RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 KNDC1Q76NI1 1749 aa18.57■□□□□ 0.56
PHGDH-203ENST00000462324 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
PHGDH-203ENST00000462324 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-203ENST00000462324 SLC24A1O60721 1099 aa18.55■□□□□ 0.56
PHGDH-203ENST00000462324 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHGDH-203ENST00000462324 ADGRL3Q9HAR2 1447 aa18.55■□□□□ 0.56
PHGDH-203ENST00000462324 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
PHGDH-203ENST00000462324 DCCP43146 1447 aa18.54■□□□□ 0.56
PHGDH-203ENST00000462324 SLAIN2Q9P270 581 aa18.51■□□□□ 0.55
PHGDH-203ENST00000462324 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-203ENST00000462324 USP47Q96K76 1375 aa18.48■□□□□ 0.55
PHGDH-203ENST00000462324 WASLO00401 505 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-203ENST00000462324 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.557e-14■■■■■ 63.8
PHGDH-203ENST00000462324 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-203ENST00000462324 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
PHGDH-203ENST00000462324 XIRP1Q702N8 1843 aaKnown RBP18.46■□□□□ 0.55
PHGDH-203ENST00000462324 ARHGEF28Q8N1W1 1705 aaKnown RBP18.46■□□□□ 0.55
PHGDH-203ENST00000462324 EVC2Q86UK5 1308 aa18.46■□□□□ 0.55
PHGDH-203ENST00000462324 SBNO2Q9Y2G9 1366 aa18.45■□□□□ 0.54
PHGDH-203ENST00000462324 CDK19Q9BWU1 502 aa18.45■□□□□ 0.54
PHGDH-203ENST00000462324 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-203ENST00000462324 PIP4K2BP78356 416 aa18.44■□□□□ 0.54
PHGDH-203ENST00000462324 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
PHGDH-203ENST00000462324 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
PHGDH-203ENST00000462324 MST1RQ04912 1400 aa18.42■□□□□ 0.54
PHGDH-203ENST00000462324 NALCNQ8IZF0 1738 aa18.42■□□□□ 0.54
PHGDH-203ENST00000462324 ADGRB2O60241 1585 aa18.42■□□□□ 0.54
PHGDH-203ENST00000462324 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
PHGDH-203ENST00000462324 PUS7Q96PZ0 661 aaKnown RBP18.41■□□□□ 0.54
PHGDH-203ENST00000462324 TESK2Q96S53 571 aa18.41■□□□□ 0.54
PHGDH-203ENST00000462324 C1orf167Q5SNV9 1468 aa18.4■□□□□ 0.54
PHGDH-203ENST00000462324 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
PHGDH-203ENST00000462324 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
PHGDH-203ENST00000462324 TMF1P82094 1093 aa18.4■□□□□ 0.54
PHGDH-203ENST00000462324 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
PHGDH-203ENST00000462324 ESCO1Q5FWF5 840 aa18.4■□□□□ 0.54
PHGDH-203ENST00000462324 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
PHGDH-203ENST00000462324 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
PHGDH-203ENST00000462324 CCDC61Q9Y6R9 512 aa18.38■□□□□ 0.53
PHGDH-203ENST00000462324 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
PHGDH-203ENST00000462324 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
PHGDH-203ENST00000462324 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
PHGDH-203ENST00000462324 QRICH2Q9H0J4 1663 aa18.37■□□□□ 0.53
PHGDH-203ENST00000462324 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
PHGDH-203ENST00000462324 PHF8Q9UPP1 1060 aa18.35■□□□□ 0.53
PHGDH-203ENST00000462324 ATAD2Q6PL18 1390 aa18.34■□□□□ 0.53
PHGDH-203ENST00000462324 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
PHGDH-203ENST00000462324 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.52
PHGDH-203ENST00000462324 PLEKHG3A1L390 1219 aa18.32■□□□□ 0.52
PHGDH-203ENST00000462324 NPHP3Q7Z494 1330 aa18.31■□□□□ 0.52
PHGDH-203ENST00000462324 FOXO3O43524 673 aa18.3■□□□□ 0.52
PHGDH-203ENST00000462324 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
PHGDH-203ENST00000462324 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
PHGDH-203ENST00000462324 ATP7BP35670 1465 aa18.29■□□□□ 0.52
PHGDH-203ENST00000462324 PSME1Q06323 249 aa18.29■□□□□ 0.52
PHGDH-203ENST00000462324 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
PHGDH-203ENST00000462324 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
PHGDH-203ENST00000462324 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
PHGDH-203ENST00000462324 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
PHGDH-203ENST00000462324 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-203ENST00000462324 HSPA1LP34931 641 aa18.26■□□□□ 0.51
PHGDH-203ENST00000462324 KRT28Q7Z3Y7 464 aa18.26■□□□□ 0.51
PHGDH-203ENST00000462324 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
PHGDH-203ENST00000462324 LRRC59Q96AG4 307 aaKnown RBP18.26■□□□□ 0.51
PHGDH-203ENST00000462324 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
PHGDH-203ENST00000462324 ACEP12821 1306 aa18.25■□□□□ 0.51
PHGDH-203ENST00000462324 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-203ENST00000462324 USP32Q8NFA0 1604 aa18.25■□□□□ 0.51
PHGDH-203ENST00000462324 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
PHGDH-203ENST00000462324 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
PHGDH-203ENST00000462324 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-203ENST00000462324 KIF1AQ12756 1690 aa18.23■□□□□ 0.51
PHGDH-203ENST00000462324 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-203ENST00000462324 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
PHGDH-203ENST00000462324 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-203ENST00000462324 BRD4O60885 1362 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-203ENST00000462324 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
PHGDH-203ENST00000462324 ITSN1Q15811 1721 aa18.2■□□□□ 0.5
PHGDH-203ENST00000462324 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-203ENST00000462324 SBNO1A3KN83 1393 aa18.19■□□□□ 0.5
PHGDH-203ENST00000462324 C11orf95C9JLR9 678 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-203ENST00000462324 RGPD8O14715 1765 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-203ENST00000462324 TOPAZ1Q8N9V7 1692 aa18.18■□□□□ 0.5
PHGDH-203ENST00000462324 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
PHGDH-203ENST00000462324 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
PHGDH-203ENST00000462324 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-203ENST00000462324 PXDNQ92626 1479 aa18.17■□□□□ 0.5
PHGDH-203ENST00000462324 KIF7Q2M1P5 1343 aa18.17■□□□□ 0.5
PHGDH-203ENST00000462324 SPATA31A3Q5VYP0 1347 aa18.17■□□□□ 0.5
PHGDH-203ENST00000462324 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
PHGDH-203ENST00000462324 JCADQ9P266 1359 aa18.17■□□□□ 0.5
PHGDH-203ENST00000462324 PHLPP1O60346 1717 aa18.16■□□□□ 0.5
PHGDH-203ENST00000462324 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
PHGDH-203ENST00000462324 USP6P35125 1406 aa18.15■□□□□ 0.5
PHGDH-203ENST00000462324 LMOD2Q6P5Q4 547 aa18.14■□□□□ 0.49
PHGDH-203ENST00000462324 ARHGEF10O15013 1369 aa18.14■□□□□ 0.49
PHGDH-203ENST00000462324 CCDC7Q96M83 1385 aa18.14■□□□□ 0.49
PHGDH-203ENST00000462324 TTC21AQ8NDW8 1320 aa18.13■□□□□ 0.49
PHGDH-203ENST00000462324 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-203ENST00000462324 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms