RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.02
TMEM39A-203ENST00000461654 RGS17Q9UGC6 210 aaPredicted RBP21.44■■□□□ 1.02
TMEM39A-203ENST00000461654 ASXL1Q8IXJ9 1541 aa21.44■■□□□ 1.02
TMEM39A-203ENST00000461654 SIRT1Q96EB6 747 aa21.43■■□□□ 1.02
TMEM39A-203ENST00000461654 SPATA31A6Q5VVP1 1343 aa21.43■■□□□ 1.02
TMEM39A-203ENST00000461654 MYOM2P54296 1465 aa21.43■■□□□ 1.02
TMEM39A-203ENST00000461654 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
TMEM39A-203ENST00000461654 TMEM132EQ6IEE7 984 aa21.4■■□□□ 1.02
TMEM39A-203ENST00000461654 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.02
TMEM39A-203ENST00000461654 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.01
TMEM39A-203ENST00000461654 STK26Q9P289 416 aa21.38■■□□□ 1.01
TMEM39A-203ENST00000461654 YTHDC2Q9H6S0 1430 aaKnown RBP21.38■■□□□ 1.01
TMEM39A-203ENST00000461654 LRRC59Q96AG4 307 aaKnown RBP21.37■■□□□ 1.01
TMEM39A-203ENST00000461654 NHSL1Q5SYE7 1610 aa21.37■■□□□ 1.01
TMEM39A-203ENST00000461654 ROCK2O75116 1388 aaKnown RBP21.36■■□□□ 1.01
TMEM39A-203ENST00000461654 CFAP70Q5T0N1 1121 aa21.36■■□□□ 1.01
TMEM39A-203ENST00000461654 WAPLQ7Z5K2 1190 aa21.36■■□□□ 1.01
TMEM39A-203ENST00000461654 KNDC1Q76NI1 1749 aa21.35■■□□□ 1.01
TMEM39A-203ENST00000461654 SHPRHQ149N8 1683 aa21.35■■□□□ 1.01
TMEM39A-203ENST00000461654 CARD11Q9BXL7 1154 aa21.35■■□□□ 1.01
TMEM39A-203ENST00000461654 CDC42BPGQ6DT37 1551 aa21.35■■□□□ 1.01
TMEM39A-203ENST00000461654 LAMC1P11047 1609 aa21.34■■□□□ 1.01
TMEM39A-203ENST00000461654 ORAI2Q96SN7 254 aa21.34■■□□□ 1.01
TMEM39A-203ENST00000461654 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
TMEM39A-203ENST00000461654 SOS2Q07890 1332 aaPredicted RBP21.31■■□□□ 1
TMEM39A-203ENST00000461654 LRP6O75581 1613 aa21.31■■□□□ 1
TMEM39A-203ENST00000461654 PLEKHH1Q9ULM0 1364 aa21.31■■□□□ 1
TMEM39A-203ENST00000461654 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
TMEM39A-203ENST00000461654 POTEAQ6S8J7 498 aa21.3■■□□□ 1
TMEM39A-203ENST00000461654 DDX17Q92841 729 aaKnown RBP21.3■■□□□ 1
TMEM39A-203ENST00000461654 GPRASP1Q5JY77 1395 aa21.28■■□□□ 1
TMEM39A-203ENST00000461654 USP47Q96K76 1375 aa21.27■■□□□ 1
TMEM39A-203ENST00000461654 NBPF1Q3BBV0 1214 aa21.27■■□□□ 1
TMEM39A-203ENST00000461654 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
TMEM39A-203ENST00000461654 PNPLA6Q8IY17 1366 aa21.26■□□□□ 0.99
TMEM39A-203ENST00000461654 DLC1Q96QB1 1528 aa21.26■□□□□ 0.99
TMEM39A-203ENST00000461654 ADGRB1O14514 1584 aa21.26■□□□□ 0.99
TMEM39A-203ENST00000461654 KIAA1210Q9ULL0 1709 aa21.26■□□□□ 0.99
TMEM39A-203ENST00000461654 MEX3CQ5U5Q3 659 aaKnown RBP21.25■□□□□ 0.99
TMEM39A-203ENST00000461654 NPHP3Q7Z494 1330 aa21.25■□□□□ 0.99
TMEM39A-203ENST00000461654 ZNF772Q68DY9 489 aaPredicted RBP21.24■□□□□ 0.99
TMEM39A-203ENST00000461654 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
TMEM39A-203ENST00000461654 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
TMEM39A-203ENST00000461654 NUTM2BA6NNL0 878 aaPredicted RBP21.22■□□□□ 0.99
TMEM39A-203ENST00000461654 NUTM2EB1AL46 878 aaPredicted RBP21.22■□□□□ 0.99
TMEM39A-203ENST00000461654 NUTM2AQ8IVF1 878 aaPredicted RBP21.22■□□□□ 0.99
TMEM39A-203ENST00000461654 FOXO3O43524 673 aa21.21■□□□□ 0.99
TMEM39A-203ENST00000461654 POGKQ9P215 609 aa21.2■□□□□ 0.98
TMEM39A-203ENST00000461654 FMN2Q9NZ56 1722 aa21.2■□□□□ 0.98
TMEM39A-203ENST00000461654 NUTM2FA1L443 756 aa21.19■□□□□ 0.98
TMEM39A-203ENST00000461654 EIF3AQ14152 1382 aaKnown RBP21.19■□□□□ 0.98
TMEM39A-203ENST00000461654 PXDNQ92626 1479 aa21.19■□□□□ 0.98
TMEM39A-203ENST00000461654 TRAK1Q9UPV9 953 aa21.18■□□□□ 0.98
TMEM39A-203ENST00000461654 ST20-MTHFSA0A0A6YYL1 179 aa21.15■□□□□ 0.98
TMEM39A-203ENST00000461654 SAFB2Q14151 953 aaKnown RBP eCLIP21.15■□□□□ 0.98
TMEM39A-203ENST00000461654 KIF1AQ12756 1690 aa21.14■□□□□ 0.97
TMEM39A-203ENST00000461654 COL22A1Q8NFW1 1626 aaPredicted RBP21.14■□□□□ 0.97
TMEM39A-203ENST00000461654 ADGRB2O60241 1585 aa21.14■□□□□ 0.97
TMEM39A-203ENST00000461654 ANKARQ7Z5J8 1434 aa21.13■□□□□ 0.97
TMEM39A-203ENST00000461654 AFF2P51816 1311 aa21.13■□□□□ 0.97
TMEM39A-203ENST00000461654 PHF8Q9UPP1 1060 aa21.13■□□□□ 0.97
TMEM39A-203ENST00000461654 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
TMEM39A-203ENST00000461654 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
TMEM39A-203ENST00000461654 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
TMEM39A-203ENST00000461654 KRT28Q7Z3Y7 464 aa21.11■□□□□ 0.97
TMEM39A-203ENST00000461654 C8orf37Q96NL8 207 aa21.11■□□□□ 0.97
TMEM39A-203ENST00000461654 SPATA31A3Q5VYP0 1347 aa21.1■□□□□ 0.97
TMEM39A-203ENST00000461654 ADAMTS2O95450 1211 aa21.1■□□□□ 0.97
TMEM39A-203ENST00000461654 RXRBP28702 533 aa21.1■□□□□ 0.97
TMEM39A-203ENST00000461654 WASLO00401 505 aaPredicted RBP21.09■□□□□ 0.97
TMEM39A-203ENST00000461654 PSME1Q06323 249 aa21.09■□□□□ 0.97
TMEM39A-203ENST00000461654 NGLY1Q96IV0 654 aa21.09■□□□□ 0.97
TMEM39A-203ENST00000461654 FNBP4Q8N3X1 1017 aaPredicted RBP21.08■□□□□ 0.97
TMEM39A-203ENST00000461654 MINK1Q8N4C8 1332 aaPredicted RBP21.07■□□□□ 0.96
TMEM39A-203ENST00000461654 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
TMEM39A-203ENST00000461654 RGPD8O14715 1765 aaPredicted RBP21.06■□□□□ 0.96
TMEM39A-203ENST00000461654 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
TMEM39A-203ENST00000461654 USP32Q8NFA0 1604 aa21.06■□□□□ 0.96
TMEM39A-203ENST00000461654 SBNO1A3KN83 1393 aa21.06■□□□□ 0.96
TMEM39A-203ENST00000461654 TMF1P82094 1093 aa21.05■□□□□ 0.96
TMEM39A-203ENST00000461654 CCDC7Q96M83 1385 aa21.05■□□□□ 0.96
TMEM39A-203ENST00000461654 WASHC2AQ641Q2 1341 aa21.04■□□□□ 0.96
TMEM39A-203ENST00000461654 RBM6P78332 1123 aaKnown RBP21.04■□□□□ 0.96
TMEM39A-203ENST00000461654 ARHGEF28Q8N1W1 1705 aaKnown RBP21.04■□□□□ 0.96
TMEM39A-203ENST00000461654 TULP4Q9NRJ4 1543 aa21.04■□□□□ 0.96
TMEM39A-203ENST00000461654 PRR36Q9H6K5 1346 aa21.04■□□□□ 0.96
TMEM39A-203ENST00000461654 CENPJQ9HC77 1338 aaPredicted RBP21.04■□□□□ 0.96
TMEM39A-203ENST00000461654 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
TMEM39A-203ENST00000461654 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
TMEM39A-203ENST00000461654 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
TMEM39A-203ENST00000461654 PMFBP1Q8TBY8 1022 aa21.02■□□□□ 0.96
TMEM39A-203ENST00000461654 TESK2Q96S53 571 aa21.02■□□□□ 0.96
TMEM39A-203ENST00000461654 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
TMEM39A-203ENST00000461654 USP21Q9UK80 565 aa21.02■□□□□ 0.96
TMEM39A-203ENST00000461654 TNS3Q68CZ2 1445 aa21.02■□□□□ 0.96
TMEM39A-203ENST00000461654 C11orf95C9JLR9 678 aaPredicted RBP21■□□□□ 0.95
TMEM39A-203ENST00000461654 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
TMEM39A-203ENST00000461654 ARHGEF10O15013 1369 aa20.98■□□□□ 0.95
TMEM39A-203ENST00000461654 SBNO2Q9Y2G9 1366 aa20.98■□□□□ 0.95
TMEM39A-203ENST00000461654 NUDT16Q96DE0 195 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms