RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 DLC1Q96QB1 1528 aa19.79■□□□□ 0.76
PCNP-202ENST00000460231 TECPR2O15040 1411 aa19.78■□□□□ 0.76
PCNP-202ENST00000460231 KCNA6P17658 529 aa19.78■□□□□ 0.76
PCNP-202ENST00000460231 YTHDC1Q96MU7 727 aaKnown RBP19.78■□□□□ 0.76
PCNP-202ENST00000460231 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
PCNP-202ENST00000460231 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.78■□□□□ 0.76
PCNP-202ENST00000460231 CPS1P31327 1500 aa19.77■□□□□ 0.76
PCNP-202ENST00000460231 KNDC1Q76NI1 1749 aa19.77■□□□□ 0.76
PCNP-202ENST00000460231 LMTK3Q96Q04 1460 aa19.76■□□□□ 0.75
PCNP-202ENST00000460231 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
PCNP-202ENST00000460231 CDK19Q9BWU1 502 aa19.75■□□□□ 0.75
PCNP-202ENST00000460231 NPHP4O75161 1426 aaPredicted RBP19.74■□□□□ 0.75
PCNP-202ENST00000460231 SRPK2P78362 688 aaKnown RBP19.74■□□□□ 0.75
PCNP-202ENST00000460231 CC2D1BQ5T0F9 858 aaKnown RBP19.74■□□□□ 0.75
PCNP-202ENST00000460231 EVC2Q86UK5 1308 aa19.74■□□□□ 0.75
PCNP-202ENST00000460231 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
PCNP-202ENST00000460231 NUTM2FA1L443 756 aa19.73■□□□□ 0.75
PCNP-202ENST00000460231 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
PCNP-202ENST00000460231 DIP2AQ14689 1571 aa19.7■□□□□ 0.74
PCNP-202ENST00000460231 CDCA8Q53HL2 280 aa19.7■□□□□ 0.74
PCNP-202ENST00000460231 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
PCNP-202ENST00000460231 CHD2O14647 1828 aaKnown RBP19.69■□□□□ 0.74
PCNP-202ENST00000460231 AMER1Q5JTC6 1135 aaPredicted RBP19.69■□□□□ 0.74
PCNP-202ENST00000460231 CD163L1Q9NR16 1453 aa19.68■□□□□ 0.74
PCNP-202ENST00000460231 WASLO00401 505 aaPredicted RBP19.67■□□□□ 0.74
PCNP-202ENST00000460231 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
PCNP-202ENST00000460231 STRCQ7RTU9 1775 aa19.66■□□□□ 0.74
PCNP-202ENST00000460231 SIRT1Q96EB6 747 aa19.66■□□□□ 0.74
PCNP-202ENST00000460231 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
PCNP-202ENST00000460231 A0A1W2PP64 1363 aa19.64■□□□□ 0.74
PCNP-202ENST00000460231 STRCP1A6NGW2 1772 aa19.64■□□□□ 0.73
PCNP-202ENST00000460231 NSD3Q9BZ95 1437 aa19.63■□□□□ 0.73
PCNP-202ENST00000460231 PARD3Q8TEW0 1356 aa19.62■□□□□ 0.73
PCNP-202ENST00000460231 CCER2I3L3R5 266 aa19.61■□□□□ 0.73
PCNP-202ENST00000460231 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
PCNP-202ENST00000460231 ATP7BP35670 1465 aa19.61■□□□□ 0.73
PCNP-202ENST00000460231 SLC24A1O60721 1099 aa19.61■□□□□ 0.73
PCNP-202ENST00000460231 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
PCNP-202ENST00000460231 PIK3R4Q99570 1358 aa19.61■□□□□ 0.73
PCNP-202ENST00000460231 RGPD8O14715 1765 aaPredicted RBP19.61■□□□□ 0.73
PCNP-202ENST00000460231 USP32Q8NFA0 1604 aa19.6■□□□□ 0.73
PCNP-202ENST00000460231 NALCNQ8IZF0 1738 aa19.6■□□□□ 0.73
PCNP-202ENST00000460231 ADGRB2O60241 1585 aa19.59■□□□□ 0.73
PCNP-202ENST00000460231 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
PCNP-202ENST00000460231 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
PCNP-202ENST00000460231 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
PCNP-202ENST00000460231 KTN1Q86UP2 1357 aaKnown RBP19.59■□□□□ 0.73
PCNP-202ENST00000460231 ANKRD36BQ8N2N9 1353 aa19.59■□□□□ 0.73
PCNP-202ENST00000460231 PPIP5K1Q6PFW1 1433 aa19.58■□□□□ 0.72
PCNP-202ENST00000460231 MRS2Q9HD23 443 aa19.57■□□□□ 0.72
PCNP-202ENST00000460231 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
PCNP-202ENST00000460231 TNNT2P45379 298 aaPredicted RBP19.55■□□□□ 0.72
PCNP-202ENST00000460231 NWD1Q149M9 1564 aa19.54■□□□□ 0.72
PCNP-202ENST00000460231 PMFBP1Q8TBY8 1022 aa19.53■□□□□ 0.72
PCNP-202ENST00000460231 ZRANB1Q9UGI0 708 aa19.53■□□□□ 0.72
PCNP-202ENST00000460231 MYBBP1AQ9BQG0 1328 aaKnown RBP19.53■□□□□ 0.72
PCNP-202ENST00000460231 FBLN1P23142 703 aa19.53■□□□□ 0.72
PCNP-202ENST00000460231 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
PCNP-202ENST00000460231 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
PCNP-202ENST00000460231 RALBP1Q15311 655 aa19.52■□□□□ 0.72
PCNP-202ENST00000460231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.52■□□□□ 0.72
PCNP-202ENST00000460231 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
PCNP-202ENST00000460231 TOPAZ1Q8N9V7 1692 aa19.52■□□□□ 0.71
PCNP-202ENST00000460231 ZNF335Q9H4Z2 1342 aaPredicted RBP19.52■□□□□ 0.71
PCNP-202ENST00000460231 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
PCNP-202ENST00000460231 PPP2R1AP30153 589 aa19.51■□□□□ 0.71
PCNP-202ENST00000460231 FYB1O15117 783 aa19.5■□□□□ 0.71
PCNP-202ENST00000460231 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
PCNP-202ENST00000460231 ACEP12821 1306 aa19.48■□□□□ 0.71
PCNP-202ENST00000460231 CDC42BPGQ6DT37 1551 aa19.48■□□□□ 0.71
PCNP-202ENST00000460231 NPC1L1Q9UHC9 1359 aa19.48■□□□□ 0.71
PCNP-202ENST00000460231 NINLQ9Y2I6 1382 aa19.48■□□□□ 0.71
PCNP-202ENST00000460231 FMN2Q9NZ56 1722 aa19.48■□□□□ 0.71
PCNP-202ENST00000460231 ADGRL3Q9HAR2 1447 aa19.47■□□□□ 0.71
PCNP-202ENST00000460231 TERF2IPQ9NYB0 399 aa19.47■□□□□ 0.71
PCNP-202ENST00000460231 NME9Q86XW9 330 aa19.47■□□□□ 0.71
PCNP-202ENST00000460231 TMEM94Q12767 1356 aa19.47■□□□□ 0.71
PCNP-202ENST00000460231 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
PCNP-202ENST00000460231 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
PCNP-202ENST00000460231 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
PCNP-202ENST00000460231 HDGFL2Q7Z4V5 671 aaPredicted RBP19.45■□□□□ 0.7
PCNP-202ENST00000460231 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
PCNP-202ENST00000460231 AKAP12Q02952 1782 aa19.45■□□□□ 0.7
PCNP-202ENST00000460231 XIRP1Q702N8 1843 aaKnown RBP19.44■□□□□ 0.7
PCNP-202ENST00000460231 MON2Q7Z3U7 1717 aa19.44■□□□□ 0.7
PCNP-202ENST00000460231 PLEKHG3A1L390 1219 aa19.43■□□□□ 0.7
PCNP-202ENST00000460231 ORAI2Q96SN7 254 aa19.43■□□□□ 0.7
PCNP-202ENST00000460231 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
PCNP-202ENST00000460231 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
PCNP-202ENST00000460231 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
PCNP-202ENST00000460231 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
PCNP-202ENST00000460231 KIF20BQ96Q89 1820 aa19.4■□□□□ 0.7
PCNP-202ENST00000460231 USP6P35125 1406 aa19.39■□□□□ 0.69
PCNP-202ENST00000460231 EDC4Q6P2E9 1401 aaKnown RBP19.39■□□□□ 0.69
PCNP-202ENST00000460231 XPCQ01831 940 aaPredicted RBP19.39■□□□□ 0.69
PCNP-202ENST00000460231 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
PCNP-202ENST00000460231 SSH2Q76I76 1423 aa19.39■□□□□ 0.69
PCNP-202ENST00000460231 ESCO1Q5FWF5 840 aa19.38■□□□□ 0.69
PCNP-202ENST00000460231 POLR3AO14802 1390 aaPredicted RBP19.37■□□□□ 0.69
PCNP-202ENST00000460231 TTC21BQ7Z4L5 1316 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms