RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 WASLO00401 505 aaPredicted RBP13.05□□□□□ -0.32
EPB41-208ENST00000460378 BTG4Q9NY30 223 aa13.05□□□□□ -0.32
EPB41-208ENST00000460378 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
EPB41-208ENST00000460378 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
EPB41-208ENST00000460378 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
EPB41-208ENST00000460378 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
EPB41-208ENST00000460378 PTPN23Q9H3S7 1636 aa13.04□□□□□ -0.32
EPB41-208ENST00000460378 LAS1LQ9Y4W2 734 aaKnown RBP13.04□□□□□ -0.32
EPB41-208ENST00000460378 TTC37Q6PGP7 1564 aa13.03□□□□□ -0.32
EPB41-208ENST00000460378 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
EPB41-208ENST00000460378 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
EPB41-208ENST00000460378 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
EPB41-208ENST00000460378 FAM98CQ17RN3 349 aaKnown RBP13.02□□□□□ -0.32
EPB41-208ENST00000460378 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
EPB41-208ENST00000460378 NOS1P29475 1434 aa13.02□□□□□ -0.33
EPB41-208ENST00000460378 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
EPB41-208ENST00000460378 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
EPB41-208ENST00000460378 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
EPB41-208ENST00000460378 PLEKHG1Q9ULL1 1385 aa13.01□□□□□ -0.33
EPB41-208ENST00000460378 ABCC1P33527 1531 aa13.01□□□□□ -0.33
EPB41-208ENST00000460378 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
EPB41-208ENST00000460378 GPR162Q16538 588 aa13.01□□□□□ -0.33
EPB41-208ENST00000460378 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
EPB41-208ENST00000460378 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
EPB41-208ENST00000460378 PZPP20742 1482 aa13□□□□□ -0.33
EPB41-208ENST00000460378 SHANK2Q9UPX8 1470 aa13□□□□□ -0.33
EPB41-208ENST00000460378 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
EPB41-208ENST00000460378 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
EPB41-208ENST00000460378 ORAI2Q96SN7 254 aa13□□□□□ -0.33
EPB41-208ENST00000460378 AK7Q96M32 723 aa13□□□□□ -0.33
EPB41-208ENST00000460378 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
EPB41-208ENST00000460378 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
EPB41-208ENST00000460378 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
EPB41-208ENST00000460378 PIK3R4Q99570 1358 aa12.99□□□□□ -0.33
EPB41-208ENST00000460378 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
EPB41-208ENST00000460378 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
EPB41-208ENST00000460378 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
EPB41-208ENST00000460378 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
EPB41-208ENST00000460378 AGLP35573 1532 aa12.97□□□□□ -0.33
EPB41-208ENST00000460378 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.33
EPB41-208ENST00000460378 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
EPB41-208ENST00000460378 C14orf93Q9H972 538 aaKnown RBP12.96□□□□□ -0.33
EPB41-208ENST00000460378 SOCS7O14512 581 aa12.96□□□□□ -0.34
EPB41-208ENST00000460378 CCDC125Q86Z20 511 aa12.96□□□□□ -0.34
EPB41-208ENST00000460378 ADGRF5Q8IZF2 1346 aa12.95□□□□□ -0.34
EPB41-208ENST00000460378 CABP4P57796 275 aa12.95□□□□□ -0.34
EPB41-208ENST00000460378 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
EPB41-208ENST00000460378 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
EPB41-208ENST00000460378 ERVK-7P63135 1459 aa12.95□□□□□ -0.34
EPB41-208ENST00000460378 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
EPB41-208ENST00000460378 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
EPB41-208ENST00000460378 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
EPB41-208ENST00000460378 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
EPB41-208ENST00000460378 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
EPB41-208ENST00000460378 SMARCC1Q92922 1105 aaPredicted RBP12.94□□□□□ -0.34
EPB41-208ENST00000460378 CALD1Q05682 793 aaKnown RBP12.93□□□□□ -0.34
EPB41-208ENST00000460378 NEUROD2Q15784 382 aa12.93□□□□□ -0.34
EPB41-208ENST00000460378 TMOD3Q9NYL9 352 aa12.93□□□□□ -0.34
EPB41-208ENST00000460378 BRINP3Q76B58 766 aa12.93□□□□□ -0.34
EPB41-208ENST00000460378 MAP3K4Q9Y6R4 1608 aa12.92□□□□□ -0.34
EPB41-208ENST00000460378 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
EPB41-208ENST00000460378 CPS1P31327 1500 aa12.91□□□□□ -0.34
EPB41-208ENST00000460378 ZPR1O75312 459 aa12.91□□□□□ -0.34
EPB41-208ENST00000460378 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
EPB41-208ENST00000460378 ACEP12821 1306 aa12.91□□□□□ -0.34
EPB41-208ENST00000460378 GGNBP2Q9H3C7 697 aa12.9□□□□□ -0.34
EPB41-208ENST00000460378 PREX2Q70Z35 1606 aa12.89□□□□□ -0.35
EPB41-208ENST00000460378 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
EPB41-208ENST00000460378 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
EPB41-208ENST00000460378 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
EPB41-208ENST00000460378 TRPM2O94759 1503 aa12.88□□□□□ -0.35
EPB41-208ENST00000460378 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
EPB41-208ENST00000460378 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
EPB41-208ENST00000460378 IL2RBP14784 551 aa12.87□□□□□ -0.35
EPB41-208ENST00000460378 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
EPB41-208ENST00000460378 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
EPB41-208ENST00000460378 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
EPB41-208ENST00000460378 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
EPB41-208ENST00000460378 FER1L4A9Z1Z3 1794 aa12.86□□□□□ -0.35
EPB41-208ENST00000460378 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
EPB41-208ENST00000460378 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
EPB41-208ENST00000460378 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
EPB41-208ENST00000460378 TRIM37O94972 964 aa12.85□□□□□ -0.35
EPB41-208ENST00000460378 ARHGEF5Q12774 1597 aa12.85□□□□□ -0.35
EPB41-208ENST00000460378 RFC4P35249 363 aa12.85□□□□□ -0.35
EPB41-208ENST00000460378 KDM5CP41229 1560 aa12.85□□□□□ -0.35
EPB41-208ENST00000460378 MTHFSP49914 203 aa12.85□□□□□ -0.35
EPB41-208ENST00000460378 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
EPB41-208ENST00000460378 DIAPH1O60610 1272 aaKnown RBP12.84□□□□□ -0.35
EPB41-208ENST00000460378 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
EPB41-208ENST00000460378 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
EPB41-208ENST00000460378 ZMYM4Q5VZL5 1548 aa12.84□□□□□ -0.35
EPB41-208ENST00000460378 GCP02774 474 aa12.84□□□□□ -0.35
EPB41-208ENST00000460378 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
EPB41-208ENST00000460378 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
EPB41-208ENST00000460378 DIEXFQ68CQ4 756 aaKnown RBP12.84□□□□□ -0.35
EPB41-208ENST00000460378 CEP170BQ9Y4F5 1589 aaPredicted RBP12.83□□□□□ -0.35
EPB41-208ENST00000460378 PHF14O94880 888 aa12.83□□□□□ -0.36
EPB41-208ENST00000460378 DIP2CQ9Y2E4 1556 aa12.83□□□□□ -0.36
EPB41-208ENST00000460378 STARD3NLO95772 234 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 492.7 ms