RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 RRBP1Q9P2E9 1410 aaKnown RBP8.28□□□□□ -1.08
CLK1-207ENST00000461981 DLC1Q96QB1 1528 aa8.28□□□□□ -1.08
CLK1-207ENST00000461981 PIP4K2BP78356 416 aa8.27□□□□□ -1.09
CLK1-207ENST00000461981 NBR1Q14596 966 aa8.27□□□□□ -1.09
CLK1-207ENST00000461981 FMN2Q9NZ56 1722 aa8.27□□□□□ -1.09
CLK1-207ENST00000461981 STAG3Q9UJ98 1225 aa8.27□□□□□ -1.09
CLK1-207ENST00000461981 CFAP65Q6ZU64 1925 aaKnown RBP8.27□□□□□ -1.09
CLK1-207ENST00000461981 ATRNO75882 1429 aa8.26□□□□□ -1.09
CLK1-207ENST00000461981 LRPPRCP42704 1394 aaKnown RBP8.26□□□□□ -1.09
CLK1-207ENST00000461981 ITGAEP38570 1179 aa8.26□□□□□ -1.09
CLK1-207ENST00000461981 PTPRUQ92729 1446 aa8.25□□□□□ -1.09
CLK1-207ENST00000461981 KANK4Q5T7N3 995 aaPredicted RBP8.25□□□□□ -1.09
CLK1-207ENST00000461981 PNPLA6Q8IY17 1366 aa8.25□□□□□ -1.09
CLK1-207ENST00000461981 MYOM2P54296 1465 aa8.25□□□□□ -1.09
CLK1-207ENST00000461981 ATAD2Q6PL18 1390 aa8.24□□□□□ -1.09
CLK1-207ENST00000461981 STAC3Q96MF2 364 aa8.24□□□□□ -1.09
CLK1-207ENST00000461981 NRXN1Q9ULB1 1477 aa8.24□□□□□ -1.09
CLK1-207ENST00000461981 A0A0U1RQG5 324 aaPredicted RBP8.24□□□□□ -1.09
CLK1-207ENST00000461981 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
CLK1-207ENST00000461981 LRRC59Q96AG4 307 aaKnown RBP8.24□□□□□ -1.09
CLK1-207ENST00000461981 C1orf167Q5SNV9 1468 aa8.23□□□□□ -1.09
CLK1-207ENST00000461981 EIF3AQ14152 1382 aaKnown RBP8.23□□□□□ -1.09
CLK1-207ENST00000461981 ATF3P18847 181 aa8.23□□□□□ -1.09
CLK1-207ENST00000461981 FKBP8Q14318 412 aa8.23□□□□□ -1.09
CLK1-207ENST00000461981 SOS2Q07890 1332 aaPredicted RBP8.23□□□□□ -1.09
CLK1-207ENST00000461981 ANKARQ7Z5J8 1434 aa8.22□□□□□ -1.09
CLK1-207ENST00000461981 RRP7BPQ9NSQ0 103 aa8.22□□□□□ -1.09
CLK1-207ENST00000461981 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
CLK1-207ENST00000461981 TIMELESSQ9UNS1 1208 aa8.22□□□□□ -1.09
CLK1-207ENST00000461981 POTEAQ6S8J7 498 aa8.22□□□□□ -1.09
CLK1-207ENST00000461981 ABCA3Q99758 1704 aa8.22□□□□□ -1.09
CLK1-207ENST00000461981 RGPD3A6NKT7 1758 aaPredicted RBP8.22□□□□□ -1.09
CLK1-207ENST00000461981 RGPD4Q7Z3J3 1758 aa8.22□□□□□ -1.09
CLK1-207ENST00000461981 PXDNQ92626 1479 aa8.21□□□□□ -1.09
CLK1-207ENST00000461981 RBM6P78332 1123 aaKnown RBP8.21□□□□□ -1.09
CLK1-207ENST00000461981 RGPD1P0DJD0 1748 aa8.21□□□□□ -1.1
CLK1-207ENST00000461981 NGLY1Q96IV0 654 aa8.2□□□□□ -1.1
CLK1-207ENST00000461981 UPF1Q92900 1129 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLK1-207ENST00000461981 SBNO1A3KN83 1393 aa8.2□□□□□ -1.1
CLK1-207ENST00000461981 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
CLK1-207ENST00000461981 VGFO15240 615 aaPredicted RBP8.19□□□□□ -1.1
CLK1-207ENST00000461981 BRD4O60885 1362 aaPredicted RBP8.19□□□□□ -1.1
CLK1-207ENST00000461981 RXRBP28702 533 aa8.19□□□□□ -1.1
CLK1-207ENST00000461981 BRINP3Q76B58 766 aa8.19□□□□□ -1.1
CLK1-207ENST00000461981 ABCC11Q96J66 1382 aa8.19□□□□□ -1.1
CLK1-207ENST00000461981 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
CLK1-207ENST00000461981 ITSN1Q15811 1721 aa8.19□□□□□ -1.1
CLK1-207ENST00000461981 CCDC144AA2RUR9 1427 aa8.19□□□□□ -1.1
CLK1-207ENST00000461981 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
CLK1-207ENST00000461981 DISP2A7MBM2 1401 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 RGS12O14924 1447 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 NRAPQ86VF7 1730 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 FANCIQ9NVI1 1328 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 NEFLP07196 543 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 USP32Q8NFA0 1604 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 COL14A1Q05707 1796 aaKnown RBP8.18□□□□□ -1.1
CLK1-207ENST00000461981 CRYBG1Q9Y4K1 1723 aa8.18□□□□□ -1.1
CLK1-207ENST00000461981 NUP155O75694 1391 aa8.17□□□□□ -1.1
CLK1-207ENST00000461981 EHMT2Q96KQ7 1210 aa8.17□□□□□ -1.1
CLK1-207ENST00000461981 AMOTL2Q9Y2J4 779 aa8.17□□□□□ -1.1
CLK1-207ENST00000461981 SLIT2O94813 1529 aa8.17□□□□□ -1.1
CLK1-207ENST00000461981 NAIPQ13075 1403 aa8.17□□□□□ -1.1
CLK1-207ENST00000461981 C11orf95C9JLR9 678 aaPredicted RBP8.16□□□□□ -1.1
CLK1-207ENST00000461981 SPATA31E1Q6ZUB1 1445 aa8.16□□□□□ -1.1
CLK1-207ENST00000461981 TRPM3Q9HCF6 1732 aaPredicted RBP8.16□□□□□ -1.1
CLK1-207ENST00000461981 PLCH1Q4KWH8 1693 aa8.16□□□□□ -1.1
CLK1-207ENST00000461981 NPHP3Q7Z494 1330 aa8.16□□□□□ -1.1
CLK1-207ENST00000461981 TRPC5Q9UL62 973 aaPredicted RBP8.16□□□□□ -1.1
CLK1-207ENST00000461981 ABCC6O95255 1503 aa8.16□□□□□ -1.1
CLK1-207ENST00000461981 PDE4CQ08493 712 aa8.15□□□□□ -1.1
CLK1-207ENST00000461981 PARD3Q8TEW0 1356 aa8.15□□□□□ -1.1
CLK1-207ENST00000461981 ALS2Q96Q42 1657 aa8.15□□□□□ -1.1
CLK1-207ENST00000461981 PIK3C2GO75747 1445 aa8.14□□□□□ -1.11
CLK1-207ENST00000461981 THSD7AQ9UPZ6 1657 aa8.14□□□□□ -1.11
CLK1-207ENST00000461981 ATP7BP35670 1465 aa8.14□□□□□ -1.11
CLK1-207ENST00000461981 ARHGEF10O15013 1369 aa8.14□□□□□ -1.11
CLK1-207ENST00000461981 MEX3CQ5U5Q3 659 aaKnown RBP8.14□□□□□ -1.11
CLK1-207ENST00000461981 SLC26A8Q96RN1 970 aa8.14□□□□□ -1.11
CLK1-207ENST00000461981 BLMP54132 1417 aaPredicted RBP8.14□□□□□ -1.11
CLK1-207ENST00000461981 AFF2P51816 1311 aa8.13□□□□□ -1.11
CLK1-207ENST00000461981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.13□□□□□ -1.111e-8■□□□□ 11.2
CLK1-207ENST00000461981 RALGAPBQ86X10 1494 aa8.13□□□□□ -1.11
CLK1-207ENST00000461981 METP08581 1390 aa8.13□□□□□ -1.11
CLK1-207ENST00000461981 GLIPR1L2Q4G1C9 344 aa8.13□□□□□ -1.11
CLK1-207ENST00000461981 GLI3P10071 1580 aa8.12□□□□□ -1.11
CLK1-207ENST00000461981 RTL5Q5HYW3 569 aaPredicted RBP8.12□□□□□ -1.11
CLK1-207ENST00000461981 TNS3Q68CZ2 1445 aa8.11□□□□□ -1.11
CLK1-207ENST00000461981 TOPAZ1Q8N9V7 1692 aa8.11□□□□□ -1.11
CLK1-207ENST00000461981 RREB1Q92766 1687 aa8.11□□□□□ -1.11
CLK1-207ENST00000461981 ONECUT3O60422 494 aaPredicted RBP8.11□□□□□ -1.11
CLK1-207ENST00000461981 USP54Q70EL1 1684 aa8.11□□□□□ -1.11
CLK1-207ENST00000461981 PDIA4P13667 645 aaKnown RBP8.1□□□□□ -1.11
CLK1-207ENST00000461981 TULP4Q9NRJ4 1543 aa8.1□□□□□ -1.11
CLK1-207ENST00000461981 BCL9LQ86UU0 1499 aa8.09□□□□□ -1.11
CLK1-207ENST00000461981 TNS1Q9HBL0 1735 aaKnown RBP8.09□□□□□ -1.11
CLK1-207ENST00000461981 BCL11BQ9C0K0 894 aaPredicted RBP8.09□□□□□ -1.11
CLK1-207ENST00000461981 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
CLK1-207ENST00000461981 PSME1Q06323 249 aa8.08□□□□□ -1.12
CLK1-207ENST00000461981 FGD1P98174 961 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms