RNA–Protein interactions for RNA: ENST00000460609.3

RN7SL254P-201, Transcript of RNA, 7SL, cytoplasmic 254, pseudogene, humanhuman

BASIC

Gene RN7SL254P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL254P-201ENST00000460609 LAMC1P11047 1609 aa9.29□□□□□ -0.92
RN7SL254P-201ENST00000460609 TECPR2O15040 1411 aa9.29□□□□□ -0.92
RN7SL254P-201ENST00000460609 ADGRF5Q8IZF2 1346 aa9.29□□□□□ -0.92
RN7SL254P-201ENST00000460609 ABCC11Q96J66 1382 aa9.28□□□□□ -0.92
RN7SL254P-201ENST00000460609 ESCO1Q5FWF5 840 aa9.28□□□□□ -0.92
RN7SL254P-201ENST00000460609 DDX17Q92841 729 aaKnown RBP9.28□□□□□ -0.92
RN7SL254P-201ENST00000460609 QTRT2Q9H974 415 aaKnown RBP9.28□□□□□ -0.92
RN7SL254P-201ENST00000460609 SPATA31E1Q6ZUB1 1445 aa9.28□□□□□ -0.92
RN7SL254P-201ENST00000460609 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
RN7SL254P-201ENST00000460609 UPF1Q92900 1129 aaKnown RBP eCLIP9.27□□□□□ -0.93
RN7SL254P-201ENST00000460609 STK26Q9P289 416 aa9.27□□□□□ -0.93
RN7SL254P-201ENST00000460609 TRPC5Q9UL62 973 aaPredicted RBP9.27□□□□□ -0.93
RN7SL254P-201ENST00000460609 PIK3C2GO75747 1445 aa9.27□□□□□ -0.93
RN7SL254P-201ENST00000460609 KNDC1Q76NI1 1749 aa9.26□□□□□ -0.93
RN7SL254P-201ENST00000460609 SIRT1Q96EB6 747 aa9.26□□□□□ -0.93
RN7SL254P-201ENST00000460609 USP21Q9UK80 565 aa9.26□□□□□ -0.93
RN7SL254P-201ENST00000460609 DHX57Q6P158 1386 aaKnown RBP9.25□□□□□ -0.93
RN7SL254P-201ENST00000460609 YTHDC2Q9H6S0 1430 aaKnown RBP9.25□□□□□ -0.93
RN7SL254P-201ENST00000460609 MYOM2P54296 1465 aa9.25□□□□□ -0.93
RN7SL254P-201ENST00000460609 IFT172Q9UG01 1749 aa9.25□□□□□ -0.93
RN7SL254P-201ENST00000460609 COL22A1Q8NFW1 1626 aaPredicted RBP9.24□□□□□ -0.93
RN7SL254P-201ENST00000460609 FOXO3O43524 673 aa9.24□□□□□ -0.93
RN7SL254P-201ENST00000460609 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
RN7SL254P-201ENST00000460609 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
RN7SL254P-201ENST00000460609 RGS12O14924 1447 aa9.23□□□□□ -0.93
RN7SL254P-201ENST00000460609 KIF1AQ12756 1690 aa9.23□□□□□ -0.93
RN7SL254P-201ENST00000460609 PSME1Q06323 249 aa9.23□□□□□ -0.93
RN7SL254P-201ENST00000460609 TMEM132EQ6IEE7 984 aa9.23□□□□□ -0.93
RN7SL254P-201ENST00000460609 FNBP4Q8N3X1 1017 aaPredicted RBP9.23□□□□□ -0.93
RN7SL254P-201ENST00000460609 C14orf93Q9H972 538 aaKnown RBP9.23□□□□□ -0.93
RN7SL254P-201ENST00000460609 PXDNQ92626 1479 aa9.22□□□□□ -0.93
RN7SL254P-201ENST00000460609 NUTM2FA1L443 756 aa9.22□□□□□ -0.93
RN7SL254P-201ENST00000460609 HAP1P54257 671 aaPredicted RBP9.22□□□□□ -0.93
RN7SL254P-201ENST00000460609 STAC3Q96MF2 364 aa9.22□□□□□ -0.93
RN7SL254P-201ENST00000460609 EIF3AQ14152 1382 aaKnown RBP9.22□□□□□ -0.93
RN7SL254P-201ENST00000460609 NRXN1Q9ULB1 1477 aa9.21□□□□□ -0.93
RN7SL254P-201ENST00000460609 POGKQ9P215 609 aa9.21□□□□□ -0.94
RN7SL254P-201ENST00000460609 FMN2Q9NZ56 1722 aa9.21□□□□□ -0.94
RN7SL254P-201ENST00000460609 RAB3GAP2Q9H2M9 1393 aa9.21□□□□□ -0.94
RN7SL254P-201ENST00000460609 PLEKHH1Q9ULM0 1364 aa9.21□□□□□ -0.94
RN7SL254P-201ENST00000460609 ATRNO75882 1429 aa9.21□□□□□ -0.94
RN7SL254P-201ENST00000460609 XPCQ01831 940 aaPredicted RBP9.2□□□□□ -0.94
RN7SL254P-201ENST00000460609 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
RN7SL254P-201ENST00000460609 KRT28Q7Z3Y7 464 aa9.2□□□□□ -0.94
RN7SL254P-201ENST00000460609 PHF8Q9UPP1 1060 aa9.2□□□□□ -0.94
RN7SL254P-201ENST00000460609 SPATA31A3Q5VYP0 1347 aa9.2□□□□□ -0.94
RN7SL254P-201ENST00000460609 ARHGEF10O15013 1369 aa9.2□□□□□ -0.94
RN7SL254P-201ENST00000460609 DLC1Q96QB1 1528 aa9.2□□□□□ -0.94
RN7SL254P-201ENST00000460609 CCDC125Q86Z20 511 aa9.19□□□□□ -0.94
RN7SL254P-201ENST00000460609 PRAM1Q96QH2 718 aa9.19□□□□□ -0.94
RN7SL254P-201ENST00000460609 TNS3Q68CZ2 1445 aa9.19□□□□□ -0.94
RN7SL254P-201ENST00000460609 ANKARQ7Z5J8 1434 aa9.19□□□□□ -0.94
RN7SL254P-201ENST00000460609 SBNO1A3KN83 1393 aa9.18□□□□□ -0.94
RN7SL254P-201ENST00000460609 HRCP23327 699 aa9.18□□□□□ -0.94
RN7SL254P-201ENST00000460609 UNC5CLQ8IV45 518 aa9.18□□□□□ -0.94
RN7SL254P-201ENST00000460609 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
RN7SL254P-201ENST00000460609 MARF1Q9Y4F3 1742 aaKnown RBP9.17□□□□□ -0.94
RN7SL254P-201ENST00000460609 SAFB2Q14151 953 aaKnown RBP eCLIP9.17□□□□□ -0.94
RN7SL254P-201ENST00000460609 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.17□□□□□ -0.94
RN7SL254P-201ENST00000460609 BCL9LQ86UU0 1499 aa9.16□□□□□ -0.94
RN7SL254P-201ENST00000460609 GPRASP1Q5JY77 1395 aa9.16□□□□□ -0.94
RN7SL254P-201ENST00000460609 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
RN7SL254P-201ENST00000460609 DCAF11Q8TEB1 546 aa9.16□□□□□ -0.94
RN7SL254P-201ENST00000460609 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
RN7SL254P-201ENST00000460609 ADGRB2O60241 1585 aa9.16□□□□□ -0.94
RN7SL254P-201ENST00000460609 TRAK1Q9UPV9 953 aa9.15□□□□□ -0.94
RN7SL254P-201ENST00000460609 KDM2AQ9Y2K7 1162 aa9.15□□□□□ -0.94
RN7SL254P-201ENST00000460609 SLIT2O94813 1529 aa9.15□□□□□ -0.95
RN7SL254P-201ENST00000460609 SF3B2Q13435 895 aaKnown RBP9.14□□□□□ -0.95
RN7SL254P-201ENST00000460609 CCDC9Q9Y3X0 531 aaKnown RBP9.14□□□□□ -0.95
RN7SL254P-201ENST00000460609 ADGRB1O14514 1584 aa9.14□□□□□ -0.95
RN7SL254P-201ENST00000460609 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
RN7SL254P-201ENST00000460609 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
RN7SL254P-201ENST00000460609 VPS72Q15906 364 aa9.13□□□□□ -0.95
RN7SL254P-201ENST00000460609 PMFBP1Q8TBY8 1022 aa9.13□□□□□ -0.95
RN7SL254P-201ENST00000460609 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
RN7SL254P-201ENST00000460609 TULP4Q9NRJ4 1543 aa9.13□□□□□ -0.95
RN7SL254P-201ENST00000460609 RALGAPBQ86X10 1494 aa9.13□□□□□ -0.95
RN7SL254P-201ENST00000460609 NGDNQ8NEJ9 315 aaKnown RBP9.12□□□□□ -0.95
RN7SL254P-201ENST00000460609 HIRIP3Q9BW71 556 aaPredicted RBP9.12□□□□□ -0.95
RN7SL254P-201ENST00000460609 BLMP54132 1417 aaPredicted RBP9.12□□□□□ -0.95
RN7SL254P-201ENST00000460609 RGPD8O14715 1765 aaPredicted RBP9.12□□□□□ -0.95
RN7SL254P-201ENST00000460609 NWD2Q9ULI1 1742 aa9.11□□□□□ -0.95
RN7SL254P-201ENST00000460609 A0A0G2JS52 829 aa9.11□□□□□ -0.95
RN7SL254P-201ENST00000460609 PLEKHG5O94827 1062 aa9.11□□□□□ -0.95
RN7SL254P-201ENST00000460609 MYT1Q01538 1121 aa9.11□□□□□ -0.95
RN7SL254P-201ENST00000460609 CABLES1Q8TDN4 633 aa9.11□□□□□ -0.95
RN7SL254P-201ENST00000460609 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
RN7SL254P-201ENST00000460609 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
RN7SL254P-201ENST00000460609 GLI3P10071 1580 aa9.09□□□□□ -0.95
RN7SL254P-201ENST00000460609 IFFO2Q5TF58 517 aa9.09□□□□□ -0.95
RN7SL254P-201ENST00000460609 KRT27Q7Z3Y8 459 aa9.09□□□□□ -0.95
RN7SL254P-201ENST00000460609 PLCH1Q4KWH8 1693 aa9.09□□□□□ -0.95
RN7SL254P-201ENST00000460609 ATP7BP35670 1465 aa9.08□□□□□ -0.96
RN7SL254P-201ENST00000460609 ITSN1Q15811 1721 aa9.08□□□□□ -0.96
RN7SL254P-201ENST00000460609 ABCA3Q99758 1704 aa9.08□□□□□ -0.96
RN7SL254P-201ENST00000460609 SRCAPQ6ZRS2 3230 aa9.08□□□□□ -0.96
RN7SL254P-201ENST00000460609 FAM83GA6ND36 823 aa9.08□□□□□ -0.96
RN7SL254P-201ENST00000460609 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
RN7SL254P-201ENST00000460609 PRDM11Q9NQV5 511 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms