RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
GABRE-204ENST00000462018 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
GABRE-204ENST00000462018 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
GABRE-204ENST00000462018 SOS2Q07890 1332 aaPredicted RBP12.92□□□□□ -0.34
GABRE-204ENST00000462018 SLIT2O94813 1529 aa12.92□□□□□ -0.34
GABRE-204ENST00000462018 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
GABRE-204ENST00000462018 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
GABRE-204ENST00000462018 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
GABRE-204ENST00000462018 AMOTL2Q9Y2J4 779 aa12.91□□□□□ -0.34
GABRE-204ENST00000462018 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
GABRE-204ENST00000462018 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
GABRE-204ENST00000462018 RSPH4AQ5TD94 716 aa12.9□□□□□ -0.34
GABRE-204ENST00000462018 KRT27Q7Z3Y8 459 aa12.9□□□□□ -0.34
GABRE-204ENST00000462018 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
GABRE-204ENST00000462018 TSPY4P0CV99 314 aa12.89□□□□□ -0.35
GABRE-204ENST00000462018 TSPY10P0CW01 314 aa12.89□□□□□ -0.35
GABRE-204ENST00000462018 UNC5CLQ8IV45 518 aa12.89□□□□□ -0.35
GABRE-204ENST00000462018 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
GABRE-204ENST00000462018 LMTK2Q8IWU2 1503 aa12.88□□□□□ -0.35
GABRE-204ENST00000462018 CHD4Q14839 1912 aa12.88□□□□□ -0.35
GABRE-204ENST00000462018 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
GABRE-204ENST00000462018 RREB1Q92766 1687 aa12.87□□□□□ -0.35
GABRE-204ENST00000462018 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
GABRE-204ENST00000462018 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
GABRE-204ENST00000462018 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
GABRE-204ENST00000462018 NRXN3Q9Y4C0 1643 aa12.85□□□□□ -0.35
GABRE-204ENST00000462018 USP32Q8NFA0 1604 aa12.84□□□□□ -0.35
GABRE-204ENST00000462018 APLP2Q06481 763 aa12.84□□□□□ -0.35
GABRE-204ENST00000462018 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
GABRE-204ENST00000462018 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
GABRE-204ENST00000462018 NRKQ7Z2Y5 1582 aa12.84□□□□□ -0.35
GABRE-204ENST00000462018 ERBINQ96RT1 1412 aa12.83□□□□□ -0.36
GABRE-204ENST00000462018 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
GABRE-204ENST00000462018 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
GABRE-204ENST00000462018 RPRD2Q5VT52 1461 aaKnown RBP12.83□□□□□ -0.36
GABRE-204ENST00000462018 PXDNQ92626 1479 aa12.83□□□□□ -0.36
GABRE-204ENST00000462018 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
GABRE-204ENST00000462018 MYOM1P52179 1685 aa12.82□□□□□ -0.36
GABRE-204ENST00000462018 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
GABRE-204ENST00000462018 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
GABRE-204ENST00000462018 SLC52A1Q9NWF4 448 aa12.81□□□□□ -0.36
GABRE-204ENST00000462018 KANK1Q14678 1352 aa12.81□□□□□ -0.36
GABRE-204ENST00000462018 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
GABRE-204ENST00000462018 NWD2Q9ULI1 1742 aa12.8□□□□□ -0.36
GABRE-204ENST00000462018 A0A0G2JS52 829 aa12.8□□□□□ -0.36
GABRE-204ENST00000462018 MYT1Q01538 1121 aa12.8□□□□□ -0.36
GABRE-204ENST00000462018 VPS72Q15906 364 aa12.8□□□□□ -0.36
GABRE-204ENST00000462018 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
GABRE-204ENST00000462018 KCNQ2O43526 872 aa12.79□□□□□ -0.36
GABRE-204ENST00000462018 SLC34A2O95436 690 aa12.79□□□□□ -0.36
GABRE-204ENST00000462018 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
GABRE-204ENST00000462018 CROCC2H7BZ55 1655 aa12.77□□□□□ -0.36
GABRE-204ENST00000462018 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
GABRE-204ENST00000462018 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
GABRE-204ENST00000462018 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
GABRE-204ENST00000462018 ADGRL2O95490 1459 aa12.77□□□□□ -0.37
GABRE-204ENST00000462018 NRAPQ86VF7 1730 aa12.76□□□□□ -0.37
GABRE-204ENST00000462018 CAPN15O75808 1086 aa12.76□□□□□ -0.37
GABRE-204ENST00000462018 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
GABRE-204ENST00000462018 METP08581 1390 aa12.76□□□□□ -0.37
GABRE-204ENST00000462018 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
GABRE-204ENST00000462018 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
GABRE-204ENST00000462018 ABCA3Q99758 1704 aa12.74□□□□□ -0.37
GABRE-204ENST00000462018 THSD7AQ9UPZ6 1657 aa12.74□□□□□ -0.37
GABRE-204ENST00000462018 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
GABRE-204ENST00000462018 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
GABRE-204ENST00000462018 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
GABRE-204ENST00000462018 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
GABRE-204ENST00000462018 NPHP3Q7Z494 1330 aa12.72□□□□□ -0.37
GABRE-204ENST00000462018 RRP7BPQ9NSQ0 103 aa12.72□□□□□ -0.37
GABRE-204ENST00000462018 TRIM37O94972 964 aa12.71□□□□□ -0.37
GABRE-204ENST00000462018 APBA3O96018 575 aa12.69□□□□□ -0.38
GABRE-204ENST00000462018 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
GABRE-204ENST00000462018 FKBP8Q14318 412 aa12.68□□□□□ -0.38
GABRE-204ENST00000462018 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
GABRE-204ENST00000462018 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
GABRE-204ENST00000462018 FOXO3O43524 673 aa12.67□□□□□ -0.38
GABRE-204ENST00000462018 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
GABRE-204ENST00000462018 IQGAP3Q86VI3 1631 aa12.66□□□□□ -0.38
GABRE-204ENST00000462018 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
GABRE-204ENST00000462018 ROBO2Q9HCK4 1378 aa12.66□□□□□ -0.38
GABRE-204ENST00000462018 ESCO1Q5FWF5 840 aa12.65□□□□□ -0.38
GABRE-204ENST00000462018 FHDC1Q9C0D6 1143 aaPredicted RBP12.65□□□□□ -0.38
GABRE-204ENST00000462018 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 ABCC5O15440 1437 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 MYOM3Q5VTT5 1437 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 NEXMIFQ5QGS0 1516 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 PTGER2P43116 358 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
GABRE-204ENST00000462018 HSPA6P17066 643 aa12.63□□□□□ -0.39
GABRE-204ENST00000462018 E9PCH4 1651 aa12.63□□□□□ -0.39
GABRE-204ENST00000462018 ZBTB7AO95365 584 aa12.62□□□□□ -0.39
GABRE-204ENST00000462018 ANO8Q9HCE9 1232 aaPredicted RBP12.62□□□□□ -0.39
GABRE-204ENST00000462018 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
GABRE-204ENST00000462018 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
GABRE-204ENST00000462018 GOLGB1Q14789 3259 aaKnown RBP12.6□□□□□ -0.39
GABRE-204ENST00000462018 PRELPP51888 382 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms