RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
CALD1-213ENST00000462181 PCDHB15Q9Y5E8 787 aa12.02□□□□□ -0.49
CALD1-213ENST00000462181 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
CALD1-213ENST00000462181 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
CALD1-213ENST00000462181 RNF19BQ6ZMZ0 732 aa12□□□□□ -0.49
CALD1-213ENST00000462181 PROCA1Q8NCQ7 364 aaPredicted RBP12□□□□□ -0.49
CALD1-213ENST00000462181 BRICD5Q6PL45 260 aa11.99□□□□□ -0.49
CALD1-213ENST00000462181 SYMPKQ92797 1274 aaKnown RBP11.99□□□□□ -0.49
CALD1-213ENST00000462181 SPSB2Q99619 263 aa11.99□□□□□ -0.49
CALD1-213ENST00000462181 NUTM2BA6NNL0 878 aaPredicted RBP11.98□□□□□ -0.49
CALD1-213ENST00000462181 NUTM2EB1AL46 878 aaPredicted RBP11.98□□□□□ -0.49
CALD1-213ENST00000462181 TLL1O43897 1013 aa11.98□□□□□ -0.49
CALD1-213ENST00000462181 MTMR2Q13614 643 aa11.98□□□□□ -0.49
CALD1-213ENST00000462181 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
CALD1-213ENST00000462181 NUTM2AQ8IVF1 878 aaPredicted RBP11.98□□□□□ -0.49
CALD1-213ENST00000462181 THAP11Q96EK4 314 aa11.98□□□□□ -0.49
CALD1-213ENST00000462181 ZBTB3Q9H5J0 574 aa11.98□□□□□ -0.49
CALD1-213ENST00000462181 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
CALD1-213ENST00000462181 NKX2-3Q8TAU0 364 aa11.97□□□□□ -0.49
CALD1-213ENST00000462181 PLA2G2EQ9NZK7 142 aa11.97□□□□□ -0.49
CALD1-213ENST00000462181 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.49
CALD1-213ENST00000462181 ADH1BP00325 375 aa11.96□□□□□ -0.49
CALD1-213ENST00000462181 HRCP23327 699 aa11.96□□□□□ -0.49
CALD1-213ENST00000462181 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
CALD1-213ENST00000462181 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
CALD1-213ENST00000462181 QPCTQ16769 361 aa11.95□□□□□ -0.5
CALD1-213ENST00000462181 RETREG3Q86VR2 466 aa11.95□□□□□ -0.5
CALD1-213ENST00000462181 CABLES1Q8TDN4 633 aa11.95□□□□□ -0.5
CALD1-213ENST00000462181 LILRB3O75022 631 aa11.94□□□□□ -0.5
CALD1-213ENST00000462181 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
CALD1-213ENST00000462181 SLC6A16Q9GZN6 736 aa11.92□□□□□ -0.5
CALD1-213ENST00000462181 FAM160A2Q8N612 972 aaPredicted RBP11.91□□□□□ -0.5
CALD1-213ENST00000462181 PRR7Q8TB68 274 aa11.91□□□□□ -0.5
CALD1-213ENST00000462181 MSS51Q4VC12 460 aa11.9□□□□□ -0.5
CALD1-213ENST00000462181 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
CALD1-213ENST00000462181 PPP2R2DQ66LE6 453 aa11.89□□□□□ -0.51
CALD1-213ENST00000462181 GGCXP38435 758 aa11.88□□□□□ -0.51
CALD1-213ENST00000462181 TSC1Q92574 1164 aa11.88□□□□□ -0.51
CALD1-213ENST00000462181 S1PR4O95977 384 aa11.87□□□□□ -0.51
CALD1-213ENST00000462181 CFAP99D6REC4 459 aa11.86□□□□□ -0.51
CALD1-213ENST00000462181 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
CALD1-213ENST00000462181 RFC5P40937 340 aa11.85□□□□□ -0.51
CALD1-213ENST00000462181 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
CALD1-213ENST00000462181 HELBQ8NG08 1087 aaPredicted RBP11.85□□□□□ -0.51
CALD1-213ENST00000462181 PRDM9Q9NQV7 894 aa11.85□□□□□ -0.51
CALD1-213ENST00000462181 JUNDP17535 347 aa11.84□□□□□ -0.51
CALD1-213ENST00000462181 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.84□□□□□ -0.51
CALD1-213ENST00000462181 MMP16P51512 607 aa11.83□□□□□ -0.52
CALD1-213ENST00000462181 DESI1Q6ICB0 168 aa11.83□□□□□ -0.52
CALD1-213ENST00000462181 AP1G2O75843 785 aa11.82□□□□□ -0.52
CALD1-213ENST00000462181 DXOO77932 396 aaKnown RBP11.82□□□□□ -0.52
CALD1-213ENST00000462181 TMEM259Q4ZIN3 620 aa11.81□□□□□ -0.52
CALD1-213ENST00000462181 A0A0G2JS52 829 aa11.8□□□□□ -0.52
CALD1-213ENST00000462181 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
CALD1-213ENST00000462181 PPEF1O14829 653 aaPredicted RBP11.8□□□□□ -0.52
CALD1-213ENST00000462181 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
CALD1-213ENST00000462181 LYPD8Q6UX82 237 aa11.78□□□□□ -0.52
CALD1-213ENST00000462181 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
CALD1-213ENST00000462181 PTPRNQ16849 979 aa11.77□□□□□ -0.53
CALD1-213ENST00000462181 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
CALD1-213ENST00000462181 ANKLE1Q8NAG6 615 aa11.77□□□□□ -0.53
CALD1-213ENST00000462181 NUDT12Q9BQG2 462 aa11.77□□□□□ -0.53
CALD1-213ENST00000462181 PER1O15534 1290 aaPredicted RBP11.75□□□□□ -0.53
CALD1-213ENST00000462181 CCNYL3P0C7X3 344 aa11.74□□□□□ -0.53
CALD1-213ENST00000462181 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
CALD1-213ENST00000462181 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
CALD1-213ENST00000462181 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
CALD1-213ENST00000462181 CTHP32929 405 aa11.71□□□□□ -0.53
CALD1-213ENST00000462181 LRRN4Q8WUT4 740 aa11.71□□□□□ -0.53
CALD1-213ENST00000462181 ZBTB24O43167 697 aaPredicted RBP11.7□□□□□ -0.54
CALD1-213ENST00000462181 KCNH2Q12809 1159 aa11.69□□□□□ -0.54
CALD1-213ENST00000462181 PLA2G2CQ5R387 149 aa11.68□□□□□ -0.54
CALD1-213ENST00000462181 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
CALD1-213ENST00000462181 PTCRAQ6ISU1 281 aaPredicted RBP11.66□□□□□ -0.54
CALD1-213ENST00000462181 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
CALD1-213ENST00000462181 MAP10Q9P2G4 905 aa11.66□□□□□ -0.54
CALD1-213ENST00000462181 SLC19A1P41440 591 aa11.65□□□□□ -0.54
CALD1-213ENST00000462181 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
CALD1-213ENST00000462181 RPIAP49247 311 aa11.64□□□□□ -0.55
CALD1-213ENST00000462181 NR6A1Q15406 480 aa11.64□□□□□ -0.55
CALD1-213ENST00000462181 PRKD2Q9BZL6 878 aa11.64□□□□□ -0.55
CALD1-213ENST00000462181 UNC93B1Q9H1C4 597 aa11.64□□□□□ -0.55
CALD1-213ENST00000462181 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
CALD1-213ENST00000462181 FLIIQ13045 1269 aa11.63□□□□□ -0.55
CALD1-213ENST00000462181 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
CALD1-213ENST00000462181 APBB1O00213 710 aa11.62□□□□□ -0.55
CALD1-213ENST00000462181 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
CALD1-213ENST00000462181 MTMR14Q8NCE2 650 aa11.61□□□□□ -0.55
CALD1-213ENST00000462181 V9GY48 417 aaPredicted RBP11.61□□□□□ -0.55
CALD1-213ENST00000462181 SOCS7O14512 581 aa11.6□□□□□ -0.55
CALD1-213ENST00000462181 RGS20O76081 388 aa11.6□□□□□ -0.55
CALD1-213ENST00000462181 MCM6Q14566 821 aa11.6□□□□□ -0.55
CALD1-213ENST00000462181 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
CALD1-213ENST00000462181 EPS8L1Q8TE68 723 aa11.6□□□□□ -0.55
CALD1-213ENST00000462181 EMID1Q96A84 441 aaPredicted RBP11.6□□□□□ -0.55
CALD1-213ENST00000462181 TRIM32Q13049 653 aa11.59□□□□□ -0.55
CALD1-213ENST00000462181 PNMA1Q8ND90 353 aa11.59□□□□□ -0.55
CALD1-213ENST00000462181 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
CALD1-213ENST00000462181 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
CALD1-213ENST00000462181 GJD4Q96KN9 370 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms