RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PRR20DP86480 221 aa6□□□□□ -1.45
VCL-203ENST00000461383 PRR20BP86481 221 aa6□□□□□ -1.45
VCL-203ENST00000461383 PRR20AP86496 221 aa6□□□□□ -1.45
VCL-203ENST00000461383 MYSM1Q5VVJ2 828 aa6□□□□□ -1.45
VCL-203ENST00000461383 TRIM67Q6ZTA4 783 aa6□□□□□ -1.45
VCL-203ENST00000461383 NUTM1Q86Y26 1132 aa6□□□□□ -1.45
VCL-203ENST00000461383 TBC1D2Q9BYX2 928 aa6□□□□□ -1.45
VCL-203ENST00000461383 PDZRN3Q9UPQ7 1066 aa6□□□□□ -1.45
VCL-203ENST00000461383 DDX11L8A8MPP1 907 aa5.99□□□□□ -1.45
VCL-203ENST00000461383 NR1I2O75469 434 aa5.99□□□□□ -1.45
VCL-203ENST00000461383 PROCA1Q8NCQ7 364 aaPredicted RBP5.99□□□□□ -1.45
VCL-203ENST00000461383 ARID3AQ99856 593 aa5.99□□□□□ -1.45
VCL-203ENST00000461383 SPRYD7Q5W111 196 aa5.98□□□□□ -1.45
VCL-203ENST00000461383 ZNF598Q86UK7 904 aaKnown RBP5.98□□□□□ -1.45
VCL-203ENST00000461383 RAD21O60216 631 aa5.97□□□□□ -1.45
VCL-203ENST00000461383 S1PR4O95977 384 aa5.97□□□□□ -1.45
VCL-203ENST00000461383 SLC19A1P41440 591 aa5.97□□□□□ -1.45
VCL-203ENST00000461383 RDH13Q8NBN7 331 aa5.97□□□□□ -1.45
VCL-203ENST00000461383 CD46P15529 392 aa5.96□□□□□ -1.46
VCL-203ENST00000461383 MCM6Q14566 821 aa5.96□□□□□ -1.46
VCL-203ENST00000461383 RSPH4AQ5TD94 716 aa5.96□□□□□ -1.46
VCL-203ENST00000461383 SPIRE2Q8WWL2 714 aa5.96□□□□□ -1.46
VCL-203ENST00000461383 CLUAP1Q96AJ1 413 aa5.96□□□□□ -1.46
VCL-203ENST00000461383 ARID3CA6NKF2 412 aa5.95□□□□□ -1.46
VCL-203ENST00000461383 APBB1O00213 710 aa5.95□□□□□ -1.46
VCL-203ENST00000461383 CSPP1Q1MSJ5 1256 aa5.95□□□□□ -1.46
VCL-203ENST00000461383 LIAT1Q6ZQX7 453 aa5.95□□□□□ -1.46
VCL-203ENST00000461383 RIC3Q7Z5B4 369 aa5.95□□□□□ -1.46
VCL-203ENST00000461383 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.95□□□□□ -1.46
VCL-203ENST00000461383 SLC6A16Q9GZN6 736 aa5.95□□□□□ -1.46
VCL-203ENST00000461383 A6NJR5 290 aa5.94□□□□□ -1.46
VCL-203ENST00000461383 GDF9O60383 454 aa5.94□□□□□ -1.46
VCL-203ENST00000461383 SCUBE3Q8IX30 993 aa5.94□□□□□ -1.46
VCL-203ENST00000461383 DGAT1O75907 488 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 RFC5P40937 340 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 TMEM259Q4ZIN3 620 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 PLA2G2CQ5R387 149 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 MORN1Q5T089 497 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 ZNF697Q5TEC3 545 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 THAP11Q96EK4 314 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 LIMD1Q9UGP4 676 aa5.93□□□□□ -1.46
VCL-203ENST00000461383 SALL2Q9Y467 1007 aaPredicted RBP5.93□□□□□ -1.46
VCL-203ENST00000461383 SPDYE5A6NIY4 337 aa5.92□□□□□ -1.46
VCL-203ENST00000461383 NUTM2BA6NNL0 878 aaPredicted RBP5.92□□□□□ -1.46
VCL-203ENST00000461383 NUTM2EB1AL46 878 aaPredicted RBP5.92□□□□□ -1.46
VCL-203ENST00000461383 PPEF1O14829 653 aaPredicted RBP5.92□□□□□ -1.46
VCL-203ENST00000461383 TRAK2O60296 914 aa5.92□□□□□ -1.46
VCL-203ENST00000461383 NUTM2DQ5VT03 806 aaPredicted RBP5.92□□□□□ -1.46
VCL-203ENST00000461383 NUTM2AQ8IVF1 878 aaPredicted RBP5.92□□□□□ -1.46
VCL-203ENST00000461383 BANK1Q8NDB2 785 aa5.92□□□□□ -1.46
VCL-203ENST00000461383 SPSB2Q99619 263 aa5.92□□□□□ -1.46
VCL-203ENST00000461383 MOXD2PA6NHM9 499 aa5.91□□□□□ -1.46
VCL-203ENST00000461383 SPTLC1O15269 473 aa5.91□□□□□ -1.46
VCL-203ENST00000461383 KDM4AO75164 1064 aa5.91□□□□□ -1.46
VCL-203ENST00000461383 ATP6V1AP38606 617 aa5.91□□□□□ -1.46
VCL-203ENST00000461383 GCGRP47871 477 aa5.91□□□□□ -1.46
VCL-203ENST00000461383 RPIAP49247 311 aa5.91□□□□□ -1.46
VCL-203ENST00000461383 RSBN1LQ6PCB5 846 aaPredicted RBP5.91□□□□□ -1.46
VCL-203ENST00000461383 PROSER2Q86WR7 435 aaPredicted RBP5.91□□□□□ -1.46
VCL-203ENST00000461383 NDUFV2P19404 249 aa5.9□□□□□ -1.46
VCL-203ENST00000461383 MYT1Q01538 1121 aa5.9□□□□□ -1.46
VCL-203ENST00000461383 FUT2Q10981 343 aa5.9□□□□□ -1.46
VCL-203ENST00000461383 PUS10Q3MIT2 529 aaKnown RBP5.9□□□□□ -1.46
VCL-203ENST00000461383 WWC1Q8IX03 1113 aa5.9□□□□□ -1.46
VCL-203ENST00000461383 PRM3Q9NNZ6 103 aa5.9□□□□□ -1.46
VCL-203ENST00000461383 AP1G2O75843 785 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 USP46P62068 366 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 TUSC1Q2TAM9 212 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 MSS51Q4VC12 460 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 PKDCCQ504Y2 493 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 PPP2R2DQ66LE6 453 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 ZNF787Q6DD87 383 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 POM121Q96HA1 1249 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 C1orf115Q9H7X2 142 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 PKD2L1Q9P0L9 805 aa5.89□□□□□ -1.47
VCL-203ENST00000461383 FMNL1O95466 1100 aaPredicted RBP5.88□□□□□ -1.47
VCL-203ENST00000461383 GJA5P36382 358 aa5.88□□□□□ -1.47
VCL-203ENST00000461383 BRICD5Q6PL45 260 aa5.88□□□□□ -1.47
VCL-203ENST00000461383 CRIPAKQ8N1N5 446 aa5.88□□□□□ -1.47
VCL-203ENST00000461383 SNRKQ9NRH2 765 aa5.88□□□□□ -1.47
VCL-203ENST00000461383 ZNF777Q9ULD5 760 aaPredicted RBP5.88□□□□□ -1.47
VCL-203ENST00000461383 SLC27A5Q9Y2P5 690 aa5.88□□□□□ -1.47
VCL-203ENST00000461383 FDX1P10109 184 aa5.87□□□□□ -1.47
VCL-203ENST00000461383 QPCTQ16769 361 aa5.87□□□□□ -1.47
VCL-203ENST00000461383 GRIPAP1Q4V328 841 aa5.87□□□□□ -1.47
VCL-203ENST00000461383 CCDC82Q8N4S0 544 aa5.87□□□□□ -1.47
VCL-203ENST00000461383 FAM160A2Q8N612 972 aaPredicted RBP5.87□□□□□ -1.47
VCL-203ENST00000461383 CCDC97Q96F63 343 aaPredicted RBP5.87□□□□□ -1.47
VCL-203ENST00000461383 ZBTB3Q9H5J0 574 aa5.87□□□□□ -1.47
VCL-203ENST00000461383 COG6Q9Y2V7 657 aa5.87□□□□□ -1.47
VCL-203ENST00000461383 PCDHB15Q9Y5E8 787 aa5.87□□□□□ -1.47
VCL-203ENST00000461383 HOXA2O43364 376 aa5.86□□□□□ -1.47
VCL-203ENST00000461383 LILRB3O75022 631 aa5.86□□□□□ -1.47
VCL-203ENST00000461383 PRPF38BQ5VTL8 546 aaKnown RBP5.86□□□□□ -1.47
VCL-203ENST00000461383 TSC1Q92574 1164 aa5.86□□□□□ -1.47
VCL-203ENST00000461383 FCF1Q9Y324 198 aaKnown RBP5.86□□□□□ -1.47
VCL-203ENST00000461383 FAM187AA6NFU0 413 aa5.85□□□□□ -1.47
VCL-203ENST00000461383 TNFRSF10AO00220 468 aa5.85□□□□□ -1.47
VCL-203ENST00000461383 AVPP01185 164 aa5.85□□□□□ -1.47
VCL-203ENST00000461383 FBXO31Q5XUX0 539 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms