RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 NUTM2BA6NNL0 878 aaPredicted RBP22.03■■□□□ 1.12
DNMT3A-207ENST00000461228 NUTM2EB1AL46 878 aaPredicted RBP22.03■■□□□ 1.12
DNMT3A-207ENST00000461228 NUTM2AQ8IVF1 878 aaPredicted RBP22.03■■□□□ 1.12
DNMT3A-207ENST00000461228 ANKRD30BQ9BXX2 1392 aa22.01■■□□□ 1.11
DNMT3A-207ENST00000461228 CCDC144AA2RUR9 1427 aa22.01■■□□□ 1.11
DNMT3A-207ENST00000461228 PIK3C2GO75747 1445 aa22.01■■□□□ 1.11
DNMT3A-207ENST00000461228 ATRNO75882 1429 aa22.01■■□□□ 1.11
DNMT3A-207ENST00000461228 C8orf37Q96NL8 207 aa22■■□□□ 1.11
DNMT3A-207ENST00000461228 NPHP3Q7Z494 1330 aa22■■□□□ 1.11
DNMT3A-207ENST00000461228 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
DNMT3A-207ENST00000461228 NGLY1Q96IV0 654 aa21.99■■□□□ 1.11
DNMT3A-207ENST00000461228 FNBP4Q8N3X1 1017 aaPredicted RBP21.98■■□□□ 1.11
DNMT3A-207ENST00000461228 LRPPRCP42704 1394 aaKnown RBP21.97■■□□□ 1.11
DNMT3A-207ENST00000461228 USP32Q8NFA0 1604 aa21.96■■□□□ 1.11
DNMT3A-207ENST00000461228 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
DNMT3A-207ENST00000461228 NRXN1Q9ULB1 1477 aa21.96■■□□□ 1.11
DNMT3A-207ENST00000461228 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
DNMT3A-207ENST00000461228 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
DNMT3A-207ENST00000461228 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
DNMT3A-207ENST00000461228 ABCC11Q96J66 1382 aa21.95■■□□□ 1.1
DNMT3A-207ENST00000461228 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
DNMT3A-207ENST00000461228 TRPC5Q9UL62 973 aaPredicted RBP21.94■■□□□ 1.1
DNMT3A-207ENST00000461228 NWD2Q9ULI1 1742 aa21.94■■□□□ 1.1
DNMT3A-207ENST00000461228 ADGRB2O60241 1585 aa21.93■■□□□ 1.1
DNMT3A-207ENST00000461228 ORAI2Q96SN7 254 aa21.93■■□□□ 1.1
DNMT3A-207ENST00000461228 BCL9LQ86UU0 1499 aa21.92■■□□□ 1.1
DNMT3A-207ENST00000461228 SLIT2O94813 1529 aa21.9■■□□□ 1.1
DNMT3A-207ENST00000461228 USP21Q9UK80 565 aa21.89■■□□□ 1.09
DNMT3A-207ENST00000461228 DLC1Q96QB1 1528 aa21.89■■□□□ 1.09
DNMT3A-207ENST00000461228 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
DNMT3A-207ENST00000461228 YTHDC2Q9H6S0 1430 aaKnown RBP21.88■■□□□ 1.09
DNMT3A-207ENST00000461228 ADAMTS2O95450 1211 aa21.87■■□□□ 1.09
DNMT3A-207ENST00000461228 GLI3P10071 1580 aa21.87■■□□□ 1.09
DNMT3A-207ENST00000461228 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
DNMT3A-207ENST00000461228 SIRT1Q96EB6 747 aa21.85■■□□□ 1.09
DNMT3A-207ENST00000461228 FOXD1Q16676 465 aa21.84■■□□□ 1.09
DNMT3A-207ENST00000461228 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
DNMT3A-207ENST00000461228 TNS3Q68CZ2 1445 aa21.83■■□□□ 1.09
DNMT3A-207ENST00000461228 PPARGC1BQ86YN6 1023 aaKnown RBP21.83■■□□□ 1.09
DNMT3A-207ENST00000461228 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
DNMT3A-207ENST00000461228 CCDC125Q86Z20 511 aa21.82■■□□□ 1.08
DNMT3A-207ENST00000461228 ANKARQ7Z5J8 1434 aa21.81■■□□□ 1.08
DNMT3A-207ENST00000461228 BRWD3Q6RI45 1802 aa21.8■■□□□ 1.08
DNMT3A-207ENST00000461228 TRPM3Q9HCF6 1732 aaPredicted RBP21.8■■□□□ 1.08
DNMT3A-207ENST00000461228 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
DNMT3A-207ENST00000461228 RALGAPBQ86X10 1494 aa21.79■■□□□ 1.08
DNMT3A-207ENST00000461228 NRAPQ86VF7 1730 aa21.79■■□□□ 1.08
DNMT3A-207ENST00000461228 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
DNMT3A-207ENST00000461228 PLEKHH1Q9ULM0 1364 aa21.78■■□□□ 1.08
DNMT3A-207ENST00000461228 ALS2Q96Q42 1657 aa21.78■■□□□ 1.08
DNMT3A-207ENST00000461228 SBNO1A3KN83 1393 aa21.77■■□□□ 1.08
DNMT3A-207ENST00000461228 CRYBG1Q9Y4K1 1723 aa21.77■■□□□ 1.08
DNMT3A-207ENST00000461228 FOXO3O43524 673 aa21.76■■□□□ 1.07
DNMT3A-207ENST00000461228 ARHGEF10O15013 1369 aa21.75■■□□□ 1.07
DNMT3A-207ENST00000461228 BLMP54132 1417 aaPredicted RBP21.75■■□□□ 1.07
DNMT3A-207ENST00000461228 GJD4Q96KN9 370 aaPredicted RBP21.75■■□□□ 1.07
DNMT3A-207ENST00000461228 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
DNMT3A-207ENST00000461228 ITSN1Q15811 1721 aa21.75■■□□□ 1.07
DNMT3A-207ENST00000461228 LRP5O75197 1615 aa21.74■■□□□ 1.07
DNMT3A-207ENST00000461228 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
DNMT3A-207ENST00000461228 EIF3AQ14152 1382 aaKnown RBP21.73■■□□□ 1.07
DNMT3A-207ENST00000461228 UNC5CLQ8IV45 518 aa21.72■■□□□ 1.07
DNMT3A-207ENST00000461228 DHX57Q6P158 1386 aaKnown RBP21.72■■□□□ 1.07
DNMT3A-207ENST00000461228 WAPLQ7Z5K2 1190 aa21.71■■□□□ 1.07
DNMT3A-207ENST00000461228 COL14A1Q05707 1796 aaKnown RBP21.71■■□□□ 1.07
DNMT3A-207ENST00000461228 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.07
DNMT3A-207ENST00000461228 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
DNMT3A-207ENST00000461228 RGL3Q3MIN7 710 aa21.67■■□□□ 1.06
DNMT3A-207ENST00000461228 STK26Q9P289 416 aa21.67■■□□□ 1.06
DNMT3A-207ENST00000461228 ZRANB1Q9UGI0 708 aa21.67■■□□□ 1.06
DNMT3A-207ENST00000461228 XPCQ01831 940 aaPredicted RBP21.66■■□□□ 1.06
DNMT3A-207ENST00000461228 PSME1Q06323 249 aa21.66■■□□□ 1.06
DNMT3A-207ENST00000461228 TMEM132EQ6IEE7 984 aa21.66■■□□□ 1.06
DNMT3A-207ENST00000461228 PHF8Q9UPP1 1060 aa21.66■■□□□ 1.06
DNMT3A-207ENST00000461228 RGPD1P0DJD0 1748 aa21.66■■□□□ 1.06
DNMT3A-207ENST00000461228 VPS72Q15906 364 aa21.65■■□□□ 1.06
DNMT3A-207ENST00000461228 THSD7AQ9UPZ6 1657 aa21.64■■□□□ 1.05
DNMT3A-207ENST00000461228 ONECUT3O60422 494 aaPredicted RBP21.63■■□□□ 1.05
DNMT3A-207ENST00000461228 KRT28Q7Z3Y7 464 aa21.63■■□□□ 1.05
DNMT3A-207ENST00000461228 TOPAZ1Q8N9V7 1692 aa21.63■■□□□ 1.05
DNMT3A-207ENST00000461228 KIAA1210Q9ULL0 1709 aa21.62■■□□□ 1.05
DNMT3A-207ENST00000461228 STAC3Q96MF2 364 aa21.61■■□□□ 1.05
DNMT3A-207ENST00000461228 PHRF1Q9P1Y6 1649 aaKnown RBP21.61■■□□□ 1.05
DNMT3A-207ENST00000461228 ATP7BP35670 1465 aa21.59■■□□□ 1.05
DNMT3A-207ENST00000461228 NUTM2FA1L443 756 aa21.59■■□□□ 1.05
DNMT3A-207ENST00000461228 TNS1Q9HBL0 1735 aaKnown RBP21.58■■□□□ 1.05
DNMT3A-207ENST00000461228 PRAM1Q96QH2 718 aa21.58■■□□□ 1.05
DNMT3A-207ENST00000461228 DISP2A7MBM2 1401 aa21.57■■□□□ 1.04
DNMT3A-207ENST00000461228 CFAP70Q5T0N1 1121 aa21.57■■□□□ 1.04
DNMT3A-207ENST00000461228 RAB3GAP2Q9H2M9 1393 aa21.56■■□□□ 1.04
DNMT3A-207ENST00000461228 GPRASP1Q5JY77 1395 aa21.54■■□□□ 1.04
DNMT3A-207ENST00000461228 HAP1P54257 671 aaPredicted RBP21.54■■□□□ 1.04
DNMT3A-207ENST00000461228 SEPT12Q8IYM1 358 aa21.53■■□□□ 1.04
DNMT3A-207ENST00000461228 KRT27Q7Z3Y8 459 aa21.5■■□□□ 1.03
DNMT3A-207ENST00000461228 NRKQ7Z2Y5 1582 aa21.49■■□□□ 1.03
DNMT3A-207ENST00000461228 SF3B2Q13435 895 aaKnown RBP21.49■■□□□ 1.03
DNMT3A-207ENST00000461228 POGKQ9P215 609 aa21.49■■□□□ 1.03
DNMT3A-207ENST00000461228 PRR36Q9H6K5 1346 aa21.48■■□□□ 1.03
DNMT3A-207ENST00000461228 CABLES1Q8TDN4 633 aa21.47■■□□□ 1.03
DNMT3A-207ENST00000461228 LMO7Q8WWI1 1683 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms