RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 SLC12A5Q9H2X9 1139 aa15.55■□□□□ 0.08
GCOM1-203ENST00000460962 PPRC1Q5VV67 1664 aaKnown RBP15.55■□□□□ 0.08
GCOM1-203ENST00000460962 TCP11L2Q8N4U5 519 aa15.55■□□□□ 0.08
GCOM1-203ENST00000460962 VIRMAQ69YN4 1812 aaKnown RBP15.55■□□□□ 0.08
GCOM1-203ENST00000460962 SETBP1Q9Y6X0 1596 aa15.54■□□□□ 0.08
GCOM1-203ENST00000460962 RARSP54136 660 aaKnown RBP15.54■□□□□ 0.08
GCOM1-203ENST00000460962 SHPRHQ149N8 1683 aa15.53■□□□□ 0.08
GCOM1-203ENST00000460962 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
GCOM1-203ENST00000460962 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
GCOM1-203ENST00000460962 ADGRB3O60242 1522 aa15.53■□□□□ 0.08
GCOM1-203ENST00000460962 CFAP53Q96M91 514 aa15.52■□□□□ 0.08
GCOM1-203ENST00000460962 USP19O94966 1318 aa15.52■□□□□ 0.08
GCOM1-203ENST00000460962 AAMPQ13685 434 aa15.52■□□□□ 0.08
GCOM1-203ENST00000460962 WDR63Q8IWG1 891 aa15.52■□□□□ 0.08
GCOM1-203ENST00000460962 LMTK2Q8IWU2 1503 aa15.51■□□□□ 0.07
GCOM1-203ENST00000460962 MTHFSP49914 203 aa15.51■□□□□ 0.07
GCOM1-203ENST00000460962 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
GCOM1-203ENST00000460962 IQSEC2Q5JU85 1478 aa15.51■□□□□ 0.07
GCOM1-203ENST00000460962 QRICH2Q9H0J4 1663 aa15.51■□□□□ 0.07
GCOM1-203ENST00000460962 BECN1Q14457 450 aa15.5■□□□□ 0.07
GCOM1-203ENST00000460962 PHF23Q9BUL5 403 aaPredicted RBP15.5■□□□□ 0.07
GCOM1-203ENST00000460962 KIDINS220Q9ULH0 1771 aa15.5■□□□□ 0.07
GCOM1-203ENST00000460962 SEC24BO95487 1268 aa15.5■□□□□ 0.07
GCOM1-203ENST00000460962 TMEM132EQ6IEE7 984 aa15.5■□□□□ 0.07
GCOM1-203ENST00000460962 BCL2L13Q9BXK5 485 aa15.5■□□□□ 0.07
GCOM1-203ENST00000460962 BRPF3Q9ULD4 1205 aa15.5■□□□□ 0.07
GCOM1-203ENST00000460962 RLBP1P12271 317 aa15.48■□□□□ 0.07
GCOM1-203ENST00000460962 ZC3H13Q5T200 1668 aaKnown RBP15.48■□□□□ 0.07
GCOM1-203ENST00000460962 ZNF518AQ6AHZ1 1483 aa15.48■□□□□ 0.07
GCOM1-203ENST00000460962 CCDC27Q2M243 656 aa15.48■□□□□ 0.07
GCOM1-203ENST00000460962 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
GCOM1-203ENST00000460962 PCDHB15Q9Y5E8 787 aa15.48■□□□□ 0.07
GCOM1-203ENST00000460962 UPF2Q9HAU5 1272 aaKnown RBP15.48■□□□□ 0.07
GCOM1-203ENST00000460962 TNNQ9UQP3 1299 aa15.48■□□□□ 0.07
GCOM1-203ENST00000460962 CFAP65Q6ZU64 1925 aaKnown RBP15.47■□□□□ 0.07
GCOM1-203ENST00000460962 NPATQ14207 1427 aa15.47■□□□□ 0.07
GCOM1-203ENST00000460962 ADGRB1O14514 1584 aa15.47■□□□□ 0.07
GCOM1-203ENST00000460962 PPLO60437 1756 aa15.47■□□□□ 0.07
GCOM1-203ENST00000460962 GGT6Q6P531 493 aa15.47■□□□□ 0.07
GCOM1-203ENST00000460962 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
GCOM1-203ENST00000460962 USP32Q8NFA0 1604 aa15.46■□□□□ 0.07
GCOM1-203ENST00000460962 U2AF1L5P0DN76 240 aaPredicted RBP15.46■□□□□ 0.06
GCOM1-203ENST00000460962 U2AF1Q01081 240 aaKnown RBP eCLIP15.46■□□□□ 0.06
GCOM1-203ENST00000460962 RWDD1Q9H446 243 aaPredicted RBP15.46■□□□□ 0.06
GCOM1-203ENST00000460962 RPGRIP1LQ68CZ1 1315 aa15.45■□□□□ 0.06
GCOM1-203ENST00000460962 PDZRN3Q9UPQ7 1066 aa15.45■□□□□ 0.06
GCOM1-203ENST00000460962 EVC2Q86UK5 1308 aa15.45■□□□□ 0.06
GCOM1-203ENST00000460962 ZMYM3Q14202 1370 aa15.44■□□□□ 0.06
GCOM1-203ENST00000460962 NLRP1Q9C000 1473 aa15.44■□□□□ 0.06
GCOM1-203ENST00000460962 SLKQ9H2G2 1235 aaPredicted RBP15.44■□□□□ 0.06
GCOM1-203ENST00000460962 NSD2O96028 1365 aa15.43■□□□□ 0.06
GCOM1-203ENST00000460962 ANKRD36BQ8N2N9 1353 aa15.43■□□□□ 0.06
GCOM1-203ENST00000460962 FTSJ3Q8IY81 847 aaKnown RBP15.43■□□□□ 0.06
GCOM1-203ENST00000460962 MVPQ14764 893 aaKnown RBP15.42■□□□□ 0.06
GCOM1-203ENST00000460962 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
GCOM1-203ENST00000460962 ZKSCAN2Q63HK3 967 aa15.42■□□□□ 0.06
GCOM1-203ENST00000460962 PUS7Q96PZ0 661 aaKnown RBP15.42■□□□□ 0.06
GCOM1-203ENST00000460962 NUTM2DQ5VT03 806 aaPredicted RBP15.41■□□□□ 0.06
GCOM1-203ENST00000460962 TBC1D32Q96NH3 1257 aa15.41■□□□□ 0.06
GCOM1-203ENST00000460962 GLI2P10070 1586 aa15.41■□□□□ 0.06
GCOM1-203ENST00000460962 DZIP1LQ8IYY4 767 aaKnown RBP15.4■□□□□ 0.06
GCOM1-203ENST00000460962 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
GCOM1-203ENST00000460962 VGFO15240 615 aaPredicted RBP15.4■□□□□ 0.06
GCOM1-203ENST00000460962 CABP2Q9NPB3 220 aa15.4■□□□□ 0.06
GCOM1-203ENST00000460962 TULP4Q9NRJ4 1543 aa15.39■□□□□ 0.05
GCOM1-203ENST00000460962 CT47B1P0C2W7 299 aaPredicted RBP15.39■□□□□ 0.05
GCOM1-203ENST00000460962 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
GCOM1-203ENST00000460962 SMC4Q9NTJ3 1288 aa15.38■□□□□ 0.05
GCOM1-203ENST00000460962 POGZQ7Z3K3 1410 aa15.38■□□□□ 0.05
GCOM1-203ENST00000460962 U2SURPO15042 1029 aaKnown RBP15.38■□□□□ 0.05
GCOM1-203ENST00000460962 SAFB2Q14151 953 aaKnown RBP eCLIP15.38■□□□□ 0.05
GCOM1-203ENST00000460962 FRMPD1Q5SYB0 1578 aa15.38■□□□□ 0.05
GCOM1-203ENST00000460962 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
GCOM1-203ENST00000460962 ADGRB2O60241 1585 aa15.37■□□□□ 0.05
GCOM1-203ENST00000460962 ABCC3O15438 1527 aa15.37■□□□□ 0.05
GCOM1-203ENST00000460962 ARHGEF28Q8N1W1 1705 aaKnown RBP15.37■□□□□ 0.05
GCOM1-203ENST00000460962 MLH3Q9UHC1 1453 aa15.37■□□□□ 0.05
GCOM1-203ENST00000460962 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
GCOM1-203ENST00000460962 TBC1D2Q9BYX2 928 aa15.36■□□□□ 0.05
GCOM1-203ENST00000460962 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
GCOM1-203ENST00000460962 ANTXR1Q9H6X2 564 aa15.36■□□□□ 0.05
GCOM1-203ENST00000460962 POGKQ9P215 609 aa15.36■□□□□ 0.05
GCOM1-203ENST00000460962 TMPOP42166 694 aaKnown RBP15.35■□□□□ 0.05
GCOM1-203ENST00000460962 SRPK2P78362 688 aaKnown RBP15.35■□□□□ 0.05
GCOM1-203ENST00000460962 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
GCOM1-203ENST00000460962 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
GCOM1-203ENST00000460962 ITPRIPQ8IWB1 547 aa15.34■□□□□ 0.05
GCOM1-203ENST00000460962 GGNBP2Q9H3C7 697 aa15.34■□□□□ 0.05
GCOM1-203ENST00000460962 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
GCOM1-203ENST00000460962 TRIM27P14373 513 aa15.34■□□□□ 0.05
GCOM1-203ENST00000460962 DDX19BQ9UMR2 479 aa15.34■□□□□ 0.05
GCOM1-203ENST00000460962 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
GCOM1-203ENST00000460962 CAMSAP1Q5T5Y3 1602 aa15.34■□□□□ 0.05
GCOM1-203ENST00000460962 SSH1Q8WYL5 1049 aa15.33■□□□□ 0.04
GCOM1-203ENST00000460962 STK26Q9P289 416 aa15.33■□□□□ 0.04
GCOM1-203ENST00000460962 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.04
GCOM1-203ENST00000460962 PLEKHF1Q96S99 279 aa15.33■□□□□ 0.04
GCOM1-203ENST00000460962 HDAC1Q13547 482 aaPredicted RBP15.32■□□□□ 0.04
GCOM1-203ENST00000460962 ATF7IPQ6VMQ6 1270 aa15.32■□□□□ 0.04
GCOM1-203ENST00000460962 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms