RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
RFC4-211ENST00000460408 AXIN1O15169 862 aa8□□□□□ -1.13
RFC4-211ENST00000460408 ZBTB24O43167 697 aaPredicted RBP7.99□□□□□ -1.13
RFC4-211ENST00000460408 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
RFC4-211ENST00000460408 RNF19BQ6ZMZ0 732 aa7.99□□□□□ -1.13
RFC4-211ENST00000460408 GMPR2Q9P2T1 348 aaKnown RBP7.98□□□□□ -1.13
RFC4-211ENST00000460408 WNT7AO00755 349 aa7.97□□□□□ -1.13
RFC4-211ENST00000460408 MMP16P51512 607 aa7.97□□□□□ -1.13
RFC4-211ENST00000460408 TTC24A2A3L6 582 aaPredicted RBP7.96□□□□□ -1.14
RFC4-211ENST00000460408 Q3C1V9 767 aa7.96□□□□□ -1.14
RFC4-211ENST00000460408 C11orf95C9JLR9 678 aaPredicted RBP7.95□□□□□ -1.14
RFC4-211ENST00000460408 SMPD1P17405 629 aa7.95□□□□□ -1.14
RFC4-211ENST00000460408 GPIHBP1Q8IV16 184 aa7.95□□□□□ -1.14
RFC4-211ENST00000460408 SNIP1Q8TAD8 396 aaKnown RBP7.95□□□□□ -1.14
RFC4-211ENST00000460408 CD46P15529 392 aa7.94□□□□□ -1.14
RFC4-211ENST00000460408 TRIM32Q13049 653 aa7.94□□□□□ -1.14
RFC4-211ENST00000460408 WFS1O76024 890 aa7.93□□□□□ -1.14
RFC4-211ENST00000460408 DXOO77932 396 aaKnown RBP7.92□□□□□ -1.14
RFC4-211ENST00000460408 NFX1Q12986 1120 aaKnown RBP7.92□□□□□ -1.14
RFC4-211ENST00000460408 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
RFC4-211ENST00000460408 USB1Q9BQ65 265 aaKnown RBP7.92□□□□□ -1.14
RFC4-211ENST00000460408 ATP13A2Q9NQ11 1180 aa7.91□□□□□ -1.14
RFC4-211ENST00000460408 KDM4AO75164 1064 aa7.9□□□□□ -1.14
RFC4-211ENST00000460408 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
RFC4-211ENST00000460408 J3QL48 77 aa7.89□□□□□ -1.15
RFC4-211ENST00000460408 WIPF1O43516 503 aa7.89□□□□□ -1.15
RFC4-211ENST00000460408 USP46P62068 366 aa7.89□□□□□ -1.15
RFC4-211ENST00000460408 MAP2K5Q13163 448 aa7.89□□□□□ -1.15
RFC4-211ENST00000460408 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
RFC4-211ENST00000460408 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
RFC4-211ENST00000460408 TPRNQ4KMQ1 711 aa7.87□□□□□ -1.15
RFC4-211ENST00000460408 TRIM47Q96LD4 638 aa7.87□□□□□ -1.15
RFC4-211ENST00000460408 SENP2Q9HC62 589 aa7.87□□□□□ -1.15
RFC4-211ENST00000460408 IRF6O14896 467 aa7.86□□□□□ -1.15
RFC4-211ENST00000460408 WNT7BP56706 349 aa7.86□□□□□ -1.15
RFC4-211ENST00000460408 HPS1Q92902 700 aa7.86□□□□□ -1.15
RFC4-211ENST00000460408 HLA-CQ95604 372 aa7.86□□□□□ -1.15
RFC4-211ENST00000460408 HOXA2O43364 376 aa7.85□□□□□ -1.15
RFC4-211ENST00000460408 SKOR1P84550 965 aa7.85□□□□□ -1.15
RFC4-211ENST00000460408 RC3H1Q5TC82 1133 aaKnown RBP7.85□□□□□ -1.15
RFC4-211ENST00000460408 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
RFC4-211ENST00000460408 TERTO14746 1132 aaKnown RBP7.84□□□□□ -1.15
RFC4-211ENST00000460408 MDM2Q00987 491 aaPredicted RBP7.84□□□□□ -1.15
RFC4-211ENST00000460408 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
RFC4-211ENST00000460408 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
RFC4-211ENST00000460408 MINK1Q8N4C8 1332 aaPredicted RBP7.83□□□□□ -1.16
RFC4-211ENST00000460408 INSM1Q01101 510 aaPredicted RBP7.83□□□□□ -1.16
RFC4-211ENST00000460408 KIFC2Q96AC6 838 aa7.83□□□□□ -1.16
RFC4-211ENST00000460408 JUNDP17535 347 aa7.82□□□□□ -1.16
RFC4-211ENST00000460408 GUCA2AQ02747 115 aa7.8□□□□□ -1.16
RFC4-211ENST00000460408 SIAH2O43255 324 aa7.79□□□□□ -1.16
RFC4-211ENST00000460408 ALDH1A1P00352 501 aa7.79□□□□□ -1.16
RFC4-211ENST00000460408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.79□□□□□ -1.16
RFC4-211ENST00000460408 CCDC102AQ96A19 550 aa7.79□□□□□ -1.16
RFC4-211ENST00000460408 GPCPD1Q9NPB8 672 aa7.79□□□□□ -1.16
RFC4-211ENST00000460408 FAM217BQ9NTX9 383 aaPredicted RBP7.79□□□□□ -1.16
RFC4-211ENST00000460408 CLCN1P35523 988 aa7.78□□□□□ -1.16
RFC4-211ENST00000460408 PTCRAQ6ISU1 281 aaPredicted RBP7.78□□□□□ -1.16
RFC4-211ENST00000460408 RETREG3Q86VR2 466 aa7.78□□□□□ -1.16
RFC4-211ENST00000460408 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
RFC4-211ENST00000460408 NUDT12Q9BQG2 462 aa7.77□□□□□ -1.17
RFC4-211ENST00000460408 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
RFC4-211ENST00000460408 NUTM1Q86Y26 1132 aa7.75□□□□□ -1.17
RFC4-211ENST00000460408 EHBP1Q8NDI1 1231 aa7.75□□□□□ -1.17
RFC4-211ENST00000460408 TRIM46Q7Z4K8 759 aa7.74□□□□□ -1.17
RFC4-211ENST00000460408 NXF1Q9UBU9 619 aaKnown RBP7.74□□□□□ -1.17
RFC4-211ENST00000460408 PCDHGC3Q9UN70 934 aa7.74□□□□□ -1.17
RFC4-211ENST00000460408 FDX1P10109 184 aa7.73□□□□□ -1.17
RFC4-211ENST00000460408 SLC16A10Q8TF71 515 aa7.73□□□□□ -1.17
RFC4-211ENST00000460408 CAPN5O15484 640 aaPredicted RBP7.72□□□□□ -1.17
RFC4-211ENST00000460408 CCNYL3P0C7X3 344 aa7.72□□□□□ -1.17
RFC4-211ENST00000460408 MS4A1P11836 297 aa7.72□□□□□ -1.17
RFC4-211ENST00000460408 SH3BP2P78314 561 aa7.72□□□□□ -1.17
RFC4-211ENST00000460408 NPAS3Q8IXF0 933 aa7.72□□□□□ -1.17
RFC4-211ENST00000460408 WASF2Q9Y6W5 498 aa7.72□□□□□ -1.17
RFC4-211ENST00000460408 BMP1P13497 986 aa7.71□□□□□ -1.18
RFC4-211ENST00000460408 PTPRNQ16849 979 aa7.71□□□□□ -1.18
RFC4-211ENST00000460408 C6orf229H3BNL8 230 aa7.7□□□□□ -1.18
RFC4-211ENST00000460408 KRI1Q8N9T8 703 aaKnown RBP7.7□□□□□ -1.18
RFC4-211ENST00000460408 EVA1BQ9NVM1 165 aa7.7□□□□□ -1.18
RFC4-211ENST00000460408 SPIRE2Q8WWL2 714 aa7.69□□□□□ -1.18
RFC4-211ENST00000460408 UNC93B1Q9H1C4 597 aa7.69□□□□□ -1.18
RFC4-211ENST00000460408 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
RFC4-211ENST00000460408 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
RFC4-211ENST00000460408 GMPRP36959 345 aa7.68□□□□□ -1.18
RFC4-211ENST00000460408 MPNDQ8N594 471 aa7.68□□□□□ -1.18
RFC4-211ENST00000460408 IRF7Q92985 503 aa7.68□□□□□ -1.18
RFC4-211ENST00000460408 FAM181BA6NEQ2 426 aa7.67□□□□□ -1.18
RFC4-211ENST00000460408 H3BM21 787 aa7.67□□□□□ -1.18
RFC4-211ENST00000460408 KCNH2Q12809 1159 aa7.67□□□□□ -1.18
RFC4-211ENST00000460408 DESI1Q6ICB0 168 aa7.67□□□□□ -1.18
RFC4-211ENST00000460408 BAP1Q92560 729 aa7.67□□□□□ -1.18
RFC4-211ENST00000460408 MOXD2PA6NHM9 499 aa7.66□□□□□ -1.18
RFC4-211ENST00000460408 NDUFV2P19404 249 aa7.66□□□□□ -1.18
RFC4-211ENST00000460408 VARSP26640 1264 aaKnown RBP7.66□□□□□ -1.18
RFC4-211ENST00000460408 PRR7Q8TB68 274 aa7.66□□□□□ -1.18
RFC4-211ENST00000460408 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.18
RFC4-211ENST00000460408 SPDYE5A6NIY4 337 aa7.65□□□□□ -1.18
RFC4-211ENST00000460408 LINC01559Q495D7 138 aa7.65□□□□□ -1.18
RFC4-211ENST00000460408 ZNF511Q8NB15 262 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms