RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 ONECUT3O60422 494 aaPredicted RBP12.53□□□□□ -0.4
PDGFRA-202ENST00000461294 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
PDGFRA-202ENST00000461294 CHIC2Q9UKJ5 165 aa12.53□□□□□ -0.4
PDGFRA-202ENST00000461294 ADGRL2O95490 1459 aa12.53□□□□□ -0.4
PDGFRA-202ENST00000461294 MYOM2P54296 1465 aa12.53□□□□□ -0.4
PDGFRA-202ENST00000461294 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.4
PDGFRA-202ENST00000461294 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
PDGFRA-202ENST00000461294 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
PDGFRA-202ENST00000461294 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
PDGFRA-202ENST00000461294 RRP7BPQ9NSQ0 103 aa12.51□□□□□ -0.41
PDGFRA-202ENST00000461294 C1orf167Q5SNV9 1468 aa12.51□□□□□ -0.41
PDGFRA-202ENST00000461294 ACIN1Q9UKV3 1341 aaKnown RBP12.5□□□□□ -0.41
PDGFRA-202ENST00000461294 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
PDGFRA-202ENST00000461294 RPRD2Q5VT52 1461 aaKnown RBP12.5□□□□□ -0.41
PDGFRA-202ENST00000461294 XRN1Q8IZH2 1706 aaKnown RBP12.49□□□□□ -0.41
PDGFRA-202ENST00000461294 ORAI2Q96SN7 254 aa12.49□□□□□ -0.41
PDGFRA-202ENST00000461294 SLIT2O94813 1529 aa12.48□□□□□ -0.41
PDGFRA-202ENST00000461294 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
PDGFRA-202ENST00000461294 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.41
PDGFRA-202ENST00000461294 VPS72Q15906 364 aa12.46□□□□□ -0.41
PDGFRA-202ENST00000461294 ANKRD50Q9ULJ7 1429 aa12.45□□□□□ -0.42
PDGFRA-202ENST00000461294 NINLQ9Y2I6 1382 aa12.45□□□□□ -0.42
PDGFRA-202ENST00000461294 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
PDGFRA-202ENST00000461294 RGPD1P0DJD0 1748 aa12.45□□□□□ -0.42
PDGFRA-202ENST00000461294 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
PDGFRA-202ENST00000461294 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
PDGFRA-202ENST00000461294 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
PDGFRA-202ENST00000461294 NAIPQ13075 1403 aa12.44□□□□□ -0.42
PDGFRA-202ENST00000461294 CEP350Q5VT06 3117 aa12.44□□□□□ -0.42
PDGFRA-202ENST00000461294 EZH2Q15910 746 aaKnown RBP12.43□□□□□ -0.42
PDGFRA-202ENST00000461294 CHD4Q14839 1912 aa12.43□□□□□ -0.42
PDGFRA-202ENST00000461294 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
PDGFRA-202ENST00000461294 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
PDGFRA-202ENST00000461294 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
PDGFRA-202ENST00000461294 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
PDGFRA-202ENST00000461294 METP08581 1390 aa12.41□□□□□ -0.42
PDGFRA-202ENST00000461294 KCNQ2O43526 872 aa12.4□□□□□ -0.42
PDGFRA-202ENST00000461294 CAMTA1Q9Y6Y1 1673 aa12.4□□□□□ -0.42
PDGFRA-202ENST00000461294 NRXN3Q9Y4C0 1643 aa12.39□□□□□ -0.43
PDGFRA-202ENST00000461294 PXDNQ92626 1479 aa12.39□□□□□ -0.43
PDGFRA-202ENST00000461294 A0A0G2JS52 829 aa12.38□□□□□ -0.43
PDGFRA-202ENST00000461294 MYT1Q01538 1121 aa12.38□□□□□ -0.43
PDGFRA-202ENST00000461294 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
PDGFRA-202ENST00000461294 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
PDGFRA-202ENST00000461294 FOXO3O43524 673 aa12.37□□□□□ -0.43
PDGFRA-202ENST00000461294 NBPF8Q3BBV2 869 aa12.37□□□□□ -0.43
PDGFRA-202ENST00000461294 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
PDGFRA-202ENST00000461294 NBPF14Q5TI25 921 aa12.37□□□□□ -0.43
PDGFRA-202ENST00000461294 PARD3Q8TEW0 1356 aa12.37□□□□□ -0.43
PDGFRA-202ENST00000461294 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
PDGFRA-202ENST00000461294 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
PDGFRA-202ENST00000461294 FAM182BQ5T319 152 aa12.36□□□□□ -0.43
PDGFRA-202ENST00000461294 UTRNP46939 3433 aa12.36□□□□□ -0.43
PDGFRA-202ENST00000461294 NUP155O75694 1391 aa12.35□□□□□ -0.43
PDGFRA-202ENST00000461294 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
PDGFRA-202ENST00000461294 FAM98CQ17RN3 349 aaKnown RBP12.35□□□□□ -0.43
PDGFRA-202ENST00000461294 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
PDGFRA-202ENST00000461294 LRPPRCP42704 1394 aaKnown RBP12.34□□□□□ -0.43
PDGFRA-202ENST00000461294 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
PDGFRA-202ENST00000461294 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
PDGFRA-202ENST00000461294 ADGRB2O60241 1585 aa12.32□□□□□ -0.44
PDGFRA-202ENST00000461294 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
PDGFRA-202ENST00000461294 APBA3O96018 575 aa12.32□□□□□ -0.44
PDGFRA-202ENST00000461294 TRIM37O94972 964 aa12.31□□□□□ -0.44
PDGFRA-202ENST00000461294 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
PDGFRA-202ENST00000461294 RREB1Q92766 1687 aa12.3□□□□□ -0.44
PDGFRA-202ENST00000461294 FAM196AQ6ZSG2 479 aa12.3□□□□□ -0.44
PDGFRA-202ENST00000461294 ROBO2Q9HCK4 1378 aa12.3□□□□□ -0.44
PDGFRA-202ENST00000461294 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
PDGFRA-202ENST00000461294 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
PDGFRA-202ENST00000461294 FAM83GA6ND36 823 aa12.29□□□□□ -0.44
PDGFRA-202ENST00000461294 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
PDGFRA-202ENST00000461294 MPHOSPH9Q99550 1183 aa12.28□□□□□ -0.44
PDGFRA-202ENST00000461294 E9PCH4 1651 aa12.27□□□□□ -0.45
PDGFRA-202ENST00000461294 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
PDGFRA-202ENST00000461294 ZNF326Q5BKZ1 582 aaKnown RBP12.25□□□□□ -0.45
PDGFRA-202ENST00000461294 KRT28Q7Z3Y7 464 aa12.25□□□□□ -0.45
PDGFRA-202ENST00000461294 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
PDGFRA-202ENST00000461294 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
PDGFRA-202ENST00000461294 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
PDGFRA-202ENST00000461294 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
PDGFRA-202ENST00000461294 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
PDGFRA-202ENST00000461294 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
PDGFRA-202ENST00000461294 THSD7AQ9UPZ6 1657 aa12.23□□□□□ -0.45
PDGFRA-202ENST00000461294 CDC42BPGQ6DT37 1551 aa12.23□□□□□ -0.45
PDGFRA-202ENST00000461294 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
PDGFRA-202ENST00000461294 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
PDGFRA-202ENST00000461294 PTGER2P43116 358 aa12.21□□□□□ -0.45
PDGFRA-202ENST00000461294 PSME1Q06323 249 aa12.21□□□□□ -0.45
PDGFRA-202ENST00000461294 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
PDGFRA-202ENST00000461294 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
PDGFRA-202ENST00000461294 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
PDGFRA-202ENST00000461294 FHDC1Q9C0D6 1143 aaPredicted RBP12.2□□□□□ -0.46
PDGFRA-202ENST00000461294 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
PDGFRA-202ENST00000461294 ABCA3Q99758 1704 aa12.19□□□□□ -0.46
PDGFRA-202ENST00000461294 MYOM1P52179 1685 aa12.19□□□□□ -0.46
PDGFRA-202ENST00000461294 NEXMIFQ5QGS0 1516 aa12.18□□□□□ -0.46
PDGFRA-202ENST00000461294 KIF1AQ12756 1690 aa12.18□□□□□ -0.46
PDGFRA-202ENST00000461294 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
PDGFRA-202ENST00000461294 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms