RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 TSC1Q92574 1164 aa9.67□□□□□ -0.86
VBP1-202ENST00000460509 HRCP23327 699 aa9.66□□□□□ -0.86
VBP1-202ENST00000460509 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
VBP1-202ENST00000460509 RTL5Q5HYW3 569 aaPredicted RBP9.66□□□□□ -0.86
VBP1-202ENST00000460509 MORN1Q5T089 497 aa9.66□□□□□ -0.86
VBP1-202ENST00000460509 FBXO31Q5XUX0 539 aaPredicted RBP9.66□□□□□ -0.86
VBP1-202ENST00000460509 SYMPKQ92797 1274 aaKnown RBP9.66□□□□□ -0.86
VBP1-202ENST00000460509 SLC27A5Q9Y2P5 690 aa9.66□□□□□ -0.86
VBP1-202ENST00000460509 LILRB3O75022 631 aa9.65□□□□□ -0.86
VBP1-202ENST00000460509 MTMR2Q13614 643 aa9.65□□□□□ -0.86
VBP1-202ENST00000460509 ERICH6Q7L0X2 663 aa9.65□□□□□ -0.86
VBP1-202ENST00000460509 AP1G2O75843 785 aa9.64□□□□□ -0.87
VBP1-202ENST00000460509 COPS2P61201 443 aa9.64□□□□□ -0.87
VBP1-202ENST00000460509 PRPF38BQ5VTL8 546 aaKnown RBP9.64□□□□□ -0.87
VBP1-202ENST00000460509 PPP2R2DQ66LE6 453 aa9.63□□□□□ -0.87
VBP1-202ENST00000460509 BLOC1S3Q6QNY0 202 aa9.63□□□□□ -0.87
VBP1-202ENST00000460509 NR1I2O75469 434 aa9.62□□□□□ -0.87
VBP1-202ENST00000460509 FLIIQ13045 1269 aa9.62□□□□□ -0.87
VBP1-202ENST00000460509 Q3C1V9 767 aa9.62□□□□□ -0.87
VBP1-202ENST00000460509 TMEM259Q4ZIN3 620 aa9.62□□□□□ -0.87
VBP1-202ENST00000460509 SCUBE3Q8IX30 993 aa9.62□□□□□ -0.87
VBP1-202ENST00000460509 RNF19BQ6ZMZ0 732 aa9.6□□□□□ -0.87
VBP1-202ENST00000460509 NYAP1Q6ZVC0 841 aa9.6□□□□□ -0.87
VBP1-202ENST00000460509 SPDYE5A6NIY4 337 aa9.59□□□□□ -0.87
VBP1-202ENST00000460509 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
VBP1-202ENST00000460509 HELBQ8NG08 1087 aaPredicted RBP9.58□□□□□ -0.88
VBP1-202ENST00000460509 PRR7Q8TB68 274 aa9.58□□□□□ -0.88
VBP1-202ENST00000460509 CFAP99D6REC4 459 aa9.57□□□□□ -0.88
VBP1-202ENST00000460509 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
VBP1-202ENST00000460509 RETREG3Q86VR2 466 aa9.57□□□□□ -0.88
VBP1-202ENST00000460509 MTRQ99707 1265 aa9.57□□□□□ -0.88
VBP1-202ENST00000460509 SNRKQ9NRH2 765 aa9.57□□□□□ -0.88
VBP1-202ENST00000460509 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
VBP1-202ENST00000460509 CTDSPL2Q05D32 466 aa9.56□□□□□ -0.88
VBP1-202ENST00000460509 MCM6Q14566 821 aa9.56□□□□□ -0.88
VBP1-202ENST00000460509 BRICD5Q6PL45 260 aa9.56□□□□□ -0.88
VBP1-202ENST00000460509 BANK1Q8NDB2 785 aa9.56□□□□□ -0.88
VBP1-202ENST00000460509 USB1Q9BQ65 265 aaKnown RBP9.56□□□□□ -0.88
VBP1-202ENST00000460509 USP17L8P0C7I0 530 aa9.55□□□□□ -0.88
VBP1-202ENST00000460509 A0A0G2JS52 829 aa9.54□□□□□ -0.88
VBP1-202ENST00000460509 SPSB2Q99619 263 aa9.54□□□□□ -0.88
VBP1-202ENST00000460509 TLL1O43897 1013 aa9.53□□□□□ -0.88
VBP1-202ENST00000460509 ZPR1O75312 459 aa9.53□□□□□ -0.88
VBP1-202ENST00000460509 ZNF516Q92618 1163 aa9.53□□□□□ -0.88
VBP1-202ENST00000460509 IL21Q9HBE4 155 aa9.53□□□□□ -0.88
VBP1-202ENST00000460509 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
VBP1-202ENST00000460509 THAP11Q96EK4 314 aa9.52□□□□□ -0.89
VBP1-202ENST00000460509 ZMYND15Q9H091 742 aa9.52□□□□□ -0.89
VBP1-202ENST00000460509 RAD21O60216 631 aa9.51□□□□□ -0.89
VBP1-202ENST00000460509 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
VBP1-202ENST00000460509 CLUAP1Q96AJ1 413 aa9.51□□□□□ -0.89
VBP1-202ENST00000460509 ITGBL1O95965 494 aaPredicted RBP9.5□□□□□ -0.89
VBP1-202ENST00000460509 TJAP1Q5JTD0 557 aa9.5□□□□□ -0.89
VBP1-202ENST00000460509 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
VBP1-202ENST00000460509 MTMR14Q8NCE2 650 aa9.49□□□□□ -0.89
VBP1-202ENST00000460509 APBB1O00213 710 aa9.48□□□□□ -0.89
VBP1-202ENST00000460509 FAM160A2Q8N612 972 aaPredicted RBP9.48□□□□□ -0.89
VBP1-202ENST00000460509 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
VBP1-202ENST00000460509 PRM3Q9NNZ6 103 aa9.48□□□□□ -0.89
VBP1-202ENST00000460509 PRDM9Q9NQV7 894 aa9.48□□□□□ -0.89
VBP1-202ENST00000460509 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
VBP1-202ENST00000460509 ADH1BP00325 375 aa9.47□□□□□ -0.89
VBP1-202ENST00000460509 JUNDP17535 347 aa9.47□□□□□ -0.89
VBP1-202ENST00000460509 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
VBP1-202ENST00000460509 RGS20O76081 388 aa9.46□□□□□ -0.9
VBP1-202ENST00000460509 DESI1Q6ICB0 168 aa9.46□□□□□ -0.9
VBP1-202ENST00000460509 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
VBP1-202ENST00000460509 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
VBP1-202ENST00000460509 CTHP32929 405 aa9.45□□□□□ -0.9
VBP1-202ENST00000460509 ABL2P42684 1182 aa9.45□□□□□ -0.9
VBP1-202ENST00000460509 MSS51Q4VC12 460 aa9.45□□□□□ -0.9
VBP1-202ENST00000460509 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
VBP1-202ENST00000460509 SLC6A16Q9GZN6 736 aa9.45□□□□□ -0.9
VBP1-202ENST00000460509 KCNC4Q03721 635 aa9.44□□□□□ -0.9
VBP1-202ENST00000460509 NR6A1Q15406 480 aa9.44□□□□□ -0.9
VBP1-202ENST00000460509 CCDC24Q8N4L8 307 aa9.44□□□□□ -0.9
VBP1-202ENST00000460509 COG6Q9Y2V7 657 aa9.44□□□□□ -0.9
VBP1-202ENST00000460509 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
VBP1-202ENST00000460509 TBC1D2BQ9UPU7 963 aa9.43□□□□□ -0.9
VBP1-202ENST00000460509 S1PR4O95977 384 aa9.42□□□□□ -0.9
VBP1-202ENST00000460509 PTPRNQ16849 979 aa9.42□□□□□ -0.9
VBP1-202ENST00000460509 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
VBP1-202ENST00000460509 NUDT12Q9BQG2 462 aa9.42□□□□□ -0.9
VBP1-202ENST00000460509 NDUFB9Q9Y6M9 179 aa9.42□□□□□ -0.9
VBP1-202ENST00000460509 DXOO77932 396 aaKnown RBP9.41□□□□□ -0.9
VBP1-202ENST00000460509 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
VBP1-202ENST00000460509 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
VBP1-202ENST00000460509 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
VBP1-202ENST00000460509 A6NJR5 290 aa9.4□□□□□ -0.9
VBP1-202ENST00000460509 CCNYL3P0C7X3 344 aa9.4□□□□□ -0.9
VBP1-202ENST00000460509 MMP16P51512 607 aa9.4□□□□□ -0.9
VBP1-202ENST00000460509 IRX2Q9BZI1 471 aaPredicted RBP9.4□□□□□ -0.9
VBP1-202ENST00000460509 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
VBP1-202ENST00000460509 SOCS7O14512 581 aa9.38□□□□□ -0.91
VBP1-202ENST00000460509 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
VBP1-202ENST00000460509 TRAK2O60296 914 aa9.37□□□□□ -0.91
VBP1-202ENST00000460509 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
VBP1-202ENST00000460509 EVA1BQ9NVM1 165 aa9.37□□□□□ -0.91
VBP1-202ENST00000460509 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
VBP1-202ENST00000460509 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms