RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 SOS2Q07890 1332 aaPredicted RBP17.62■□□□□ 0.41
SCAMP3-203ENST00000462151 ABCC11Q96J66 1382 aa17.62■□□□□ 0.41
SCAMP3-203ENST00000462151 AFF2P51816 1311 aa17.61■□□□□ 0.41
SCAMP3-203ENST00000462151 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
SCAMP3-203ENST00000462151 KNDC1Q76NI1 1749 aa17.61■□□□□ 0.41
SCAMP3-203ENST00000462151 RXRBP28702 533 aa17.6■□□□□ 0.41
SCAMP3-203ENST00000462151 TMEM132EQ6IEE7 984 aa17.6■□□□□ 0.41
SCAMP3-203ENST00000462151 WAPLQ7Z5K2 1190 aa17.6■□□□□ 0.41
SCAMP3-203ENST00000462151 ESCO1Q5FWF5 840 aa17.59■□□□□ 0.41
SCAMP3-203ENST00000462151 YTHDC2Q9H6S0 1430 aaKnown RBP17.58■□□□□ 0.41
SCAMP3-203ENST00000462151 NPHP3Q7Z494 1330 aa17.58■□□□□ 0.4
SCAMP3-203ENST00000462151 C8orf37Q96NL8 207 aa17.58■□□□□ 0.4
SCAMP3-203ENST00000462151 MYOM2P54296 1465 aa17.57■□□□□ 0.4
SCAMP3-203ENST00000462151 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
SCAMP3-203ENST00000462151 C14orf93Q9H972 538 aaKnown RBP17.56■□□□□ 0.4
SCAMP3-203ENST00000462151 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
SCAMP3-203ENST00000462151 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
SCAMP3-203ENST00000462151 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
SCAMP3-203ENST00000462151 SIRT1Q96EB6 747 aa17.55■□□□□ 0.4
SCAMP3-203ENST00000462151 DHX57Q6P158 1386 aaKnown RBP17.54■□□□□ 0.4
SCAMP3-203ENST00000462151 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
SCAMP3-203ENST00000462151 PXDNQ92626 1479 aa17.53■□□□□ 0.4
SCAMP3-203ENST00000462151 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
SCAMP3-203ENST00000462151 FOXO3O43524 673 aa17.53■□□□□ 0.4
SCAMP3-203ENST00000462151 CFAP70Q5T0N1 1121 aa17.53■□□□□ 0.4
SCAMP3-203ENST00000462151 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
SCAMP3-203ENST00000462151 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
SCAMP3-203ENST00000462151 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
SCAMP3-203ENST00000462151 FMN2Q9NZ56 1722 aa17.51■□□□□ 0.39
SCAMP3-203ENST00000462151 HRCP23327 699 aa17.5■□□□□ 0.39
SCAMP3-203ENST00000462151 XPCQ01831 940 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-203ENST00000462151 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCAMP3-203ENST00000462151 KIF1AQ12756 1690 aa17.48■□□□□ 0.39
SCAMP3-203ENST00000462151 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
SCAMP3-203ENST00000462151 FNBP4Q8N3X1 1017 aaPredicted RBP17.47■□□□□ 0.39
SCAMP3-203ENST00000462151 USP21Q9UK80 565 aa17.47■□□□□ 0.39
SCAMP3-203ENST00000462151 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
SCAMP3-203ENST00000462151 RGS12O14924 1447 aa17.47■□□□□ 0.39
SCAMP3-203ENST00000462151 POGKQ9P215 609 aa17.46■□□□□ 0.39
SCAMP3-203ENST00000462151 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
SCAMP3-203ENST00000462151 STAC3Q96MF2 364 aa17.45■□□□□ 0.38
SCAMP3-203ENST00000462151 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCAMP3-203ENST00000462151 DCAF11Q8TEB1 546 aa17.44■□□□□ 0.38
SCAMP3-203ENST00000462151 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
SCAMP3-203ENST00000462151 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
SCAMP3-203ENST00000462151 ADGRB1O14514 1584 aa17.44■□□□□ 0.38
SCAMP3-203ENST00000462151 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
SCAMP3-203ENST00000462151 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
SCAMP3-203ENST00000462151 ATRNO75882 1429 aa17.42■□□□□ 0.38
SCAMP3-203ENST00000462151 PSME1Q06323 249 aa17.42■□□□□ 0.38
SCAMP3-203ENST00000462151 MARF1Q9Y4F3 1742 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-203ENST00000462151 ANKARQ7Z5J8 1434 aa17.41■□□□□ 0.38
SCAMP3-203ENST00000462151 TRAK1Q9UPV9 953 aa17.41■□□□□ 0.38
SCAMP3-203ENST00000462151 ADGRB2O60241 1585 aa17.4■□□□□ 0.38
SCAMP3-203ENST00000462151 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-203ENST00000462151 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.38
SCAMP3-203ENST00000462151 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
SCAMP3-203ENST00000462151 BCL9LQ86UU0 1499 aa17.38■□□□□ 0.37
SCAMP3-203ENST00000462151 SBNO1A3KN83 1393 aa17.38■□□□□ 0.37
SCAMP3-203ENST00000462151 HAP1P54257 671 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-203ENST00000462151 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-203ENST00000462151 MINK1Q8N4C8 1332 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-203ENST00000462151 ARHGEF10O15013 1369 aa17.36■□□□□ 0.37
SCAMP3-203ENST00000462151 ATAD2Q6PL18 1390 aa17.36■□□□□ 0.37
SCAMP3-203ENST00000462151 USP32Q8NFA0 1604 aa17.36■□□□□ 0.37
SCAMP3-203ENST00000462151 PMFBP1Q8TBY8 1022 aa17.35■□□□□ 0.37
SCAMP3-203ENST00000462151 SLIT2O94813 1529 aa17.34■□□□□ 0.37
SCAMP3-203ENST00000462151 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
SCAMP3-203ENST00000462151 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
SCAMP3-203ENST00000462151 GJD4Q96KN9 370 aaPredicted RBP17.34■□□□□ 0.37
SCAMP3-203ENST00000462151 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.34■□□□□ 0.37
SCAMP3-203ENST00000462151 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
SCAMP3-203ENST00000462151 WASLO00401 505 aaPredicted RBP17.33■□□□□ 0.36
SCAMP3-203ENST00000462151 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
SCAMP3-203ENST00000462151 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
SCAMP3-203ENST00000462151 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
SCAMP3-203ENST00000462151 PRR36Q9H6K5 1346 aa17.3■□□□□ 0.36
SCAMP3-203ENST00000462151 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
SCAMP3-203ENST00000462151 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
SCAMP3-203ENST00000462151 ABCA3Q99758 1704 aa17.29■□□□□ 0.36
SCAMP3-203ENST00000462151 EP400Q96L91 3159 aa17.29■□□□□ 0.36
SCAMP3-203ENST00000462151 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
SCAMP3-203ENST00000462151 NGDNQ8NEJ9 315 aaKnown RBP17.28■□□□□ 0.36
SCAMP3-203ENST00000462151 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.36
SCAMP3-203ENST00000462151 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.36
SCAMP3-203ENST00000462151 GLI3P10071 1580 aa17.27■□□□□ 0.35
SCAMP3-203ENST00000462151 VPS72Q15906 364 aa17.26■□□□□ 0.35
SCAMP3-203ENST00000462151 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
SCAMP3-203ENST00000462151 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
SCAMP3-203ENST00000462151 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
SCAMP3-203ENST00000462151 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
SCAMP3-203ENST00000462151 ATP7BP35670 1465 aa17.24■□□□□ 0.35
SCAMP3-203ENST00000462151 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
SCAMP3-203ENST00000462151 CCDC125Q86Z20 511 aa17.24■□□□□ 0.35
SCAMP3-203ENST00000462151 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
SCAMP3-203ENST00000462151 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
SCAMP3-203ENST00000462151 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
SCAMP3-203ENST00000462151 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
SCAMP3-203ENST00000462151 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
SCAMP3-203ENST00000462151 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms