RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 MROH2AA6NES4 1674 aa23.65■■□□□ 1.38
HPS3-204ENST00000462030 KIF1BO60333 1816 aa23.65■■□□□ 1.38
HPS3-204ENST00000462030 ATP7AQ04656 1500 aa23.64■■□□□ 1.38
HPS3-204ENST00000462030 BCL2L13Q9BXK5 485 aa23.64■■□□□ 1.37
HPS3-204ENST00000462030 MORC1Q86VD1 984 aa23.63■■□□□ 1.37
HPS3-204ENST00000462030 TCP11L2Q8N4U5 519 aa23.63■■□□□ 1.37
HPS3-204ENST00000462030 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
HPS3-204ENST00000462030 PMFBP1Q8TBY8 1022 aa23.62■■□□□ 1.37
HPS3-204ENST00000462030 INO80Q9ULG1 1556 aaPredicted RBP23.62■■□□□ 1.37
HPS3-204ENST00000462030 MROH1Q8NDA8 1641 aa23.62■■□□□ 1.37
HPS3-204ENST00000462030 PDZRN3Q9UPQ7 1066 aa23.61■■□□□ 1.37
HPS3-204ENST00000462030 SBNO2Q9Y2G9 1366 aa23.61■■□□□ 1.37
HPS3-204ENST00000462030 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
HPS3-204ENST00000462030 ANTXR1Q9H6X2 564 aa23.6■■□□□ 1.37
HPS3-204ENST00000462030 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
HPS3-204ENST00000462030 TBC1D32Q96NH3 1257 aa23.58■■□□□ 1.37
HPS3-204ENST00000462030 SLC12A5Q9H2X9 1139 aa23.58■■□□□ 1.37
HPS3-204ENST00000462030 UHRF1BP1LA0JNW5 1464 aa23.58■■□□□ 1.37
HPS3-204ENST00000462030 NRXN1Q9ULB1 1477 aa23.57■■□□□ 1.36
HPS3-204ENST00000462030 WDR63Q8IWG1 891 aa23.56■■□□□ 1.36
HPS3-204ENST00000462030 TBC1D2Q9BYX2 928 aa23.56■■□□□ 1.36
HPS3-204ENST00000462030 UPF2Q9HAU5 1272 aaKnown RBP23.56■■□□□ 1.36
HPS3-204ENST00000462030 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
HPS3-204ENST00000462030 AAMPQ13685 434 aa23.55■■□□□ 1.36
HPS3-204ENST00000462030 FAM43AQ8N2R8 423 aa23.55■■□□□ 1.36
HPS3-204ENST00000462030 TRAK1Q9UPV9 953 aa23.55■■□□□ 1.36
HPS3-204ENST00000462030 EFCAB6Q5THR3 1501 aa23.55■■□□□ 1.36
HPS3-204ENST00000462030 NOS1P29475 1434 aa23.55■■□□□ 1.36
HPS3-204ENST00000462030 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
HPS3-204ENST00000462030 ZMYM3Q14202 1370 aa23.54■■□□□ 1.36
HPS3-204ENST00000462030 MTHFSP49914 203 aa23.53■■□□□ 1.36
HPS3-204ENST00000462030 ZNF518AQ6AHZ1 1483 aa23.53■■□□□ 1.36
HPS3-204ENST00000462030 PPRC1Q5VV67 1664 aaKnown RBP23.53■■□□□ 1.36
HPS3-204ENST00000462030 FANCAO15360 1455 aa23.53■■□□□ 1.36
HPS3-204ENST00000462030 RWDD1Q9H446 243 aaPredicted RBP23.52■■□□□ 1.36
HPS3-204ENST00000462030 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
HPS3-204ENST00000462030 ABCA9Q8IUA7 1624 aa23.51■■□□□ 1.35
HPS3-204ENST00000462030 CHGAP10645 457 aaKnown RBP23.5■■□□□ 1.35
HPS3-204ENST00000462030 CCDC27Q2M243 656 aa23.5■■□□□ 1.35
HPS3-204ENST00000462030 ADGRB3O60242 1522 aa23.49■■□□□ 1.35
HPS3-204ENST00000462030 MVPQ14764 893 aaKnown RBP23.49■■□□□ 1.35
HPS3-204ENST00000462030 USP32Q8NFA0 1604 aa23.48■■□□□ 1.35
HPS3-204ENST00000462030 SPRYD3Q8NCJ5 442 aa23.48■■□□□ 1.35
HPS3-204ENST00000462030 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
HPS3-204ENST00000462030 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
HPS3-204ENST00000462030 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
HPS3-204ENST00000462030 MYH16Q9H6N6 1097 aa23.46■■□□□ 1.35
HPS3-204ENST00000462030 EIF5BO60841 1220 aaKnown RBP23.45■■□□□ 1.35
HPS3-204ENST00000462030 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
HPS3-204ENST00000462030 PPLO60437 1756 aa23.44■■□□□ 1.34
HPS3-204ENST00000462030 CFAP65Q6ZU64 1925 aaKnown RBP23.44■■□□□ 1.34
HPS3-204ENST00000462030 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
HPS3-204ENST00000462030 U2AF1L5P0DN76 240 aaPredicted RBP23.43■■□□□ 1.34
HPS3-204ENST00000462030 U2AF1Q01081 240 aaKnown RBP eCLIP23.43■■□□□ 1.34
HPS3-204ENST00000462030 FTSJ3Q8IY81 847 aaKnown RBP23.43■■□□□ 1.34
HPS3-204ENST00000462030 L1TD1Q5T7N2 865 aaKnown RBP23.43■■□□□ 1.34
HPS3-204ENST00000462030 DZIP1LQ8IYY4 767 aaKnown RBP23.43■■□□□ 1.34
HPS3-204ENST00000462030 TSR2Q969E8 191 aaKnown RBP23.43■■□□□ 1.34
HPS3-204ENST00000462030 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
HPS3-204ENST00000462030 ADGRB2O60241 1585 aa23.43■■□□□ 1.34
HPS3-204ENST00000462030 ARXQ96QS3 562 aa23.42■■□□□ 1.34
HPS3-204ENST00000462030 MFAP1P55081 439 aaKnown RBP23.41■■□□□ 1.34
HPS3-204ENST00000462030 RRAGDQ9NQL2 400 aaPredicted RBP23.41■■□□□ 1.34
HPS3-204ENST00000462030 KIDINS220Q9ULH0 1771 aa23.4■■□□□ 1.34
HPS3-204ENST00000462030 C22orf23Q9BZE7 217 aa23.4■■□□□ 1.34
HPS3-204ENST00000462030 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.34
HPS3-204ENST00000462030 MCM4P33991 863 aa23.38■■□□□ 1.33
HPS3-204ENST00000462030 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
HPS3-204ENST00000462030 SMC4Q9NTJ3 1288 aa23.38■■□□□ 1.33
HPS3-204ENST00000462030 TRIM27P14373 513 aa23.37■■□□□ 1.33
HPS3-204ENST00000462030 EXOSC9Q06265 439 aaKnown RBP23.37■■□□□ 1.33
HPS3-204ENST00000462030 TULP4Q9NRJ4 1543 aa23.36■■□□□ 1.33
HPS3-204ENST00000462030 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
HPS3-204ENST00000462030 GZF1Q9H116 711 aaPredicted RBP23.36■■□□□ 1.33
HPS3-204ENST00000462030 ANKRD36BQ8N2N9 1353 aa23.35■■□□□ 1.33
HPS3-204ENST00000462030 XRCC6P12956 609 aaKnown RBP eCLIP23.35■■□□□ 1.33
HPS3-204ENST00000462030 NPATQ14207 1427 aa23.35■■□□□ 1.33
HPS3-204ENST00000462030 CD109Q6YHK3 1445 aa23.35■■□□□ 1.33
HPS3-204ENST00000462030 ITPRIPQ8IWB1 547 aa23.34■■□□□ 1.33
HPS3-204ENST00000462030 SSH1Q8WYL5 1049 aa23.34■■□□□ 1.33
HPS3-204ENST00000462030 GLI2P10070 1586 aa23.34■■□□□ 1.33
HPS3-204ENST00000462030 HDAC1Q13547 482 aaPredicted RBP23.34■■□□□ 1.33
HPS3-204ENST00000462030 FSD2A1L4K1 749 aa23.33■■□□□ 1.33
HPS3-204ENST00000462030 GOLGA6L3A6NEY3 463 aa23.33■■□□□ 1.33
HPS3-204ENST00000462030 CHMP5Q9NZZ3 219 aa23.33■■□□□ 1.33
HPS3-204ENST00000462030 NSD2O96028 1365 aa23.33■■□□□ 1.33
HPS3-204ENST00000462030 CT47B1P0C2W7 299 aaPredicted RBP23.33■■□□□ 1.32
HPS3-204ENST00000462030 ARHGEF28Q8N1W1 1705 aaKnown RBP23.32■■□□□ 1.32
HPS3-204ENST00000462030 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
HPS3-204ENST00000462030 PANK2Q9BZ23 570 aa23.31■■□□□ 1.32
HPS3-204ENST00000462030 CABP2Q9NPB3 220 aa23.31■■□□□ 1.32
HPS3-204ENST00000462030 DDX19BQ9UMR2 479 aa23.31■■□□□ 1.32
HPS3-204ENST00000462030 TRIM35Q9UPQ4 493 aa23.31■■□□□ 1.32
HPS3-204ENST00000462030 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
HPS3-204ENST00000462030 NUTM2DQ5VT03 806 aaPredicted RBP23.31■■□□□ 1.32
HPS3-204ENST00000462030 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
HPS3-204ENST00000462030 TMPOP42166 694 aaKnown RBP23.3■■□□□ 1.32
HPS3-204ENST00000462030 ATF7IPQ6VMQ6 1270 aa23.3■■□□□ 1.32
HPS3-204ENST00000462030 NOB1Q9ULX3 412 aaKnown RBP23.3■■□□□ 1.32
HPS3-204ENST00000462030 SMC5Q8IY18 1101 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms