ENST00000462438 CD163L1Q9NR16 1453 aa16.62■□□□□ 0.25
RAE1-207ENST00000462438 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
RAE1-207ENST00000462438 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
RAE1-207ENST00000462438 C19orf44Q9H6X5 657 aa16.62■□□□□ 0.25
RAE1-207ENST00000462438 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
RAE1-207ENST00000462438 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
RAE1-207ENST00000462438 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
RAE1-207ENST00000462438 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
RAE1-207ENST00000462438 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
RAE1-207ENST00000462438 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
RAE1-207ENST00000462438 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
RAE1-207ENST00000462438 MSH6P52701 1360 aa16.6■□□□□ 0.25
RAE1-207ENST00000462438 KTN1Q86UP2 1357 aaKnown RBP16.6■□□□□ 0.25
RAE1-207ENST00000462438 MST1RQ04912 1400 aa16.59■□□□□ 0.25
RAE1-207ENST00000462438 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
RAE1-207ENST00000462438 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
RAE1-207ENST00000462438 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
RAE1-207ENST00000462438 KIF20BQ96Q89 1820 aa16.57■□□□□ 0.24
RAE1-207ENST00000462438 C1orf167Q5SNV9 1468 aa16.57■□□□□ 0.24
RAE1-207ENST00000462438 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
RAE1-207ENST00000462438 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
RAE1-207ENST00000462438 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
RAE1-207ENST00000462438 NSD2O96028 1365 aa16.56■□□□□ 0.24
RAE1-207ENST00000462438 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
RAE1-207ENST00000462438 CADPS2Q86UW7 1296 aa16.56■□□□□ 0.24
RAE1-207ENST00000462438 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
RAE1-207ENST00000462438 SAFB2Q14151 953 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAE1-207ENST00000462438 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
RAE1-207ENST00000462438 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
RAE1-207ENST00000462438 EDC4Q6P2E9 1401 aaKnown RBP16.54■□□□□ 0.24
RAE1-207ENST00000462438 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
RAE1-207ENST00000462438 MIER1Q8N108 512 aa16.54■□□□□ 0.24
RAE1-207ENST00000462438 NHSL1Q5SYE7 1610 aa16.53■□□□□ 0.24
RAE1-207ENST00000462438 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
RAE1-207ENST00000462438 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
RAE1-207ENST00000462438 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
RAE1-207ENST00000462438 A0A1W2PP64 1363 aa16.52■□□□□ 0.24
RAE1-207ENST00000462438 USP6P35125 1406 aa16.5■□□□□ 0.23
RAE1-207ENST00000462438 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
RAE1-207ENST00000462438 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
RAE1-207ENST00000462438 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
RAE1-207ENST00000462438 ATF3P18847 181 aa16.5■□□□□ 0.23
RAE1-207ENST00000462438 PANK3Q9H999 370 aa16.49■□□□□ 0.23
RAE1-207ENST00000462438 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
RAE1-207ENST00000462438 ALS2Q96Q42 1657 aa16.48■□□□□ 0.23
RAE1-207ENST00000462438 NSD3Q9BZ95 1437 aa16.48■□□□□ 0.23
RAE1-207ENST00000462438 SLC12A5Q9H2X9 1139 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms